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LOCUS XM_017137368 2061 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017137368 VERSION XM_017137368.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137368.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2061 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2061 /gene="Hexo2" /note="Hexosaminidase 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054413" CDS 126..1988 /gene="Hexo2" /codon_start=1 /product="chitooligosaccharidolytic beta-N-acetylglucosaminidase" /protein_id="XP_016992857.2" /db_xref="GeneID:108054413" /translation="MRFSGHHRYFDRYQCFCSAVASLLLCFAVGAALTRADDPPPDGS RTLAKWLCSRTDICTSEAEKVEGLQYAPEVFESQRDCRLSCGKYGAIWPMPTGRECSI SHGRVRFDPWKVRFHVVAPGEAATQFLRETNRLFVSNLLKECTRNCTLESSKQILVRS TVANESLVLDWPTDESYALVVRTTDTATFVDIQATTVYGARHAFETLSNLVTGGQSNG LLMTSTANITDRPAFPHRGVLLDTARNFVPLKFIRSTLDAMAASKLNVLHWHVVDTHS FPLEITRVPEMQRYGAYSSAQTYSRQDALNLVKYARLRGIRILIEIDGPSHAGNGWQW GPSAGLGNMSVCLNQSPWRRFCVQPPCGQLNPLNDHMYAVLKEILEDVAEVGAPEETL HMGGDEVFLPCWNNTDEIRDGMRARGFDLSEQSFLRLWSQFHQRNLNAWDEINERMYP GIREPKSVIIWSSHLTNPRYIEAYLPKERFIIQTWVESQDALNRELLQRGYRLIVSTK NAWYLDHGFWGSTSYYNWRTVYSSAMPMGRSKDQVLGGEVCMWSEYVDQNSLESRIWP RAGAAAERLWSNPKSSALLAQRRFYRYRERLLARGIHADAVIPHWCVLHEGQCL" misc_feature 396..755 /gene="Hexo2" /note="Glycosyl hydrolase family 20, domain 2; Region: Glyco_hydro_20b; cl03741" /db_xref="CDD:446174" misc_feature 822..1928 /gene="Hexo2" /note="Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the...; Region: GH20_HexA_HexB-like; cd06562" /db_xref="CDD:119332" misc_feature order(855..857,942..944,1104..1106,1314..1319,1506..1508, 1578..1580,1659..1661,1665..1667,1776..1778,1782..1784) /gene="Hexo2" /note="active site" /db_xref="CDD:119332" polyA_site 2061 /gene="Hexo2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gttttgttgc gcccggcgag cggagcgggt gggcggtgag caggcggcga aaaataccaa 61 ataccaaaaa tacaaaaaat tataaaagcg gccggcgcag ccgaggaagc cgttagaaag 121 gaacgatgcg gttcagcggc caccaccgtt atttcgaccg ttatcagtgc ttctgctcgg 181 cggttgcttc gctgctgctc tgcttcgcgg tgggcgcggc gctgacgcgg gcggatgacc 241 cgcccccgga tggatcaagg acattggcga agtggctgtg cagccggacg gacatctgca 301 cctcggaggc ggagaaggtc gagggcctcc agtacgcgcc ggaggtcttt gagagccagc 361 gggactgccg gctgtcgtgc gggaagtacg gggccatctg gccgatgccc acgggcaggg 421 agtgcagcat ctcgcacggc cgggtgcgct tcgatccgtg gaaggtgcgc ttccatgtgg 481 tggcgcccgg cgaggcggcc acccagtttc tgcgcgagac gaaccggctg ttcgtctcga 541 atctcctgaa ggaatgcacg cgcaactgca cgctggagag cagcaagcag atcctggtca 601 ggtcgacggt ggccaacgag agtctcgtgc tcgactggcc caccgatgag agctacgctt 661 tggtggtgcg gaccacggac acggccacct ttgtggacat tcaggcgacg acggtctacg 721 gagcccggca tgccttcgaa acgctgagca acctggtcac cggcggccag tccaatggcc 781 tgctgatgac ctccacggcc aacatcacag atcgtcctgc cttcccgcat cgcggggtgc 841 tcctcgacac ggccaggaac tttgtgcccc tgaagttcat ccggagcacg ctggatgcca 901 tggccgccag caagctgaat gtgctgcact ggcatgtggt ggacacgcac agcttcccgc 961 tggagatcac ccgcgtgccg gagatgcagc gctacggggc ttattcctcc gcgcagacct 1021 actcccgcca ggatgccttg aatctggtca agtacgcccg gctccggggc atccgcatcc 1081 tgatcgagat cgatgggccc tcgcatgcgg gcaacggctg gcagtgggga ccctcggcgg 1141 gattgggcaa catgtccgtg tgcctgaatc agtcgccctg gcggagattc tgcgtgcagc 1201 cgccgtgcgg ccaactgaat cccctgaacg atcacatgta cgccgtgctg aaggagattc 1261 tcgaggacgt ggccgaggtg ggggcgccgg aggagaccct ccacatgggc ggcgacgagg 1321 tcttcctgcc ctgctggaac aacaccgatg agatcaggga tggaatgcgt gcccggggct 1381 tcgatctcag cgagcagagc ttcctgcgcc tgtggtcgca gtttcatcaa aggaatctca 1441 atgcctggga cgagatcaac gagcgcatgt atccgggcat cagggagccc aagtcggtga 1501 tcatctggtc cagtcacctg accaatccgc gctacatcga ggcctatctg cccaaggagc 1561 gcttcatcat tcagacctgg gtggagtcgc aggatgccct gaatcgggag ctcctgcagc 1621 ggggctaccg gctgattgtg tcgaccaaga atgcctggta tttggatcac ggattctggg 1681 gcagcacctc ctactacaac tggcggacgg tctactcgag cgcaatgccc atgggtcgca 1741 gcaaggatca ggtgctgggc ggcgaggtgt gcatgtggag cgagtatgtg gaccagaact 1801 cactggaatc ccgcatctgg ccgagagccg gagctgccgc cgagcgtctg tggtccaatc 1861 ccaagtcgtc tgctttgctc gcccagcgga ggttctatcg ctaccgggag cgactcctgg 1921 cccgcggcat ccatgcggac gcggtcatcc cgcactggtg cgtcctccac gagggccagt 1981 gcctttgaag atacctcctt tcagcctatg ttaccctctc ccctcatcag ttattgccca 2041 taaagatctg tttttaatcc a