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PREDICTED: Drosophila takahashii drop dead (drd), mRNA.


LOCUS       XM_017137146            3074 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017137146
VERSION     XM_017137146.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137146.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3074
                     /gene="drd"
                     /note="drop dead; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:108054271"
     CDS             149..2611
                     /gene="drd"
                     /codon_start=1
                     /product="nose resistant to fluoxetine protein 6"
                     /protein_id="XP_016992635.2"
                     /db_xref="GeneID:108054271"
                     /translation="MSSLGIWTLLLATIACGQGLEGVVQPTCNLKDNCNLGDNLLAAA
                     NSASDSGDVSADKLESKIASIFEDKVNYSLKLFADDATTTILEYQTANLSQLHGNYTI
                     QQLEQVSLADEEDDQVEEDERVYLYNIGKRFLAITQPFDSARNPDASSLCRRQMHQFL
                     NALDNFDLWALKMHDASGKLNSGILNGNINQPGDFDQCLGIQHRMRDQEGAQDQDEDS
                     IIRGQYCLAYAQPVLPHNSKRLQSFFKLIQSHGPFKSEFNDPGHRVPRYSLINWGLCV
                     PSGCSARDVEYSVAEFLGNQTASTGITFNVRVEPQMCQVRDQRPWDRNTTWAVRFFLL
                     VLSVALLSTIYDRSTKSQPKQNAWFTAFSLDKNLRWLFSTSSAPGDIEAVHGIRFLNA
                     IMLIFSHKSMAMFFNPYNNRTAMSESLGQPWTVIGRAASLYTDPFLLFSGMLTAYSLF
                     GRLMKQQPIRLKNEYISRLMRIVPPLAALILFCTYVLPLWGSGPQWNLVVGHHADICK
                     KNWWRNLLFIHNYFGFSEMCLTHTHHLGIDTELFAVAPLLILGLWRWPRRGLFTLLLL
                     CTVGTAARYYTTIVNQLSNYIYFGTNIQRLFRTADYMYSFPPHRSTVYIMGILLGYVL
                     RKYQNARLSSLQLRLGWLVATVCVLASLLGPAPMGHIDYVYNSTHAAIYAAFAPIAWC
                     LFFSWIVFVSHNGYTNKLTKLFAWRGFQVSTKLSYAIYLTQFPVFFFNVGRRRHIHHY
                     YNFVSIILDTNEFISIFLASVALTVLFDAPFQNLKKLLIKRPSPSSAKVVKDNTAAQD
                     ATTTLASKPSSTALLQSHPHSD"
     misc_feature    602..1015
                     /gene="drd"
                     /note="Nose resistant-to-fluoxetine protein, N-terminal
                     domain; Region: NRF; pfam20146"
                     /db_xref="CDD:466307"
     misc_feature    1268..2506
                     /gene="drd"
                     /note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains
                     acyltransferase and SGNH-hydrolase domains [Cell
                     wall/membrane/envelope biogenesis]; Region: OafA; COG1835"
                     /db_xref="CDD:441440"
     polyA_site      3074
                     /gene="drd"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attttttttt aagaaatata tattccgcag atattgaaaa agtttttttt tctggtgtgc
       61 ccccgtttgt atccttttat tcttgccggc gattatgttt atgtgaaaaa aaatattgaa
      121 agagaaaata cgaaggatcc ccgacaggat gtcgtctctg ggtatttgga ccctgctcct
      181 ggccaccatc gcctgtggtc aggggctcga gggggtggtg cagcccacct gcaatctcaa
      241 ggacaactgc aatttgggcg acaatctgct ggccgcagcg aattccgcct ccgattcggg
      301 cgatgtgtcc gccgataagc tggagagcaa aatcgcctcg atcttcgagg ataaggtcaa
      361 ctatagtctg aagctatttg ccgacgatgc gaccaccacg atcctggaat atcagacggc
      421 caatctgagc caattgcacg ggaactacac gatacagcag ctggaacagg tatcgctggc
