PREDICTED: Drosophila takahashii tenascin (LOC108054552), mRNA.

LOCUS       XM_017137571            1128 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017137571
VERSION     XM_017137571.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137571.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1128
                     /gene="LOC108054552"
                     /note="tenascin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:108054552"
     CDS             55..1053
                     /gene="LOC108054552"
                     /codon_start=1
                     /product="tenascin"
                     /protein_id="XP_016993060.2"
                     /db_xref="GeneID:108054552"
                     /translation="MQAMHSWILILLAGLPAVFRAEDLLELSCTSDAQCAQFERGRCV
                     DLTCVCTARGSGERVACAPLEEKVTNIIGGPCPCPMPDALCHVKWQQCLCAQGFVPSE
                     DRRRCLPAVVPLGGACEFQRQCQLAERFSSCSARQCLCPANFELHKGHCLAVLQSKCT
                     LDKDCGSCGASICLTKLGKCGCAAHFVHNHNMTKCIGGSGFGESCEHSSPCKIHLGPG
                     GRCLDHLCVCGASYYPKMSKEEQEDQEQEKQRITCQPIVPFGALCHHDGDCRMQRISQ
                     ENLTVPAASMVCKYGECSCSETHRLEDNRCIFVESGALGKRLLLPLLLLQFTMILY"
     polyA_site      1128
                     /gene="LOC108054552"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgatttccag cgcagtcgtc caacgtgcat cgaatcgacc caagatcaac cgaaatgcag
       61 gcgatgcaca gctggatcct aattctgctg gctggacttc cggctgtttt ccgggcggag
      121 gacctgctgg agctgtcctg cacctcggac gcccagtgcg cccagttcga aaggggtcgc
      181 tgcgtggacc tcacctgcgt ctgcacggca cgtggctccg gcgagcgggt ggcctgtgcg
      241 ccactggagg agaaggtgac caacatcatc ggcggcccct gtccgtgtcc catgccggac
      301 gccctgtgcc acgtgaagtg gcagcagtgc ctctgcgccc agggcttcgt gcccagcgag
      361 gatcggcgcc gctgcctgcc ggcggtcgtc ccgctgggcg gcgcctgcga gttccagcgg
      421 cagtgccagc tggccgagcg cttcagctcc tgctccgccc gccagtgcct ctgtcccgcc
      481 aacttcgagc tccacaaggg ccactgcctg gccgtattgc aatccaaatg caccttggac
      541 aaggactgtg gcagctgtgg cgcctcgatt tgcctcacga agttgggcaa atgcggctgt
      601 gcggcgcact ttgtgcacaa ccacaacatg accaagtgca tcggtggctc cggattcggc
      661 gagagctgcg agcacagttc gccatgcaag attcacctgg gcccgggtgg ccgctgcctg
      721 gatcatctct gcgtctgtgg ggcctcctac tatcctaaaa tgtccaagga ggagcaggag
      781 gatcaggagc aggagaagca gcgcatcacc tgccaaccca tcgtgccctt tggcgccctc
      841 tgtcaccacg atggcgactg ccggatgcag cgaatctccc aggagaatct cacagttcca
      901 gctgcctcaa tggtctgcaa atacggcgaa tgcagctgca gcgaaaccca tcgactggag
      961 gacaacaggt gcatcttcgt ggagagtggc gccctgggaa agcgactcct attacccctt
     1021 ctccttctcc agtttacaat gattctttat tagcatacgt agattataca aagggtatag
     1081 caaaacacaa aaaaaatata gcaaaaactt gttgaattta aaatataa