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LOCUS XM_017137389 2678 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_017137389 VERSION XM_017137389.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137389.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2678 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2678 /gene="Cdc7" /note="Cdc7 kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054426" CDS 262..2166 /gene="Cdc7" /codon_start=1 /product="cell division cycle 7-related protein kinase" /protein_id="XP_016992878.2" /db_xref="GeneID:108054426" /translation="MADRVMCQELATPGSHHYRRPKSNGLAASPHQMVYANGGGSWRA APRNQRLPGTGNKYMGKSSVVEEQQQQAAESEMLATPRTPKQSRNKSEDAINDLLVRI PDIGKLFDVHSRIGNGTFSTVLLGTLRRESHLPDSLRRKFAIKHHIPTSHPDRIMKEL QCMTKMGGTENVVGIHCCLRCDASAAFVMPYMAHDRFHDFYTRMDVPEIRLYMRNLLV ALRHVHKFDVIHRDVKPSNFLYNRRRREFLLVDFGLAQHVNPPPAMGSSSAVVNSHNN SKRPRERDAMEAVQQQIAPADAGLGGAVKRMRLQEDVSKMPLKPVNDIAEQHQQQDGS NPVQPVQQPVQQGQQQQVDQAPSSSGSKYNTNRNAAGSSNANNAKCFCFANPSVCLNC LMKKEVHASRAGTPGYRPPEVLLKYPDQTTAVDVWAAGVIFLSIMSSVYPFFKAPNDF IALAEIVTIFGDQAIRKTALALERMITLSQRSRPLNLRKLCLRFRHRSVFSDAKLLKS HESVDGRCEVCRNCDQYFFNCLCEDSEYLTEPLDAYECFPASAYDLLHRLLEINPHKR ITADEALQHPFFTAAEEGEQTTGDQEADGTPRKIRRQRYHNHKTVAATPEQLKQQVAL DLQQSAINKL" misc_feature 580..1995 /gene="Cdc7" /note="Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; Region: STKc_Cdc7; cd14019" /db_xref="CDD:270921" misc_feature order(604..618,628..630,688..690,694..696,724..726, 778..780,826..837,847..849,853..858,955..957,961..963, 967..972,976..978,1012..1014,1021..1023,1459..1461, 1465..1476,1480..1482,1597..1599) /gene="Cdc7" /note="active site" /db_xref="CDD:270921" misc_feature order(604..615,622..624,628..630,688..690,694..696, 778..780,826..837,841..843,967..972,976..978,1012..1014) /gene="Cdc7" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270921" misc_feature order(724..726,853..855,955..957,961..963,1021..1023, 1459..1461,1465..1476,1480..1482,1597..1599) /gene="Cdc7" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270921" misc_feature order(1009..1029,1102..1113,1444..1482) /gene="Cdc7" /note="activation loop (A-loop); other site" /db_xref="CDD:270921" misc_feature <1474..2004 /gene="Cdc7" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature <1906..2142 /gene="Cdc7" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" polyA_site 2678 /gene="Cdc7" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgctcccgc ggaacggaac gccgacgacc gaagacgagc acataatcta gacgatacga 61 tactaaccag tgcggtggcc agttaatgtg ctccatccgg ggaacccact tgcgaccagc 121 ggacgctgcg ccacagccag agttccggga ttaaagggcg gcgcagcagt agattctctg 181 gattctcgat tctctctggg atctctagac agcagaagaa gcatcgtcca agttctctag 241 atttccagac gcagatgccc aatggccgat cgcgttatgt gccaggaact ggcgacgccc 301 gggagtcacc