      481 cgatgaggag gacgatcagg tggaggagga tgagagggtt tacttgtaca acattggaaa
      541 gcgttttctg gccattacgc aaccttttga ttccgccaga aatccggatg cctcgtcgtt
      601 atgtcgtcgg cagatgcatc agtttctgaa cgccttggac aacttcgatc tgtgggcatt
      661 gaagatgcac gatgccagcg gcaaattgaa ctcgggcatt ttgaatggca acatcaatca
      721 gcccggcgat ttcgatcagt gcctgggaat tcaacatcgg atgagggatc aggaaggggc
      781 ccaggatcag gatgaggact ccattatccg cggccagtat tgtttggcct acgctcagcc
      841 agttcttccg cacaattcga agcgactgca gagcttcttc aagctgatcc aatcccacgg
      901 acctttcaaa agcgagttca atgaccccgg tcaccgagtg ccccgctact cgctgatcaa
      961 ctggggcctc tgcgtgccct cgggctgctc ggctcgggat gtggagtaca gtgtggccga
     1021 gttcctgggc aaccagaccg cctcgacggg catcaccttc aatgttcgcg tggagcccca
     1081 gatgtgccag gtgcgggatc agcggccctg ggacaggaac accacctggg cagtgcgctt
     1141 cttcctactc gtcctctccg tggcactcct gtccaccatc tacgatcgat ccaccaagtc
     1201 gcagcccaag cagaacgcct ggttcacggc cttttcgctg gacaagaacc tccgctggct
     1261 gttcagcacg agcagtgctc ccggggacat cgaggcggtc catggcattc gcttcctgaa
     1321 cgccatcatg ctgatctttt cgcacaagtc gatggccatg ttcttcaatc cgtacaacaa
     1381 ccgcacggcc atgtcggaga gtctgggtca gccgtggacg gtgattggac gagcggcctc
     1441 cctgtacacc gatcccttcc tgctcttcag tggaatgctg acggcctatt cgcttttcgg
     1501 tcgactcatg aagcagcagc ccatcaggct gaagaacgag tacattagcc ggctgatgag
     1561 gattgttccg cccctggccg ccctgatcct cttctgcacg tacgtgctgc ccctgtgggg
     1621 cagtggaccc cagtggaacc tggtggtggg ccaccatgcg gacatctgca agaagaactg
     1681 gtggcgcaac ctgctcttca tccacaacta ctttggcttt agcgaaatgt gcctgacgca
     1741 cacgcaccat ctgggcatcg acaccgaact cttcgcggtg gctcccctgc tcatcctggg
     1801 actttggcgg tggccccggc ggggtctctt caccctcctg cttctctgca ccgtgggaac
     1861 ggcggccagg tactacacaa cgattgtcaa ccagctgtcc aactatatct actttggcac
     1921 caacatccag cgactcttcc gcaccgcaga ctacatgtac tcgttcccgc cccaccgctc
     1981 cacggtgtac atcatgggca tcctgctggg ctacgtgctg cgcaagtacc agaacgccag
     2041 gctgagcagc ctgcagctgc gcctcggctg gctggtggcc accgtctgcg tcctggcctc
     2101 cctcctggga cccgcgccca tggggcacat cgactacgtg tacaactcca cgcatgcggc
     2161 catttacgcc gcctttgcgc cgattgcctg gtgtctgttc ttctcctgga tcgtctttgt
     2221 ctctcataat ggctatacaa ataaactgac gaagctgttc gcctggcgcg gcttccaggt
     2281 gtccacgaag ctctcgtacg ccatttacct gacgcagttc cccgtgttct tctttaacgt
     2341 cggccgaagg cgtcacattc accactacta caactttgtt tcgattattc tcgataccaa
     2401 cgaattcata tcgatcttcc tggcctccgt ggccctgacg gtgctcttcg acgcgccctt
     2461 ccagaatctg aagaagctgc tcatcaagcg accctctcct tcttctgcga aggtggttaa
     2521 ggataatacg gccgcccagg atgcgacgac gacactagcc tcaaagccca gcagcactgc
     2581 cctcctccaa tcgcatccac actccgatta gtctggacac acacaccctt tcttagctat
     2641 gtaacttgta aatgtcttag catttagtgg caatatgttt agtaacccca gcgaaatccc
     2701 caatatccca taccccatgt atttcccatc caatccgtcc atccatcacg agtcccaaga
     2761 attcccgccc ttagttttag tggaacgctt tatacattgt aaattgtact gttagtcaaa
     2821 tcgagcgaca aatgagaacc gaaccgattc gtagtcataa accaatcaat cactgcttga
     2881 tgtacgatat tatcttgctt gctaaaccgg gcttcgagag gaagtcatcg ctggtccccg
     2941 agttaaatgg tccccagact gagactctcg gaacccatgt tttcttagaa tacttacgtt
     3001 accttaagcg aggtcgaatg tcagtttttt taatggtaat ttaattaata aaatatataa
     3061 atatgttaca aaaa