Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii protein SREK1IP1 (LOC108054429),


LOCUS       XM_017137394            1285 bp    mRNA    linear   INV 09-DEC-2024
            mRNA.
ACCESSION   XM_017137394
VERSION     XM_017137394.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137394.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1285
                     /gene="LOC108054429"
                     /note="protein SREK1IP1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108054429"
     CDS             130..975
                     /gene="LOC108054429"
                     /codon_start=1
                     /product="protein SREK1IP1"
                     /protein_id="XP_016992883.2"
                     /db_xref="GeneID:108054429"
                     /translation="MNFPLASANNKESLRAACKKCGYAGHLTYQCRNFLKVDPNKEIL
                     LDVESTSSDSELDYLTPLTELRAQELKSGNSAANPADALHPPSLPLEKKQPKKKQPKK
                     KHKKRSSNSKDKEKEKSLRKHKKQHHSKKSRKHKLKSSLEQLQQQSKTKTTGKRPSSG
                     SSSKKSKRRRSSSTSEESSSSSSSSSSSSSSSSSEDSDSDSEDSTSTSDSSDNEESST
                     SESDEYGRKKKRQGKYKRKSSDNSAMLRRKKTKVKRKRHRAGGSGGPQAGSSYLSSLS
                     DSSTY"
     misc_feature    163..>228
                     /gene="LOC108054429"
                     /note="Zinc knuckle; Region: zf-CCHC_3; pfam13917"
                     /db_xref="CDD:404753"
     polyA_site      1285
                     /gene="LOC108054429"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccccccgcct ggtcgcacta aaatcgctct gctttttttt agttgttgtg aattaaatta
       61 attaatgctg atttaagcga atttaagcaa tttcgaggct gtgcgaagag ccggtcaagc
      121 ggtttagcca tgaatttccc gctggcgagc gccaacaaca aggagagcct gcgggcggcc
      181 tgcaagaaat gcggctacgc cggtcacctg acttatcaat gccgcaattt tctcaaggtg
      241 gatccgaaca aggagatact gctggatgtg gagagcacca gttcggattc ggagctggat
      301 tacctcacgc cgctcacgga gttgcgggcc caggagctga aaagcggcaa cagcgccgcc
      361 aatccagcgg atgcactgca tcctccatcg cttcccttgg agaaaaagca gccgaagaag
      421 aagcagccca agaagaagca caagaagagg agcagcaata gcaaagataa ggagaaggag
      481 aaatccctga ggaagcacaa gaagcaacac cacagcaaga aaagcaggaa gcacaaatta
      541 aaatccagtt tggagcaact gcagcagcag agtaaaacca aaacaacggg caagcgaccc
      601 agcagcggca gcagcagcaa aaagagcaag agacgccggt catcctccac cagcgaggaa
      661 tcctccagta gcagcagctc ctcctcatcc tcctccagtt cctcctcttc agaggattcc
      721 gactctgata gcgaggatag cacctccacc agcgattcca gcgacaacga ggagagcagc
      781 accagcgaat ccgatgagta tgggcgcaaa aagaagcgac aaggcaaata caagcgcaaa
      841 tcctcggaca actcggccat gctgcgtcgc aagaagacca aggtgaagcg gaagcgacat
      901 cgcgccggcg gctctggtgg cccacaggcg ggcagcagct acctgagcag cctcagcgac
      961 agcagcacct actgattacc gattagaatg agaatctgca tctgaatctg gatacacaac
     1021 agctgcctcc aaaaacaagc actcgcctag ttcgatttcc gtttagccgt aaagttaaaa
     1081 aataataaca ggggaggatg acgaacctcc gccctcttcc acacacagag actgcctcca
     1141 gttatcctat cccccgatat acaaaaaaca taaaaactct tccccggatc acgaaaagca
     1201 aacactaaac cctagacttg tcctagccct taagtttcca gcctaaagtg ctgcaaatac
     1261 aacaaattag tttgtacaag aggaa