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LOCUS XM_017137359 2794 bp mRNA linear INV 09-DEC-2024 helicase CG14443 (LOC108054407), mRNA. ACCESSION XM_017137359 VERSION XM_017137359.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137359.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2794 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2794 /gene="LOC108054407" /note="putative ATP-dependent RNA helicase CG14443; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054407" CDS 224..2737 /gene="LOC108054407" /codon_start=1 /product="putative ATP-dependent RNA helicase CG14443" /protein_id="XP_016992848.2" /db_xref="GeneID:108054407" /translation="MCEKGENAEMIKMKDDVSEEKIQVQGAEEKVKPTEDEKPNSPIR KRSKSPKSSSTESSSSSSAKSSSDSDSDSNSDSTLEKRRKNRSVTKSRSSQGSSNPGT NRSTARSRSPHRIYKNYSDSDSPLEKRAKNRSVTKSRSSKGSSIPGKNRSVNKSRSSQ GSSNPGKNSKSSSTRSRSFYRIGNIYSDSDSDSSVEKRKKYRSVIKSRISQGSSNPGK NSQSHHRIDNIYSDSDSDSSVENRRKSRSGIKSSSFQRNSNPGKNSQSLHRIDNIYSD SDSDSSVEKRRKSRLVTRSRSFQRSANPGKNRSVTKSRSFHRSSNPGKKFQSFSDSDS SVEKRRNYRSVTRSRSFQRSFNSGRNRSRSFQRTSNPWKKNRSPTRSRSPRTSRSRLD DNDDDYYYETEFYRRRHQISVASCDHRSAPKPIQSFRRSGFGQSITRRLELRGYASPT PIQAQSWPVALAGTNLMMVSGSGTGKTLGCLLPGIRKIQAEHHHHHQSTSSRRRNDGP IVLVLVDCREAALLVQKEAVAYTNPRELRSQCIMGSGRRSIANNSSPDLLVATAGRFL ELMPTISLDRCTYLVIDDIDRLLDVGFKGQLCRLLSLMHRQAQLVISATSWTRDLQRL ARKYMGNYTLVRVGGEIDASEGLLKIRQRVMVTSGRSKMEQLKKQLAEIYDSSDNPGK VVIYSERQRQVDELVAFVRLYVPCAGLHGGRSASERDDIIRAFRHGSYNIIVATDMTQ RGLDVPGIRYVINYDFPYNMEGYVQRLTRTGICQSESRNCEAISFITQENLKVSRALV DFLEEYNQPVDPQLRQMAKNTRDSRSQRRKNHWARRNHF" misc_feature 1424..2731 /gene="LOC108054407" /note="N-terminal helicase domain of the DEAD-box helicase superfamily; Region: DEAD-like_helicase_N; cl28899" /db_xref="CDD:475120" misc_feature order(1556..1561,1565..1573,1580..1582,1634..1657) /gene="LOC108054407" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350669" ORIGIN 1 aagcccaata aaatatttta caatacatat tttatgcgat taattttcca aaactatttt 61 tttcaacact acaaaaccct gaaaatcttg accaacacca aagtttagag ttgtctcctc 121 tcctttagtc ctttttcact acgattgaca tttcgctgtc ttgacaagtg aaaaaaaagc 181 gaaacttggc aaaaagttag ggcgaggaaa aactagagca aaaatgtgcg agaaaggtga 241 aaacgcggag atgattaaga tgaaagacga tgtttcggag gagaaaatcc aagtccaagg 301 agctgaggaa aaagttaagc cgacagaaga tgaaaagccg aatagtccga tacgtaagcg 361 ttccaaatcc ccaaagtcat ccagtacgga atcgagctca agctcctcgg ccaaatcttc 421 gtcggattca gattccgatt ccaattcgga ttctactcta gaaaagagaa ggaagaatcg 481 ttcagtgacc aaaagtcgca gttcccaagg gagttccaat cctgggacga atcgttctac 541 tgccagaagc cgtagtcccc atcgtatata taaaaactac tcggattcgg attctcctct 601 agaaaagaga