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LOCUS XM_017137573 4125 bp mRNA linear INV 09-DEC-2024 delta 1 subunit-like garnet (g), mRNA. ACCESSION XM_017137573 VERSION XM_017137573.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137573.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4125 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4125 /gene="g" /note="adaptor-related protein complex 3, delta 1 subunit-like garnet; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108054555" CDS 197..3295 /gene="g" /codon_start=1 /product="AP-3 complex subunit delta" /protein_id="XP_016993062.2" /db_xref="GeneID:108054555" /translation="MALKKVKGNFFERMFDKNLTDLVRGIRNNKDNEAKYISTCIEEI KQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQC FHPDSELLMLTTNMIRKDLNSQNQYDAGVALSGLSCFISPDLSRDLANDIMTLMSSTK PYLRMKAVLMMYKVFLRYPEALRPAFPKLKEKLEDPDPGVQSAAVNVICELARKNPKN YLPLAPIFFKLMTTSTNNWMLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSL LYECINTVIAVLISISSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKT HPKSVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSA YRDELLYKVIEICAQSSYLYVTNFEWYLTVLVELIQLEAGSRHGRLIAEQLLDVAIRV PVVRQFAVNEMTNLLDTFTVSAQSNSMYEVLYAAAWIVGEFAGELEDAEKTLNILLRP RQLPGHIQGVYVQNVIKLFARLATTCLEVQDLPGLVRLCDHVLDKLQHFNGSSDIEVQ ERANSACMLIEMLRNQLATTDDAMDTGCIPPLAIEIVQEMTLLFAGELIPVAPKAQRK VPLPDGLDLDEWINAPPPEDAASSSSSEHDKDELFVSASQGGAGVEGGGGGGGSGGKR RQSLELTPEQLERQRMARLMEQSNNPHYLKSTPTASGGSANADQYDNIDDIPITELPL DMEGVAALRVGITKRSDKYLQEQQAAAQGGKDGKKKHKKGKKSKKAKNKVAYNSSSES EGEPKPLHIVNTTLDMPEGVSLSDSEDKDGKYDPNDPHRALDIELDITDFEAPAVRSS SSKKSTTGKENLKAPAELAGSSSSSKKDRKKDKDKEKERKKHREGRRERSAQPVIDLI DADTPTPSPSHTSAPSNDNNNTSSLLPADVARQHKKKKNKEKSREAAPESGILNVLEE EGEVEQQVASKAHKKKHKKEKSQRKEKKASDSASASVIAGISSSDYEQPLGISTPSKE IF" misc_feature 293..1930 /gene="g" /note="Adaptin N terminal region; Region: Adaptin_N; pfam01602" /db_xref="CDD:396262" misc_feature 2261..2728 /gene="g" /note="AP-3 complex subunit delta-1; Region: AP3D1; pfam06375" /db_xref="CDD:461889" polyA_site 4125 /gene="g" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttttgtgcca ccaccactgc tggtgttaaa ttaaagaaaa cgaaaacaaa tcggaaaaag 61 acggaagtga gtgcctttct gctgccgccg gtgctgtgct gagatcgcct cgccaaaata 121 gtcaaagtcc tcgagagcga gagataccga ttgcagagcg tcgcaaggaa aaacagaacc 181 aacagctaga gcaaacatgg cactgaagaa agtgaagggt aactttttcg agcgtatgtt 241 tgataaaaac ctcaccgatt tggtgcgcgg cattcggaac aacaaggata atgaggccaa 301 atacatatcg acgtgcatcg aggagatcaa acaggagctg cgacaggaca atatcagtgt 361 caagtgcaat gcagtggcca agctgaccta catacaaatg ctgggctacg acatctcctg 421 ggcaggcttc aacatcatcg aggtgatgag ctcatccaga ttcacctgca agcgaattgg 481 ctacctggcg gccagtcaat gcttccatcc ggatagtgag ctcctcatgc tgaccaccaa 541 tatgatacgc aaggatctca actcacagaa ccaatacgat gcgggtgtgg cgttgagtgg 601 actaagctgc ttcatatcac ccgatctgtc ccgcgatttg gccaacgata ttatgacact 661 gatgagctca acaaaaccgt atctgcgcat gaaagccgtc cttatgatgt ataaagtatt 721 tttacgctat cccgaagcat tgagacctgc atttcccaaa ctcaaggaga aactggagga 781 cccagatcca ggtgttcaat cggctgccgt taatgttatt tgcgagttag cgcgtaaaaa 841 tcctaaaaat tacctgcccc tggcgccgat cttcttcaag ctcatgacca catcgaccaa 901 caactggatg ctgatcaaga tcatcaagct gtttggcgct ttaaccccct tagaaccccg 961 gctaggaaag aaattaatag aaccactcac aaatctaatt catagcacct cggcgatgag 1021 tctcctgtac gagtgcatca acacggtgat cgcggtgcta atcagcatca gcagcggcat 1081 gcccaaccac agtgcctcca tccagctctg cgtgcagaag ctccgcatcc ttatcgagga 1141 ttccgaccag aacctgaaat accttggact gttggccatg tcgaagatcc tgaagacgca 