PREDICTED: Drosophila takahashii Yolk protein 3 (Yp3), mRNA.

LOCUS       XM_017137564            1487 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017137564
VERSION     XM_017137564.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137564.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1487
                     /gene="Yp3"
                     /note="Yolk protein 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:108054548"
     CDS             60..1322
                     /gene="Yp3"
                     /codon_start=1
                     /product="vitellogenin-3"
                     /protein_id="XP_016993053.1"
                     /db_xref="GeneID:108054548"
                     /translation="MMSLRLCLLATCLLVAAHASKDGANMQLKPTKWLTASDLESVPS
                     LNDITWERLENQPLEQGAKLIEKIYHVGQIKHDLTPSFVPSPSNVPVWIVKSNGQKVE
                     CKLNNYVETAKAQPGFGEDEVTIVLTGLPQNSNAQKKAMRKLVQAYVQKYNLQQLQKN
                     AQEQQQQQKSSDYDYTSSEEAADQWKSAKAASGDLIIIDLGSTLTNFKRYAMLDVQNT
                     GAMIGQTLIELTNKGVPQEIIHLIGQGISAHVAGAAGNKFTAQTGHKLRRITGLDPAK
                     VLSKRPQTLGGLSRGDADFVDAIHTSTFAMGTPIRCGDVDFYPNGPSTAVPGAENVIE
                     AVARATRYFAESVRPGSERNFPAVPANSLKQYKEQDGFGKRAYMGLQTDFDLRGDYIL
                     EVNPKSPFGQRSPAHKQAAYHGVHQARN"
     misc_feature    438..1259
                     /gene="Yp3"
                     /note="Region: Lipase; pfam00151"
                     /db_xref="CDD:395099"
     polyA_site      1487
                     /gene="Yp3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caacgtttgg cccgatctga tctgatctga tctgaaaaaa cccggttccc ctcagcaaaa
       61 tgatgagtct ccgcctctgc ctgctggcca cctgcctcct ggtggcggcc catgcctcca
      121 aggatggcgc caacatgcag ctgaagccca ccaagtggct gaccgcctcc gatctggaga
      181 gcgtgccctc cctcaacgac atcacctggg agcgtttgga gaaccagcct ttggagcagg
      241 gagccaagct gatcgagaag atctaccacg ttggccaaat caagcacgat ctgaccccca
      301 gctttgtgcc cagcccaagc aacgtgcccg tctggatcgt caagtccaac ggccagaagg
      361 tcgagtgcaa gctgaacaac tacgtggaga ccgccaaggc ccagcccggt ttcggtgagg
      421 atgaggtcac catcgtcctg accggcctgc cccagaacag caacgcccag aagaaggcca
      481 tgcgcaagct ggtccaggcc tacgtccaga agtacaacct ccagcagctg cagaagaacg
      541 cccaggagca gcagcagcag cagaagagca gcgactacga ctacaccagc agcgaggagg
      601 ccgccgatca gtggaaatcg gccaaggccg ccagcggcga tttgatcatc atcgacctcg
      661 gctccaccct gaccaacttc aagcgctacg ccatgctgga tgtgcagaac accggcgcca
      721 tgatcggcca gaccctgatc gagctgacca acaagggagt gccccaggag atcatccatc
      781 tgatcggcca gggaatcagc gcccatgtgg ccggagctgc cggcaacaag ttcaccgccc
      841 aaacgggcca caagctgcgc cgcatcaccg gtctggaccc cgccaaggtg ctgtccaagc
      901 gtccccagac cctcggcggt ctgtcccgcg gcgatgccga cttcgttgat gccatccaca
      961 cctcgacctt cgccatgggc acccccatcc gttgcggcga cgtggacttc tacccgaatg
     1021 gaccctcgac ggcggttccc ggcgctgaga atgtgatcga ggctgtggcc cgtgccaccc
     1081 gctactttgc cgagtccgtg cgtcccggca gcgagcgcaa cttccccgcc gtgccggcca
     1141 actccctgaa gcagtacaag gagcaggatg gcttcggcaa gcgcgcctac atgggtctgc
     1201 agaccgactt cgatctgcgc ggcgactaca tcctcgaggt caaccccaag agccccttcg
     1261 gccagcgcag ccccgcccac aagcaggccg cctaccacgg cgtccaccag gcccgcaact
     1321 agggatccac gtcccccgat ggttggatgg aacccgtgca gctcctgata ctcagagaaa
     1381 tccgcaaaac gtaggctagc ttagaaaatc cataaaacaa acgaaaaaac aaaaaatact
     1441 tcaaaaactc cataaaaata aaagctgcaa attaactaaa aataaaa