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LOCUS XM_017137160 1886 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017137160 VERSION XM_017137160.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137160.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1886 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1886 /gene="dob" /note="doppelganger von brummer; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054280" CDS 162..1562 /gene="dob" /codon_start=1 /product="patatin-like phospholipase domain-containing protein 4" /protein_id="XP_016992649.2" /db_xref="GeneID:108054280" /translation="MKIRTRRSLSFAGCGFLGIYHVGVAVCLRQHAPQLLLERIAGAS AGALAACCLICDLPLECMAEDFLRVVQETRRHSLGAFSPWFNLPECLLEGMHRRLPAD AHRRVSGRLHISLTRVSDRCNVVMSEFDSRQELLQALMCSCFIPGLSGLLPPQVKGVR YMDGAFSNNLPLLDEHTVTVSPFCGESDICPRDQSPHLLQLNINWANTCIRLSRRNLR RMVRILLPGRADFMANFCQQGYDDALHFLRRNSLLKEGFRVKEKIMISWIHQQEERER ARGESPRVLEKAVKEKKSQEQMDRKQNRRNRKQKPQRQYLQSPLKNQQEKKNVRSQEE RIRKENYPKKATTTRENHLEKSLNLTPQEEQHCSLIGSTWSLLRRVMTAPPLARHMVQ MIARRLSRSLTLCEQPHFDLALMQAPSTSSSSSHCPPSTPLGDSDNGDSKVKAKRVCE ASQVEAGDQMAEDEGH" misc_feature 180..920 /gene="dob" /note="Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2; Region: Pat_iPLA2; cd07218" /db_xref="CDD:132857" misc_feature order(201..206,210..212,291..293,648..650) /gene="dob" /note="active site" /db_xref="CDD:132857" misc_feature 285..299 /gene="dob" /note="nucleophile elbow; other site" /db_xref="CDD:132857" misc_feature 870..>1208 /gene="dob" /note="Chromatin assembly factor 1 complex p150 subunit, N-terminal; Region: CAF-1_p150; pfam11600" /db_xref="CDD:402959" ORIGIN 1 cacactttcc cggccgagaa ttaagctcga aagaaaactt ggaaaaataa aggaaaacgt 61 caacaataaa tcggaaaaga gacggctata cgggattggg cgatcacgtg gagaggtctg 121 atgccacgaa gagctagcac ttgaatatat gaagatccga gatgaagatc cgaacgagga 181 ggagcctttc cttcgccggc tgcggcttcc tgggcatcta ccacgtcgga gtggccgtct 241 gcctgcgcca acatgcgccc caactgctgc tggagaggat tgccggcgcc tccgccggag 301 ctttggccgc ctgctgcctg atctgcgacc tgccgctgga gtgcatggcc gaggacttcc 361 tgcgggtcgt ccaggagacg cggcgccact cgctgggcgc cttcagtccg tggttcaacc 421 tgccggagtg cctcctcgag gggatgcacc gccgcctgcc ggcggacgcc catcggcggg 481 tcagcggacg cctgcacatc tccctcaccc gcgtcagcga tcgctgcaac gtggtcatgt 541 cggagttcga ctcccgccag gagctcctcc aggccctcat gtgctcctgc ttcattcccg 601 gtctctcggg gctgcttccc ccgcaggtca aaggagttcg ctacatggat ggcgccttct 661 cgaacaatct gcctttgctg gacgagcaca ccgtgaccgt gagtcccttt tgcggggaga 721 gtgacatatg tccgcgggat cagagccccc atctgctgca gctgaacatc aattgggcca 781 acacttgcat ccggctgtcc aggaggaact taaggcggat ggtgcgaatc ctgctgccgg 841 gcagagcgga cttcatggcc aatttctgtc agcagggata cgacgatgcg ttgcactttc 901 tgcgccggaa tagcctgctc aaagagggat tcagggtcaa ggagaagatc atgatcagtt 961 ggatccatca gcaggaggag agggagagag cgcgaggcga gagccccagg gttttggaga 1021 aagctgttaa ggaaaagaag tcccaagagc agatggatag gaagcagaat cgcaggaatc 1081 gaaagcagaa gcctcaaagg caatatctgc agagtccttt gaaaaatcag caagagaaga 1141 agaatgtaag gagtcaggaa gaaaggatca ggaaagaaaa ctatccgaag aaagctacaa 1201 cgacgcggga gaatcatcta gagaagagcc taaatctgac gccccaggag gagcagcatt 1261 gctccctcat aggctccacc tggtcactcc tccgtcgcgt gatgaccgct ccgccgctgg 1321 ccaggcacat ggtccaaatg atcgcccgtc gcctcagccg cagtctcacg ctctgcgagc 1381 agccgcactt tgatctcgct ctgatgcagg caccctccac ctcctcctcg agcagccact 1441 gccccccatc gacgccactg ggtgatagcg ataacggtga tagcaaagtc aaggccaagc 1501 gagtgtgcga ggccagccaa gtggaagcgg gagatcagat ggctgaagac gagggacatt 1561 aggcgccaat ggccttatca gcgatcgtcg atcgatcagt tggcaattga ttttgatacc 1621 tgttaccgca attgctttga tttaattagc caactattcg gtggtttgtt ttcttgaata 1681 ttatgttcaa tgtttttagc ttgtgttttt tttattaact gctgtgtccg aaataaagcc 1741 taaaaaatgt gccgtaagct tgtagaaatg ggaaattttt attgcagttt aaaggcagaa 1801 aacttaagat caattttgtg tacctaattt ttttatatat aggcgtttta attactgatt 1861 gtgatatcaa atatttggtg gttttt