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LOCUS XM_017137357 6218 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_017137357 VERSION XM_017137357.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137357.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6218 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6218 /gene="pigs" /note="pickled eggs; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054405" CDS 741..3710 /gene="pigs" /codon_start=1 /product="GAS2-like protein pickled eggs" /protein_id="XP_016992846.2" /db_xref="GeneID:108054405" /translation="MAMLEARPYRPFKSSEEYLEAMKEDLAEWLSTLYPELSINAENF MDRLDTGVALCKHANYVRQAAEDYLARRQARNKSMTRSMTSGLAGPILALGNVHYLPA AKSGTFFARDNVSNFITWCRKSLKIIECLLFETDDLIMRKNEKHVILCLLEVARRGAK FGMLAPMLVQMERQIDREIAADIKANGQGVGSSESGTQTEGMGAGNSTACTTTTITTT TVETDLYDDSDDSETEDDGDENPVLMYGPQPQIITNDLKSLDEMVRDLVEKCTCPSQF PMVRVSEGKYRIGDTKVLIFVRILRSHVMVRVGGGWDTLSHYLDKHDPCRCRAQHRSS VAARLVPRQSPNHNPSNGIELHKAQVIFERSPPAARRVFINPNCNGGSGTVASGTGSS SAGVGVAPPPQSLQNGHSLSPNSGKYRSRSPTPQRKFLNQQTNGVAGGGGGSASASQT AVTSQTVISESSSAGQLLGSPSLARRSMSPSPRRLIDMRKKQSSLDSYSSGPKSLPGY SCSSMEEAANGGGSAGGAGQGSGAAAAAATAEQGGANKFENISDNGSEISDEGYRSLG VIQSGAQKRESLHSQASIEDAESNARLDQTSSDSQISPSDEPATDEKTAVDILEEEDL NGHDRGAEEEEEHEDYSVCDGPQSLPAILSVAHKLNDKFERSGVFITDDEITVDMAKT EDPVASALAVPTPNLSKIPRSPLAQRRRRSIDNSTCGGGAGGSLQDLSSNRSGLPAPA FSRKQPVYRSVRTRNSTGATPPPPPPAAPRSRQATQLPMVRDVTNTWSGRPKRRPPCN ADTFVAPPNANGGAASFERNGKGRSSQILYDSNGRRVRSGAPGCTSSLTTSPVKNHAS SPLAQQLLEAASSAKNDAQILEKMKSLLSRYAAGNQAKGGSGKISSTNGKKTPVYEDF TTAWVHSNGNLERSESCSPPAKARSKRSSAASSCESQNSKDQGAGTGGSSSVVSPRRE RGMSKIPAPVRHHTELY" misc_feature 771..1229 /gene="pigs" /note="calponin homology (CH) domain found in GAS2-like protein 1 (GAS2L1), GAS2L2, and similar proteins; Region: CH_GAS2L1_2; cd21268" /db_xref="CDD:409117" misc_feature order(804..806,816..818,1065..1067,1071..1076,1083..1088, 1092..1094,1125..1151,1167..1169,1173..1178,1182..1187, 1194..1199,1206..1208) /gene="pigs" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409117" misc_feature 1515..1721 /gene="pigs" /note="Growth-Arrest-Specific Protein 2 Domain; Region: GAS2; pfam02187" /db_xref="CDD:460480" polyA_site 6218 /gene="pigs" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acaccgcgcg ccgatggttg tcttttggtt tccgttagat cttttcaaaa acgtatctcg 61 aaaaacatgc gttaaatttg ccgggaagcg ggatatatca tatttgacta aatatatatt 121 attactatga ttgttttaca tattcccagc gagccaattg tttttgggcc gtgacgcggg 181 attctttttg tttatgttct tttgaaaccc tgtgtgcgaa aagataaaac cctttttcga 241 aaaaaaataa aaccgcgaag tggagtgaaa aatttgcatc actttgtgca tattaaaaca 301 atataaccgc aaaaatattg atactattta atatgatttg atatttgatt tttcccacaa 361 ttgttttgtt cttgtgaaag cgaatcaaac aaaatttgca tacaaatcga gggattggcg 421 gatatctttt aaaaggttcc ggccccagct gaggaaaacc aacagaaaag aacaagaaac 481 cgaactgtag aaggcgcaca gtggggagat atcaacacca gatcgcttaa tatcgaaccg 541 aaccgaaccg aaccgaaaag ctaatccgaa ccagacgcga tgcactgcaa ccaaaagcgt 601 aacgaaaaca cgacgaccaa tctttgctaa aaaagtatat aaaataacaa taatatataa 661 aaaaccccaa atattgaaat cgaaagctaa ggcaaagaaa gagtttttgg aggagaaaat 721 cacaaagtta taacgacgcc atggccatgt tagaagcaag gccctatagg ccattcaaat 781 ccagcgagga gtatctggag gccatgaagg aggatctggc cgaatggctt