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LOCUS XM_017137336 1370 bp mRNA linear INV 09-DEC-2024 (LOC108054400), mRNA. ACCESSION XM_017137336 VERSION XM_017137336.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137336.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1370 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1370 /gene="LOC108054400" /note="homeobox protein OTX2-A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054400" CDS 10..789 /gene="LOC108054400" /codon_start=1 /product="homeobox protein OTX2-A" /protein_id="XP_016992825.2" /db_xref="GeneID:108054400" /translation="MAGPFISPLPGDLLTEYMFGRRRQRRNRTTFTPQQLQELEALFQ KTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQLLQDAWRMRCLSLGTP PVMGGGSVQGGSASGAPPRPNSQTPENLSSSSGKDSDLGEVSNGPSSGSFTMMHPAFQ QQQQQQQQQQHGHQLAQDQEKLSKTYTELKLYKAPTHGMELGGMDALSGHSDEGSDGS DSEEIDLTSGACIDFSQSSKLQQQQQSNQGAAGSAEANGVL" misc_feature 94..252 /gene="LOC108054400" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" ORIGIN 1 acgcctataa tggctggtcc gtttatatcg ccgctgcccg gcgatctgct cacggagtat 61 atgttcggcc ggaggaggca gcgccggaat cggacgacct tcacccccca gcagctgcag 121 gagctggagg ccctgttcca gaagacccac tatcccgacg tcttcctgcg cgaggaggtc 181 gctttgagga tcagcctcag cgaggcacgc gtccaggtgt ggttccagaa tcggcgggcc 241 aagtggcgca agcaggcgcg cctgcagctg ctgcaggacg cctggcggat gcggtgcctc 301 agcctgggca cgccccccgt catgggcggc gggtcggtgc aggggggatc tgcctccgga 361 gctcctcctc gtcccaacag ccagacgccc gagaacctat cctcctcctc cggcaaggac 421 tccgacttgg gggaggtgag caatggaccc agttccggta gcttcaccat gatgcatccg 481 gcattccagc agcagcagca gcagcaacag cagcagcagc acggccacca gctggcccag 541 gatcaggaga agctatcgaa gacctacacg gaactgaagc tctacaaggc gcccacgcac 601 ggcatggagc tgggcggaat ggacgccctc tccggccact cggacgaggg atccgatggc 661 tccgattccg aggagatcga tctcacttcc ggcgcctgca ttgacttctc gcagagcagc 721 aagctccagc agcagcagca gagcaatcag ggggccgcag gatcagcgga agcgaatggt 781 gtcctttaga caaggatatt tatagggatt ggaacgaata aggatacagc tactcacact 841 cgtacagtgc tcactcgcct tagtgtattt ctattcgaaa ttcccttttc aaagcgtaga 901 actttatcta aaacatgtag aacatgtaat cgaaaattta ataacttttt ttttattttt 961 aaaatatcaa aaaaaaattt tagaaagtcg ccaatggatt tgcttttctg gcaattattt 1021 tctatatttc tggaacattt cttaaatttt gattaatttg aagaaaattt tctttaccag 1081 tagaaaattg tttttatttt aaagaaaaaa atcgacagtt aagcaaatcc ataggcgatt 1141 ttctaaaatt cagggcgatt aatttttttt tgagtgaatg taatgaattt ttcttttttt 1201 ttatattttc tgtactttga aacctgcata ccatttttac tatatttcga aaactgcact 1261 cccaaaattt cgaatatcaa aattcctatt ttgagcgatc actgtacaca taaaaatggc 1321 gatgtatata acggacattt aatgtgcatt ttatttaacc atttacatct