1201 cccgaagagc gtgcaggcgc acaaggacct aattctcgcg tgcctggacg acaaggacga 1261 gtcgatccga ctgcgcgccc tcgacctgct gtacggcatg gtctcgaaga agaacctcat 1321 ggagatcgtt aagcgtctgc tcggccacat ggagcgggcg gagggctcgg cctaccggga 1381 cgaattgctc tacaaggtga tcgagatctg cgcccagagt tcctacctgt acgtgaccaa 1441 cttcgagtgg tatctcaccg tgctcgtgga gctcattcag ctggaggctg gctcacggca 1501 cggccgcctg attgccgagc aactcctgga cgtggccatt cgcgtgccag tggtgcggca 1561 attcgccgtc aacgagatga ccaacctgct ggacacgttc accgtctcgg cgcagagcaa 1621 ctccatgtac gaggtgctct acgcggccgc ctggattgtg ggcgagtttg ccggcgagct 1681 ggaggatgcg gagaagacgc tcaacatcct gctgcgtccg cggcagctgc ccggtcacat 1741 ccagggtgtc tacgtgcaga acgtgatcaa gctgtttgcc cgcctggcca ccacatgtct 1801 ggaggttcag gatttgccgg gattagtgag gctctgcgat catgtactcg ataaactgca 1861 acacttcaat ggctccagcg acattgaggt gcaggagcga gccaactcgg cttgcatgct 1921 gatcgagatg ctgcgcaacc aactggccac gacggacgat gccatggaca cgggctgcat 1981 tccgccactg gccattgaga ttgtccagga gatgacgctg ctgttcgctg gcgagctgat 2041 accggtggcg cccaaggcgc aaaggaaggt gccgctgccg gatggcctgg atttggacga 2101 gtggatcaac gcaccgccgc cggaggatgc ggcgagcagt tcgtcctcgg agcacgacaa 2161 ggacgagctc ttcgtcagcg cctcgcaagg cggcgcgggc gtggagggag gcggcggtgg 2221 cggaggaagt ggcggcaagc ggcgacagag cctggaactg acgcccgagc aactggagcg 2281 ccagcggatg gcgcgtctca tggagcagtc gaacaatccc cactacctca agtccacgcc 2341 gacggcgagc ggagggtcgg cgaatgcgga tcagtacgac aatatcgacg acattcccat 2401 cacggagctg ccgctggaca tggagggcgt ggctgcgctg cgggtgggca ttaccaagcg 2461 atcggataaa tacctgcagg agcagcaggc ggcggcgcag ggcggcaagg atggcaagaa 2521 gaagcataaa aagggcaaga agagcaaaaa ggctaagaac aaagtggcat acaacagcag 2581 ctccgagtcg gaaggagaac cgaagcccct gcatattgtg aacaccacgc tggacatgcc 2641 cgagggggtt tccctgtcgg acagcgagga caaggacggc aagtacgatc cgaatgaccc 2701 gcatcgagcg ctggacattg agctggatat aacggacttc gaggcgcccg ccgtgaggtc 2761 ctcctcctcc aagaagtcga cgacgggcaa agagaatctc aaggcgccgg ctgagctggc 2821 cggcagcagt agcagctcca agaaggatcg gaaaaaggac aaggataagg agaaggagcg 2881 gaagaagcat cgggagggca ggcgggaaag gagcgcccag ccggtgattg atctcatcga 2941 cgccgacacg cccactccca gtcccagcca cacttccgcc cccagcaacg acaacaacaa 3001 tacttcaagc ctccttccag ccgatgtcgc caggcaacac aaaaagaaga agaacaagga 3061 gaagtcgcgg gaagcggcgc ccgaaagcgg catccttaat gtgctggaag aggaggggga 3121 ggtggagcag caggtggcct ccaaggcgca caagaagaag cataaaaagg agaagtcgca 3181 gcgcaaggag aagaaggctt ccgactctgc atccgcatcc gtaatcgccg gcatttcgtc 3241 cagcgactac gaacagccac tgggaatctc aacgcccagc aaagagattt tttaattgct 3301 aagctccaag ttccactatt ataattatta ttaatatgta cgattgtgag gaacctctgt 3361 ttttcccgtg tgtcgattca ttgcgcgttt atttgaaaaa gaaaagggag cagcgaagcg 3421 agcttcagac tttccaattt catcaagttg aaacaattgc ctcctataga aaagaaaacc 3481 taacaaatta tcgctgcgat ataaaaacat aacaaacatt gaacaaattt aaatgctaac 3541 aaaaaaaaaa aagaaaacta aatcaacata aaccgtatat atgtatacat aaatattaat 3601 atatagaact gtaattttaa agtgtaaaat gccgccagtc tgccaattgc ggcttaaaaa 3661 aagaaacaag caacaaacgg aaaacagaaa acagatcaac tataaatcat aattctacgc 3721 cgatcgattc ctgtgtacta tctatttttg atgaatttgt agcctagagc atgcgattcc 3781 actaaaaaca cacccacaaa acacagacaa ttatatacct atagttatat aatatggaat 3841 tttataatga atcccacaca gaatagagct aactgagctg catggattgt aaagaacccg 3901 aattatatat gtatgtatac acgtgaacca tgtgaatcaa atataaagta ctgctatacc 3961 ataattactg aacaactgag acagaaacgg aaacggaaca gaagctaagt gaaattatac 4021 atacatagta catacatgct atattatata caagaaccca cacacataca cacacctaca 4081 aatacataca aatatataaa cgttaaataa atgaaaagta catta