agcaccctct 841 atccggaact gagcatcaac gcggagaact tcatggatcg cttggacaca ggcgtggcat 901 tgtgcaagca cgcgaattat gtgcggcagg cggccgagga ttatctggcg cggcgacagg 961 cccgcaacaa atcgatgacc cgctcgatga cctccggcct ggcgggtcca attcttgccc 1021 tgggcaacgt ccactacctt ccggccgcca aaagtggcac cttcttcgcc cgcgacaacg 1081 tgtccaactt tatcacctgg tgcagaaaaa gtcttaagat catcgagtgc ctgctgttcg 1141 aaacggacga tctgattatg cgaaaaaacg aaaagcatgt tatcctgtgt cttttggagg 1201 tggcacgtcg gggtgccaaa ttcggtatgc tggctcccat gctggtgcaa atggagcgac 1261 aaattgatcg ggagatcgcc gccgacatca aggccaatgg ccagggagtt ggctcctcgg 1321 aaagcggcac ccaaacggag gggatgggcg ccggaaatag tacggcctgc acaacgacga 1381 caataacgac aacgacggtg gagacggatc tgtatgatga cagcgatgat tcggagaccg 1441 aggatgatgg cgatgagaat cccgtactga tgtacggccc acagccccag ataatcacca 1501 atgatctgaa gagtctcgat gagatggtca gggatctggt ggagaagtgc acttgtccct 1561 cacagttccc catggtcaga gtgtccgagg gcaaatatcg tatcggcgac accaaagttc 1621 ttatctttgt gcggatcctt cgttctcacg tgatggtgcg cgtcggtggc ggctgggata 1681 cactatccca ttatctggac aagcacgatc catgccgctg ccgtgcccaa catcgcagct 1741 ccgtggccgc ccgtctagtt cctcgccagt cgccgaatca caatcccagc aatggcatcg 1801 agctccacaa ggcacaggtg atattcgaga ggtcaccgcc agcagctcgt cgggttttta 1861 tcaatcccaa ttgcaatgga ggatcgggaa cggtagcgag tggaacagga tcctcatccg 1921 caggagtggg cgtggccccc ccgccccaat cgctccaaaa cggacacagt ctatcgccga 1981 attcgggcaa gtaccgcagt cgcagtccga cgccccagcg aaagtttctc aaccagcaga 2041 cgaatggagt ggccggtgga ggaggaggca gtgcatccgc atcccaaaca gcggtaacca 2101 gccagacagt cataagcgaa tcctccagcg ccggtcagct actgggatca cccagtttgg 2161 cccgacgctc tatgtcgccg agtccacgcc gtttgatcga tatgcgcaag aagcagagct 2221 ccctggattc gtacagcagt ggtcccaaat cgctgcccgg ctacagttgc tcctccatgg 2281 aggaggcggc gaatggtggt ggatctgccg gaggagctgg ccagggatca ggagcagcag 2341 cagcagcagc aactgcggag cagggtggcg ccaacaaatt tgagaacatc agcgacaatg 2401 gcagcgagat cagcgatgag ggctaccgca gcctgggcgt catccaatcc ggagcccaga 2461 aacgcgagtc cctccacagt caggcttcaa tcgaggacgc tgaaagcaat gcgcgtctgg 2521 atcagacctc cagtgactcg cagatctcgc cctccgatga gccggcgacc gatgagaaga 2581 cagccgtgga tattctcgag gaagaggatc tgaatggcca tgatcgagga gcagaggagg 2641 aggaggagca cgaggactac tctgtgtgcg atggtcccca atccctgccg gcgattttaa 2701 gcgtggccca caagttaaac gacaaattcg agcgatccgg tgtgttcatc accgacgacg 2761 agatcaccgt ggacatggcc aagaccgagg atcctgttgc ttctgccctc gcagttccaa 2821 cgcccaatct cagcaagatt ccgcgctctc cgctggcgca acgtcgtcgc cggagcatcg 2881 acaatagtac atgtggcggt ggtgccggcg gaagtcttca ggatttgagc agtaatcgct 2941 ccggattgcc ggcaccggct tttagccgaa aacagcccgt ttatcgttcg gtgcgaacgc 3001 gcaactccac gggagcaacg cctcctcctc cgcctcctgc agctccgcga tcccgtcaag 3061 ccacccaatt gcccatggtg cgggatgtga ccaatacgtg gagcgggcga ccaaagagga 3121 ggccgccctg caacgccgat acctttgtgg cgccaccaaa tgcaaatgga ggagcagcat 3181 cctttgagcg gaatggcaag ggacgctcct cgcaaatcct gtacgacagc aatggacggc 3241 gagtgcgaag tggagcaccc ggatgcacta gttcgctgac cacatctccc gtgaagaatc 3301 atgcctcctc gccgctggca caacagcttt tggaggcggc cagcagcgcc aagaacgatg 3361 cccagattct ggagaagatg aagtccctgc tgtcacgcta tgcggctggt aaccaagcga 3421 agggaggatc aggaaagatc agtagcacta atggcaagaa gactcccgtc tacgaggact 3481 tcaccaccgc ctgggtgcac agcaatggga atttggagcg