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LOCUS XM_017137379 2445 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_017137379 VERSION XM_017137379.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137379.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2445 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2445 /gene="oc" /note="ocelliless; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054420" CDS 688..2334 /gene="oc" /codon_start=1 /product="homeotic protein ocelliless isoform X1" /protein_id="XP_016992868.2" /db_xref="GeneID:108054420" /translation="MAAGFLKSGDLGPHPHSYGGPHPHHSVPHGPLPPGMPMPSLGPF GLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVAL KINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGSGSCSSSSANSRNNNNN SSNNNNSSSSHNNSQSSGGGNNKSSQKGSHNNNSQSSSSGNNSNNQNQNNNSAAAAAS AAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSGGGGSNNQGGGGGNSTPNSSSSGGS GGGGGGQAGHLSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIVCKKEHLSGGGGG GGGGGYSGVGVGGNNASSVGLNLGVVGGVGVSQDLLRSPYDQLKDAGGDIGAGVHHHH SIYGSAAGSNPRLLQPGGNITPMDSSSSITTPSPPITPMSPQSAAAAAHAAQSAQSAH HSAAHSAAYMSNHDSYNFWHNQYQQYPNNYAQAPSYYSQMEYFSNQNQVNYNMGHSGY TASNFGLSPSPSFTGTVSAQAFSQNSLDYMSPQDKYANMV" misc_feature 889..1056 /gene="oc" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" ORIGIN 1 tgccgctcgg gttgtttttg tgcgtcgtcc gtcgctcagt tgctcagttg ctcattcgcc 61 ccgttcgccg ctcgttcgat cgctctcgct actcgccgcg ttcgccgata agccataagc 121 cataggccaa taacaacaat caattcgccg tcgccaaagc aaagcaaaca aacaaaaatc 181 aaaacaaaaa gctatatagc tccatagcta tagctattga gaaacaacaa caacaagtcg 241 gagagaaata tactaagtaa taagggatat acaacacaga tatatccaag tgccagtgac 301 gagaatctgt ttttttaccg tgttgccagt gccaaacaat aaacatcgcc ccaaaaaaca 361 aacatctctc tggaatacaa aacatataat atatatatat atatgttata tatatatatg 421 cccaagctat agccatatag tagctggatc tgaaaacaag tcgccattgg aatacagcac 481 cgttttgcct ctagttttct ttgtgttttt ttttcgatcg cagatcagaa gcacaaccag 541 cgaattatct gagtggagta ccatatagcc agtatagtgg accgatccat cgatagacat 601 ccgatagaca cggatatcga ctatcggagc ctggggccag tggagacaca cagcttcaac 661 gtggcgctgc actcgaccga ggccttgatg gcggcgggct tcctcaagtc gggcgatctg 721 ggcccccatc cgcacagcta cgggggtccg cacccgcacc actcggtgcc ccacggaccc 781 ctgccgccgg gcatgcccat gccctcgctg gggcccttcg gcctcccaca cggactggag 841 gccgtcgggt tctcccaagg tatgtggggc gtcaacacac gaaaacagcg tcgcgaacgc 901 accacattca cacgcgccca attggacgtc ttggaggcgc tgttcggcaa gacccgttac 961 ccggacattt tcatgcgcga ggaggtggcc ctcaagatca atctgcccga atccagagta 1021 caggtgtggt tcaagaatcg tcgcgccaag tgccgccagc agttgcagca gcagcagcag 1081 tcgaacagcc tcagcagctc gaaaaatgcc agcggcagcg gcagttgcag cagttcctcg 1141 gccaacagtc gcaacaacaa caacaacagc agcaacaaca acaacagcag tagcagccac 1201 aacaactcac agagctccgg cggtggcaat aacaaatcaa gccaaaaggg cagccacaac 1261 aacaactcac agtcgagctc cagcggcaac aacagcaaca accagaacca gaacaacaat 1321 tcagcggcag cagcggccag tgcagcggca gcggtggcag cggcccaatc gatcaaaacg 1381 caccacagtt cctttttgag cgccgccgcg gcggcagcct cgggcggtac aaatcaatcg 1441 ggcggtggtg gcagtaataa tcaagggggc ggtggcggca attcgacgcc caacagcagc 1501 agcagcggcg gcagcggggg cggcggcggc ggtcaggcgg gccatctctc ggcggcggca 1561 gcggcggcgg ccctcaatgt gacggccgcc caccagaact cctcgcccct cttgcccacg 1621 ccggccacgt cggtgagtcc ggtgagcatt gtgtgcaaaa aggagcattt gtcgggcggc 1681 ggaggaggtg gtggaggagg aggctatagt ggcgttggag tgggcggtaa caatgcctcc 1741 tcggtgggcc tgaacctagg cgtcgttggc ggcgttggcg tctcccagga tctcctgcga 1801 tccccctacg atcaactcaa agacgccggt ggcgatattg gagccggggt gcatcatcat 1861 cacagcatct atggctcggc ggccggcagc aatccccgcc tgctgcagcc cggcggcaat 1921 atcacaccga tggacagcag cagcagcatc accaccccat cgccgcccat cacaccgatg 1981 tcgccgcaat cggcggccgc agcggcccat gccgcccaat cggcccagtc cgcccaccat 2041 tccgccgccc attcggctgc ctatatgtcc aatcacgatt cgtacaactt ctggcacaac 2101 cagtaccagc aatacccgaa taactacgcc caggcgccca gctactactc gcagatggag 2161 tactttagca atcagaatca ggtcaactac aatatgggcc actcgggcta tacggcctcc 2221 aatttcggac tatccccgtc gccctcgttc accggcaccg tttcggcgca ggccttctcg 2281 cagaacagcc tggactacat gtcgccgcag gataagtacg cgaatatggt gtagaaccta 2341 ctctttcaat actgcagcgg aggcaacagc aacaacaaca acagtagttc ggggggtgag 2401 ggttcgggat cgggatcagg atccggatcg gggagcaata gttcc