PREDICTED: Drosophila takahashii chronophin-like (LOC108054436),

LOCUS       XM_017137401            1478 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X2, mRNA.
ACCESSION   XM_017137401
VERSION     XM_017137401.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137401.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1478
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1478
                     /gene="LOC108054436"
                     /note="chronophin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:108054436"
     CDS             182..1123
                     /gene="LOC108054436"
                     /codon_start=1
                     /product="chronophin-like isoform X2"
                     /protein_id="XP_016992890.2"
                     /db_xref="GeneID:108054436"
                     /translation="MEEGNGVKHILELSEDERRNFVDSFDRVFSDIDGVLWTLKDPVP
                     RAAEGYAALERRGKQLTYVTNNSVLAEEQCLKRFAKIGMKVQPEQIWHPAKSIAAYLS
                     GIKLEGLIYVIASQPFKEVMREAGFHILDGPNESIEGSFASLAEHIFDRQEVRAVVID
                     VDFNLSYPKLARAHQYLRHPDCLLIGGATDILLPVAKDVNILGPGAFASMLADASGRP
                     LEAITLGKPGRQLGDLLIGHLKIEQPSRVLMIGDMLAQDIGFGRQCGFQTLLVLSGGC
                     TRAEFLGEKDPARLPDFYADSVADVAQLLDGAPRAHV"
     misc_feature    260..1081
                     /gene="LOC108054436"
                     /note="haloacid dehalogenase-like superfamily
                     phosphatases, UmpH/NagD family; Region:
                     HAD_Pase_UmpH-like; cd07508"
                     /db_xref="CDD:319811"
     misc_feature    order(272..286,368..379,749..751,857..859,932..940,
                     947..952)
                     /gene="LOC108054436"
                     /note="active site"
                     /db_xref="CDD:319811"
ORIGIN      
        1 tgttctatct gggatctttg acgcctcgct ttgaggtgct aatttagact cagtctctgt
       61 tccatagttt cagtttctcg gctccacttt caatttgcgt tttaatttca gctgtcgcca
      121 ttcggcgacg ttagtttgcc gacaaccgtg cccacgataa cagctttcgc atcggatttc
      181 aatggaggag ggtaatgggg tcaaacacat tctagagctg agcgaggatg agcggcgcaa
      241 ctttgtggac tccttcgacc gggtgttcag cgacatagac ggtgtcctgt ggaccctgaa
      301 ggatccggtg ccgcgggccg ccgagggata cgctgccctc gagcggaggg gcaaacagtt
      361 gacctatgtg accaacaaca gcgtgctggc ggaggagcag tgcctcaagc gcttcgccaa
      421 gatcgggatg aaggtgcagc cggagcagat ctggcatccg gccaagtcca tcgcagccta
      481 tctgagcggc attaagctcg agggcctcat ctacgtcatc gccagccagc cgtttaagga
      541 agtaatgcgc gaagcgggtt tccacatact ggacggaccc aacgagtcca tcgagggaag
      601 cttcgccagc ctggcggagc acattttcga ccggcaggag gtgcgcgccg tggtcatcga
      661 cgtggacttc aacctgagct atcccaagtt ggctcgagcg catcagtatc tgcgtcatcc
      721 ggattgcctg ctgattggcg gcgccaccga tatcctgctg cccgtggcca aggacgtgaa
      781 tatcctggga ccgggggcgt ttgcttccat gctggcggat gccagtggca ggccattaga
      841 agccattaca ctgggcaaac cgggacgcca gctgggcgac ctgctcatcg gtcatctcaa
      901 gatcgagcag cccagtcggg tgctcatgat cggcgacatg ttggcccagg acattggctt
      961 tggccgccag tgcggcttcc agacgctgct cgtcctcagc ggcggctgca cgcgggcgga
     1021 gttcctcggg gagaaggatc ccgcccgcct gccggacttc tatgcggaca gcgtggccga
     1081 tgtggctcag ctgttggacg gcgcacccag ggcacatgtc taattaatct ctaatttata
     1141 atttatccct tttccgagga ttgaagtttc cttggaatat atgcatgacc atcttgcaag
     1201 tcccatttgt atctataggc atttaatatt taatattaag tccttgccat attatttagc
     1261 cttttttttc atttttctat tgtaattttc agtgaattct taagattttt tttttgcctg
     1321 aaggtaaaaa ttatttcatt atttcaaacg aatgaaattg gttagctttg aagaaccata
     1381 atattgtatt attcgtattg tattgtaatg aatactttat taatataatt tttaaaaata
     1441 tttaatttaa atcgttctat ctagcattat tgtttttt