actatcgtcg ccccaaatcg aatggtttgg cggcgagtcc ccatcaaatg 361 gtctatgcca atggcggggg atcctggcga gcggcgccca ggaatcagag gcttccagga 421 actggaaaca aatatatggg aaagtccagt gtagtggagg agcagcagca gcaggcggcg 481 gaatccgaaa tgctggccac accgcgaaca cccaagcagt cccgcaataa aagtgaagat 541 gccatcaatg atctcctggt gcgaataccc gacattggca agctgttcga tgttcacagc 601 cggattggca atggcacctt tagcaccgtc ttgctgggaa ctctgcgcag ggaatcgcat 661 ctgccggaca gtctgcgtcg caagttcgcc atcaagcatc atatacccac cagtcatccg 721 gataggataa tgaaggagct gcagtgcatg accaagatgg gtggcaccga gaacgtggtg 781 ggcatccact gttgcctgcg ctgcgacgcc tccgccgcct ttgtgatgcc ctacatggcg 841 cacgaccgtt tccacgactt ctacacgcgc atggatgtgc ccgagatccg tttgtatatg 901 cgcaatctgc tggtggccct ccggcatgtc cacaagttcg atgtgatcca tcgcgacgtg 961 aagcctagca atttcctcta caatcgccga cgtcgtgagt ttctgctggt tgattttggc 1021 ctggcccagc atgtgaatcc tcctccggca atgggatctt cttctgccgt cgtcaacagt 1081 cataataata gcaagcggcc gagggaacgg gatgccatgg aggcagtgca gcagcagatt 1141 gcaccagcgg atgctggcct gggcggagct gtgaagcgca tgcgtttgca ggaggacgtc 1201 agcaagatgc ctctaaagcc agtcaatgat attgccgaac agcatcagca gcaggatggc 1261 tctaatcccg tccagccagt gcaacagcca gtgcagcagg ggcaacagca gcaggtggat 1321 caagcaccct cctcatctgg cagcaagtac aatacaaatc gcaatgccgc gggatcgtcg 1381 aatgcaaaca atgccaagtg cttttgcttt gccaatccat ccgtttgcct caactgcctg 1441 atgaagaagg aggttcacgc gtcgcgtgct ggaactcctg gctatcggcc gcccgaagtg 1501 ctgctcaagt atccagatca aacgaccgcc gtggatgttt gggcagctgg agtgattttc 1561 ctatcaatca tgtcatctgt atatcccttc ttcaaagcac ccaatgattt catagcgctt 1621 gcggagattg taacgatatt cggggatcag gcgatcagga aaactgctct cgctttagag 1681 cgcatgatca cgctcagtca gcgatcgagg ccattgaatc tgaggaagct gtgcctgcgc 1741 tttcgccacc gttccgtctt cagcgatgcc aagctgctca agagccacga atccgtggac 1801 gggcgatgcg aggtgtgccg caactgcgat cagtactttt tcaactgcct gtgcgaggat 1861 agcgagtatc tgacggagcc gctggatgcc tacgagtgtt ttccggccag cgcctatgat 1921 ttgctgcatc gcctgctgga aataaatccg cacaagcgga tcaccgccga cgaggcgctg 1981 cagcatccgt tctttacggc cgccgaggag ggggaacaaa caacggggga tcaggaggcg 2041 gatggaacac ccaggaagat ccggcggcag agatatcaca atcacaagac ggtggccgcc 2101 acgccggagc aactgaagca gcaggtggcc ctcgatctgc agcaatcggc catcaacaag 2161 ctgtgaaact agtcctcaca ttatcacaca cattttgtat ataaaactat accccaagtc 2221 acatgtcacg attgtatata ccacgcacac ccatctgaaa tcccagaaga accagaagaa 2281 actcgtccag tgtacacaag tgtccaagtg gccacatcta cttacctcaa gctgcaggaa 2341 gaataaccaa aaaaaccaaa tggagcacat atatttatag gaaaaacgtt tcaatcatga 2401 acaataggaa aaggaatacc aaaaaagcta ggagagaatg atcatgaaga ttatggccgc 2461 caaggattgt atattgtatg ggctggaatc cgcgaaggca agccagcaaa ccaacaaaga 2521 aagtgcatgg atgcactaac catcatgttg tatagttcga atagtcttag cctagaccta 2581 agtttaatta ttgtatatcc gagagccgct cgagcggaga tatatgaagc gaaaatatat 2641 ttataccatg aagaatgaat gaaattgaaa atatcaaa