gcgaagaatc gttcagtgac caaaagtcgc agttctaaag ggagttccat 661 tcctgggaag aatcgttcag tcaacaaaag tcgcagttcc caagggagtt ccaatcctgg 721 aaagaattcc aagagttctt ccaccagaag ccgtagtttc tatcgtatag gtaatatcta 781 ctcggactcc gattcggatt cttctgtaga aaagagaaag aaataccgtt cagtgatcaa 841 aagtcgcatt tcccaaggga gttccaatcc tggaaagaat tcccagagtc accatcgtat 901 agataatatc tactcggact ccgattcgga ttcttctgta gaaaatagaa ggaaatctcg 961 ttcagggatc aaaagtagca gtttccaacg gaattctaat cctggaaaga attcccagag 1021 tctccatcgt atagataata tctactccga ctccgattcg gattcttctg tagaaaagag 1081 aaggaaatct cgtttagtga ccagaagtcg cagtttccaa cggagtgcca atcctggaaa 1141 gaaccgctcc gtgaccaaaa gtcgcagttt ccatcggagt tccaatcctg gaaagaaatt 1201 ccagagtttt tccgattcgg attcttctgt agagaagaga aggaactatc gttcagtgac 1261 cagaagccgc agtttccaac ggagtttcaa ttctggaagg aacagaagtc gcagtttcca 1321 acggacttcc aatccctgga agaagaatcg ttctcccacc agaagccgta gtccccgtac 1381 ttcccgtagt cgcttagatg acaatgatga cgactactat tacgaaacgg agttctaccg 1441 gcgacgtcat caaatttccg tggccagctg tgaccaccgt tccgctccca agccgatcca 1501 aagctttcgt cgcagtggct tcggccagag catcacccgt cgcctggagc tccgtggcta 1561 cgcgtcgccc acacccattc aggcccaatc ctggcccgtt gccctggctg gcaccaatct 1621 gatgatggtt tccggctctg ggacgggcaa aacgctgggc tgcctgctgc cgggcatccg 1681 gaagatccaa gcggagcatc atcatcatca ccaatccacc agcagtcgtc gccggaacga 1741 tggacccatt gtcctggttc tggtggactg tcgcgaggca gccctgttgg tgcaaaagga 1801 ggcggtggcc tatacgaatc cccgggagct gaggagccag tgcatcatgg gcagtggccg 1861 tcgcagcatt gccaacaatt cttcgcccga tcttctggtg gccacggccg gtcgtttcct 1921 ggaactgatg cctacaattt cgctggatcg ttgcacctac ttggtgattg atgacattga 1981 tcgtttgctg gatgtgggat tcaagggtca attgtgtcga ctcctcagcc tgatgcatcg 2041 ccaggcccag ttggtcatct cggcgacgtc gtggacgcgt gaccttcagc gtttggcccg 2101 caaatatatg ggtaattaca cattggttcg tgtgggcggt gagatcgatg ccagcgaggg 2161 attactcaag atcaggcagc gagtgatggt gaccagtggt cgctccaaga tggagcagct 2221 aaaaaagcag ctggcggaga tctacgattc gagcgataat cccggcaagg tggtcatcta 2281 ttcggagcgc cagcgacaag tggatgagct ggtggccttt gtgcggctct atgttccctg 2341 cgccggcctc catggcggac gcagtgcctc cgaaagggat gatataatcc gtgcctttcg 2401 ccacggctcc tacaacatca tcgtggccac cgatatgacc cagcggggat tggatgtgcc 2461 cggcattagg tatgtgatca actacgattt tccctacaac atggagggct acgtccaacg 2521 tttaacccgc actgggattt gccagtcgga atcccgcaac tgtgaggcca tcagtttcat 2581 cacgcaggag aatttaaagg tttcccgggc tctggtggat ttcctcgagg agtacaatca 2641 accggtggat ccgcaactca gacaaatggc caagaatacc agggatagtc gctcccagag 2701 acgcaagaat cattgggctc gtcgcaatca tttttaatgg atttaaatgg aaccccaata 2761 aatactgggc taaccccaat gaattttaat cgat