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PREDICTED: Drosophila takahashii Dihydrolipoamide branched chain


LOCUS       XM_017137155            1867 bp    mRNA    linear   INV 09-DEC-2024
            transacylase E2 (Dbct), mRNA.
ACCESSION   XM_017137155
VERSION     XM_017137155.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137155.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1867
                     /gene="Dbct"
                     /note="Dihydrolipoamide branched chain transacylase E2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins"
                     /db_xref="GeneID:108054276"
     CDS             118..1485
                     /gene="Dbct"
                     /codon_start=1
                     /product="lipoamide acyltransferase component of
                     branched-chain alpha-keto acid dehydrogenase complex,
                     mitochondrial"
                     /protein_id="XP_016992644.2"
                     /db_xref="GeneID:108054276"
                     /translation="MATHLLRNGATCWLLRNCISRQATLRRCLHVTSSLDKSVSFHLS
                     DIGEGIREVTVKEWFVKVGDTVEQFDNLCEVQSDKASVTITSRYDGKITKLHHKIDEI
                     ALVGKPLVDFDVQDEEGDEAEDTSSSSESSASETEREKATGAVATSTGGRVITPATPS
                     VRRLAKEHQLDLAKVPATGKNGRVLKGDILEFLGQVPPGTNVPHPTLVAKKPEASVAA
                     PIPVPADRVEVLKGVRKAMLKSMTESLKIPHFAYSDEIDMTQLVQFRSQLQAVAKEHG
                     VPKLTFMPFCIKAASVALAKYPIVNSSLDLASESLIFRGSHNISVAIDTPQGLVVPNI
                     KNCQAKNIIEIAKDLNALVERGRTGSLSPSDFADGTFSLSNIGVIGGTYTHPCIMAPQ
                     VAIGAMGRTKAVPRFNNKDEVVKAYIMSVSWSADHRVIDGVTMASFSNVWKQYLEQPA
                     LFLLH"
     misc_feature    238..1482
                     /gene="Dbct"
                     /note="2-oxoisovalerate dehydrogenase E2 component;
                     Region: PLN02528"
                     /db_xref="CDD:215289"
     polyA_site      1867
                     /gene="Dbct"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttctgcaac tacaaaaaca cacacacaca cctgctcgat cgcatgaggc tataacccac
       61 gatccgaacc gatccgcgct atatcccgtg catttccagg ccccaaagtc ccgctaaatg
      121 gcaacacacc tgctccgcaa tggcgctacc tgttggctgc tcaggaactg catttcccgc
      181 caggcgacat tgagacgctg cctgcatgtg acctccagtc tggacaagtc ggtctccttc
      241 cacctcagcg acattggcga gggcattcgc gaggtgaccg tcaaggagtg gttcgtgaaa
      301 gtgggcgaca ccgtggagca gttcgacaac ctttgcgagg tgcagtcgga caaggcgtcg
      361 gtgaccatca ccagtcgcta cgatggcaag ataaccaagc tgcaccacaa gatcgatgag
      421 attgccctgg ttggcaagcc tctggtggat ttcgatgttc aggatgagga gggcgatgag
      481 gcagaggaca catcttcctc ctctgagagt tctgccagcg aaacggagcg ggagaaggcc
      541 actggagcag ttgccacctc cactggtggt cgtgtcatca cacccgccac gccctccgtt
      601 cgccgcctgg ccaaggagca ccagttggac ctggccaagg tgccggcgac gggcaagaat
      661 ggtcgtgtgc ttaagggcga tatcctggag ttcctaggac aggtgcctcc gggcaccaat
      721 gtgccgcatc ccacactggt ggccaagaag ccggaggctt ctgtagctgc tccaattcca
      781 gtgcccgccg atcgcgtgga ggtgctcaag ggagtgcgca aggccatgct gaagtcgatg
      841 acggaatccc tgaaaatccc gcactttgca tacagcgacg agatcgacat gacccagctg
      901 gtgcagttcc gcagccaact gcaggcggtg gccaaggagc acggtgtgcc caagctcaca
      961 ttcatgccct tctgcatcaa ggccgccagc gtggctttgg ccaagtatcc cattgttaac
     1021 agctcgctgg atttggccag cgaatcgctg atcttcaggg gatcgcacaa catcagcgtg
     1081 gccatcgata cgccacaggg tctggtggtg ccgaatatca agaactgcca ggcgaagaac
     1141 atcatcgaga tagccaagga cctgaatgca ctggtggagc gcggacgcac tggctcgctg
     1201 tccccgtcgg actttgccga cggcaccttc tcgctctcga acatcggagt tattggcggc
     1261 acctacacgc acccctgcat catggcgccc caggtggcca ttggggcgat gggcaggacc
     1321 aaggcggtgc cgcgcttcaa caacaaggac gaggtggtca aggcgtacat aatgagcgtc
     1381 agctggtccg ccgaccatcg cgtcatcgat ggcgtgacca tggccagctt ctcgaacgtc
     1441 tggaagcagt atctggagca gccggccctc ttcctgctgc actaggctgc ccgaaactaa
     1501 aagctaactc ccacggataa ggctgttcac ccgatgcatt tatctagaca tatctaactc
     1561 tgtaaattgt acgacaatcc gttttggtcc ggagcaagtg ccatgtgccg ccgcccatcc
     1621 ccgaaatgtg catttatagg aggcaagctg ctctgagcgg ctcctcgatt actttaagct
     1681 cctggcgcac atggctggcc ctccgtctac ctttgtcttt ttttttgttt acccgcattt
     1741 atatatcagt tttttcgtag tttgataagc agcagcttta gcgtacagtt caactgtagt
     1801 gtgtgcattt attttaaagc tttgttttaa tggctgtcca ataaatatcc caaacggttt
     1861 atgtgaa