PREDICTED: Drosophila takahashii opossum (opm), mRNA.

LOCUS       XM_017137157            1198 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017137157
VERSION     XM_017137157.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137157.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1198
                     /gene="opm"
                     /note="opossum; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108054278"
     CDS             75..800
                     /gene="opm"
                     /codon_start=1
                     /product="transmembrane emp24 domain-containing protein 5"
                     /protein_id="XP_016992646.2"
                     /db_xref="GeneID:108054278"
                     /translation="MQAIWRGMPAGLLLLLLLLGGFIQDAEAYDKEMTVYVDAGKTEC
                     LYHSVRQGETIDFEYQVIDGGHGDLDISFTLLDPIGLVIVSDFKKPENVHRHEVAKEG
                     DYRFCFDNSFSMFNRKTVFFELIVEREGEELRGDAQWSEVDELTGLSRDEYYDMKVQD
                     IMDFIGRIRLQLNKARQLQDVLRSHEARDRNLAESNFQKVNHWSMLQISAMIGVGLIQ
                     VFMLRSIFATGGRMHNLWRKLGI"
     misc_feature    168..752
                     /gene="opm"
                     /note="emp24/gp25L/p24 family/GOLD; Region: EMP24_GP25L;
                     pfam01105"
                     /db_xref="CDD:426051"
     polyA_site      1198
                     /gene="opm"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attgtgcacg gcaaacggtc acactacctg ctcgagcatt ttgtattttt taattttagg
       61 ccaagcagct cacaatgcaa gcgatctggc ggggaatgcc tgcaggactc ctgctgctgc
      121 tgctgctgct cggcggcttc atccaggatg cggaggccta cgacaaggag atgaccgtct
      181 atgtggacgc cggcaagacg gagtgcctgt accactcggt gcgccagggc gagacgatcg
      241 actttgagta ccaggtgatc gacggcggcc acggcgacct ggacatcagc ttcaccctgc
      301 tggatcccat tggtctggtc atcgtgagcg acttcaagaa gccggagaac gtgcatcggc
      361 acgaggtggc caaggagggc gactatcggt tctgcttcga caacagcttc agcatgttca
      421 accgcaagac ggtcttcttc gagctgatcg tggagcgcga gggcgaggag ctgcgcggcg
      481 acgcccagtg gagcgaggtg gacgaactga cgggcctctc acgcgatgag tactacgaca
      541 tgaaggtgca ggacatcatg gacttcatcg gacgcatccg gctgcagctg aacaaggccc
      601 gccagctgca ggatgtcctg cgctcgcacg aggcacgtga tcgcaacctg gccgagtcca
      661 acttccagaa ggtcaaccac tggtccatgc tgcagatcag cgccatgatc ggcgtcggcc
      721 tcattcaggt ctttatgctg cgcagcatct tcgccaccgg cggacggatg cacaatctct
      781 ggcgcaagct gggcatttga tggaaaagaa ggaaaacgaa agcgaggaga agcctctacc
      841 aaagatgtgc gtgccggagg atgccacgag gatgcattta aaggccaacc ggcggctgga
      901 gcccctagtt agaatgtaat ttaacagaaa aaaaacacac acaaaacaca gaaacttgcc
      961 atcatcatat gtagttcgtt agtttccata tacatatata tataaattat cacgtattat
     1021 gtagccgaga tttagtattc cgcatattta tagatatgcg ggtgtgtgct tgtgatatac
     1081 cgggtgtgtt gtgtgtgctc ccgcgtttgg ggcagtgtta aacgaaagca attgtaccat
     1141 taagccagga gatgagtttg atattaaact taaagttgca ggaaccagtg taaaataa