ttcggagagc tgttctcctc 3541 cagccaaggc cagatccaag cggagttccg ctgccagttc gtgtgagagt cagaactcaa 3601 aggatcaggg agcaggaaca ggaggatcat ctagtgtggt ctcaccgagg cgggagaggg 3661 gcatgtccaa gattccagcg ccagtgcgac atcatacaga gctttactag cagcgccgga 3721 ggacgccaag cgtccaggtg gaggtccgtt tccaagccaa gtcgagggtt ttctgaaaag 3781 cctccaaagg gagcagagat cgcggggtag tacgtatgtg taggcaatag gataggatta 3841 gagccaagct ggaattgtct gctgctgcta cggcgtgtgt gtgtgcgtgg ggagcagaag 3901 agagaagaat cctggagaag aatgggcact cagaagaaaa gcaaattcag atgagaagaa 3961 tccctgagaa gaaactgaag aatgggcact cagaagatca gcaaattcag ttgagaagaa 4021 tccatgcgaa gaaagagaag aatgtgaaga atccataaga agaaagtgaa gaattggagg 4081 gtcaaaaggg ggaactcaga agatcaccca ttcggaagat ttaaacccga aagatagtcc 4141 aataaagaaa atctcctgat agagaatcag aaggagaatc attaagaaac aaagaaaaac 4201 caaaagacaa agaaatccga aagtaaagcc atagctgtag gacacccaaa tcagaatcag 4261 aatcaggatc gagaaatgtc gagtgaagaa agtgaaaaac tgaaactgcc tcatagacag 4321 acgacaggtc agaatcagag aatcagaatc cctagcagcc agagacccct aagcatatct 4381 ataccctata aacaaacagc tctctcttaa gctcaactta taatgaaccc cctgtaatcg 4441 acgttatatc tactctctct tttcgtataa ccacttaata gatttccctt aactttatat 4501 ttccaaatat catttttgtg actctacaac agcattttcg taaaaacaaa agcaagcatt 4561 ttatttgtat ttaaagctat atatcgcttc gatctgtgct gatctagggt aatgaatata 4621 taccatatat acaatccaaa tttgagactc gagtaaaaat tttaaatcaa ttttttgtct 4681 agacctagaa caggaatttt aaatttacac gaaagccgca aaatcagaac aatatcgaat 4741 atatatatat atatatatat ctatttaaaa gcataaagac acactcacaa acacacacga 4801 tcgcaaaaac atatagaggg cgcgcgcata catagttttc tagaaatttt taaagtaaag 4861 ccaagcaaat tcttcagatt cgatttgtag cgaagcagaa tacatttatt tttgtacgct 4921 tgagatcaga ggatcggagg atcgaaggaa ccggggatct ggaaagatga ctagctttta 4981 gacaactcga cttttacagt atagctatat atatatacat atacaaggaa gaggaagagt 5041 ggattcggtt agggatatag caatcatagc taggaaataa agcgaaaggc cccggaaaaa 5101 gtgggtgctc cttggtctgg gaactccaaa atcacgctct tcaagaaacc cacaaaactt 5161 gcaccaccaa aaaaaaaaaa atcaaaacac acacacacac actacaagag ggatacagtg 5221 cgtttcggaa gtttagttcg aaattaataa atgcgtactg tatgaaagat ataaaacata 5281 taaaacttga aaacacaaaa caagaaaaac ggtcacaaaa aaaggaaaat aactgagaaa 5341 ctatagcttt tgttaggaca gaacgaacga atgaaccata gcataattat cagaacagaa 5401 cccttctaca atttctacta tctattataa aaaacataca tatattgtac gattattatc 5461 tttttttttc tttagcccta gcaatgttaa catatagttt agtacaacgt acctatgatc 5521 ataactatat agattgtaaa ttgtgtttgt ccaattgccc cccatgttgt gtatagttat 5581 tatatactat gtaaaatcgg ccttaatgtt cagtctgtcg atagtatcga taccttatat 5641 cattttcatt ttgtacctac ttttttttgt tctttttcgt ataatttcta ttcgaattaa 5701 gttgcgtttt tcagcttttt attgtacacc aaatgattac caatttatgt atagaaacga 5761 acaaaataat taatgattaa ttgtttaaca attaaattgt tccaatacac acacacacac 5821 acatagacaa aaacacacct gaaccgtggt gtgattacaa ttatagagaa ttaagcaatt 5881 tgcattcgca agccaaaaaa taaaaaaaag aaaaaggttg ataaaaaatc gagcgaacag 5941 aggaagaaag atcgcatcgc atcgcagcat cacatcgcat cgcaaatata atataatatg 6001 tacatgtatt tggttatata tcgcagaaca tataaagtgt attttaaata cagctaaagt 6061 gtaattatca attcatttcg atttcgaaag caaactaact attacaaatg gaatagatta 6121 gacaaacaag cagcataatt gattttaatc acaagaattt aataaaaata atgaaagcct 6181 atatacaaaa ataataaaat atatgatgaa aaccaaaa