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LOCUS XM_017137355 1164 bp mRNA linear INV 09-DEC-2024 (LOC108054404), transcript variant X1, mRNA. ACCESSION XM_017137355 VERSION XM_017137355.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137355.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1164 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1164 /gene="LOC108054404" /note="uncharacterized LOC108054404; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054404" CDS 198..1001 /gene="LOC108054404" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_016992844.1" /db_xref="GeneID:108054404" /translation="MSHHQQVLSESTALRLINGMVATGSATPPAVQPPSTGPADVSCL PEIGATNRGTPTASMAALEISSARQRMLPPITRRPSQESVHSANENGNSCRICRWNRS DMEIIKCPCNCKGSVGFIHLKCLKRWIMHRRDNRCEICNAVFDISEERVSLKQMMRTF CCGRCCGLIVKHLLFSASLMPLAHIILQQVLQCMDNLNQGSTEQLTVQEVFVASCALL TSSALFFHFFEFVTTRCLLIRNILRHWWMFGSTSDFALVEIEDDSIDLF" misc_feature 477..620 /gene="LOC108054404" /note="The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins; Region: RINGv; smart00744" /db_xref="CDD:128983" polyA_site 1164 /gene="LOC108054404" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 catcaacgag cctacataac tcggtggaag tctaacgttc aagttgtatg taagatgtcg 61 caggaaaatt cggtgtagaa atttgtaact caaaatttgg ttcgtaacgc acacaagaac 121 acacgccaat accaccgcca agcagttcga aagatcagtg catcaacatc tgtgtaccgt 181 gtacctccgg gcaaaatatg tcgcatcatc agcaggtcct ctcggaatcg acggcccttc 241 gcctgatcaa tgggatggtg gccaccggca gtgccacgcc cccggccgtt cagccgcctt 301 cgacgggacc ggcggacgtt agttgtttgc cggaaatcgg ggccaccaac cggggcactc 361 ccactgcctc aatggccgcc ctggaaatat cgtcggctcg tcagaggatg ttgccaccca 421 taactaggcg tccctcgcag gagagcgtcc actcggcgaa cgagaatggc aactcgtgcc 481 gcatttgccg ctggaatcgc agcgatatgg agatcatcaa gtgtccctgc aattgcaagg 541 gcagcgtggg attcatccac ctgaagtgcc tgaagcgctg gattatgcac aggcgggata 601 atcgctgcga gatctgcaat gcggtcttcg acatctcgga ggagcgggtc agcctgaagc 661 agatgatgcg aaccttttgc tgcggtcgct gttgcggcct gatcgtaaag cacctgctgt 721 ttagcgcctc actgatgcca ctggcccaca tcattttgca gcaggttctg cagtgcatgg 781 ataatctcaa ccagggcagc accgagcagc tcaccgtcca ggaggtgttc gtcgcctcct 841 gcgccctttt gacctccagc gcccttttct ttcacttctt cgagttcgtc accacgcgct 901 gcctgctcat ccggaacatc ctgcgccact ggtggatgtt cggcagcacc tccgactttg 961 ccctggtgga gatcgaggac gactccatcg atctcttttg atcaggataa taaaaagatg 1021 ttaaaaaggc tgcgagcgaa aggggtgaac ggtgcaattt tccaccgacc aacagacatc 1081 ttcgatgatt tcactaagat ctgatctagt tagaacaaat tttaattttc aataaaacca 1141 gtttcactat ttttcccata agaa