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LOCUS XM_017137144 5016 bp mRNA linear INV 09-DEC-2024 (LOC108054270), transcript variant X3, mRNA. ACCESSION XM_017137144 VERSION XM_017137144.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137144.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5016 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5016 /gene="LOC108054270" /note="uncharacterized LOC108054270; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054270" CDS 575..3961 /gene="LOC108054270" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_016992633.2" /db_xref="GeneID:108054270" /translation="MHRTQPSLPLPLPLLALALASALAFAQAQNIDAGSCSFPGSPAH SSVVFSNANLTQGTVASYSCERGFELLGPARRVCDKGQWVPEGIPFCVLNVAAGKAPM QISTDGAGAPQKAIDGSTSAFFTPETCSLTKAERSPWWYVNLLEPYMVQLVRLDFGKS CCGNKPATIVVRVGNNRPDLGTNPICNRFTGLLEAGQPLFLPCNPPMPGAFVSVHLEN STPNPLSICEAFVYTDQALPIERCPTFRDQPPGALASYNGKCYIFYNRQPLNFLDALS FCRSRGGTLISESNPALQGFISWELWRRHRSDVSSQYWMGAVRDGSDRSSWKWVNGDE LTVSFWSHPGGDEDCARFDGSKGWLWSDTNCNTLLNFICQHQPKTCGRPEQPPNSTMV ALNGFEVGAQIKYSCDANHLLVGPATRTCLETGFYNEFPPVCKYIECGLPASIAHGSY GLLNNTVGYLSLVKYSCEEGYEMIGRALLTCDFDERWNGPPPRCEIVECDTLPGNYYS TIIHAPNGTYYGSKAEISCPPGYRMEGPRVLSCLASGQWSSALPRCIKLEPSTQPTAA STIPVPSSVATPPPFRPKVVSSTTNRTPYRPPVVSTASSGISGSSTSTVGTYPSLSPT QVEINGESESEEEINVPPVPGTVREEFPPRRTVRPVLIPKKPSSTPAALPPTTTHQVP QPPSTYAPTPPRSSRPSGAPNQVETTTRNTQQIIANSHPQDNEIPDSVNIQQNQSPNV NVPFAVDNPDRKETKEAKLNLGAIVALGAFGGFVFLAAVITTIVILVRSTPNSQRRHL AKHLTAYQHHHAHHHHHQQIHQLQHLQKYLPQQQFQKYHPQQQYEQPQAKKSQGIAGI GIGFGISGTGSRSRSRSGIPRPSRLPSYATATATSATSYASTAQLTGGSSGDRERDGG MDRERDGNRDHPSLWYSVLALPFDDQKLGRREFSSYGRGYRARAGLFSSSHINRTTQH YRHRASPDCNTVASFDSSTSGSRNGLNRYYRQAWENLHESASKNSSHNALRRKETLDP PSMTRSRDNLRDNMQRSRENLDRCGRDNYGMRDDSEMVVSSVVSDVCLKGEKKRHHHH HHKSSSRNGDYRDRDQSSGRREHHRHSGGGGGGGGGGGHY" misc_feature 680..850 /gene="LOC108054270" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(710..712,767..769) /gene="LOC108054270" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 851..1297 /gene="LOC108054270" /note="eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain; Region: FTP; smart00607" /db_xref="CDD:128870" misc_feature 1337..1696 /gene="LOC108054270" /note="C-type lectin (CTL) or carbohydrate-recognition domain (CRD); Region: CLECT; smart00034" /db_xref="CDD:214480" misc_feature order(1613..1615,1625..1627,1631..1633,1649..1651, 1655..1666,1673..1681) /gene="LOC108054270" /note="ligand binding surface [chemical binding]; other site" /db_xref="CDD:153057" misc_feature <1673..2242 /gene="LOC108054270" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature <2213..2677 /gene="LOC108054270" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" polyA_site 5016 /gene="LOC108054270" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgctttcga gctgcacaag gcgacggttt aagtttttgg cgcttactgg gtgaaaaacg 61 agaaagagag agagagagag actgtctctg cagagagccc caaagagagc gaaaagtgaa 121 agaccgagaa accagcgaag aattcttcgt gcgcgctcgc cgacttcaaa taacttcagt 181 cgccctgcag aattcccagc gatcggttca tgcagcggat tatcgcgcgt cgcgaaccat 241 taaaaatatt tttactttaa aaaatatatt atattttttt caagttcggt gctctcgtgc 301 agtgtgatct tttttttttt ttttggttta tcaaatatca agtatcgagt atcgaacccc 361 ccacttcctg gcatgtcgtt caaacaatcc gaaactcgtg cccagtgcta aaatcccaag 421 gaagttcaca agtgtgccaa aacaaattgc aaagtccagc gaaaaccccc aagaaaccaa 481 tataataaac cacaaataaa taagaaaatc aaatagaata aaaacacaaa cttaaataaa 541 cggacggaca gcaggtgtga gcgagagagc aacaatgcac cgcacgcagc cgtcgctgcc 601 tctgccgctg cctctgctgg cgttggcgtt ggcgtcggcg ctggcttttg cgcaggcgca 661 gaatatagat gccggcagtt gcagcttccc gggatcgccg gcccacagca gcgtggtctt 721 ctcgaatgcg aatctcaccc agggcacggt ggcctcctac agctgcgagc gcggcttcga 781 gctcctggga ccggcgagac gcgtctgcga caaggggcag tgggtgcccg agggcattcc 841 gttctgcgtc ttaaatgtgg ccgctggcaa ggcgcccatg cagatttcca ccgatggcgc 901 cggtgctccg caaaaggcca tcgacggctc cacgtccgcc ttcttcaccc cggagacctg 961 ctccctgacg aaggcggagc gatcgccctg gtggtatgtc aacctcctgg agccctacat 1021 ggtccaactg gtgcgtctgg actttggcaa atcctgctgc ggcaacaagc cggccaccat 1081 tgtggtgcgg gtgggcaaca accgtccgga tttgggcacg aatccgatct gcaatcgctt 1141 cacgggcctc ctggaggccg ggcagccgct cttcctgccc tgcaatccgc cgatgcccgg 1201 tgccttcgtg agcgtccacc tggagaacag cacgccgaat ccgctgtcca tctgcgaggc 1261 gttcgtctac acggaccagg cgctgcccat cgagcggtgt cccacgttca gggatcagcc 1321 gccgggagcg ctggcctcgt acaacggcaa gtgctacatc ttctacaacc gccagccgct 1381 gaacttcctg gacgccctgt ccttctgccg ttcccgcggt ggcacgctga tcagcgagag 1441 caatccggcg ctgcagggct tcatcagctg ggagctgtgg cggcgccacc gcagcgacgt 1501 cagctcgcag tactggatgg gggcggtgcg cgacggcagc gatcgcagca gctggaaatg 1561 ggtcaacggc gacgagctga ccgtctcctt ctggagtcat ccgggtggcg atgaggattg 1621 cgctcggttt gatggatcca agggatggct gtggagcgac accaactgca acacgctgct 1681 gaacttcatc tgccagcacc agccgaagac ctgcggccgc cccgagcagc cgcccaattc 1741 cacgatggtg gccctgaatg gattcgaggt gggcgcccag atcaagtaca gctgcgatgc 1801 caaccacctg ctggtgggtc ctgccacgag gacctgtctg gagacgggat tctacaacga 1861 gtttccgccg gtctgcaagt atatcgaatg tggtcttccg gccagcattg cccatggatc 1921 ctatggcctg ctgaacaata ccgtgggcta cctgagcctg gtgaagtact cctgcgagga 1981 gggctacgag atgataggac gcgccctgct cacctgcgat ttcgatgagc gctggaacgg 2041 accgccgccg cgctgcgaga ttgtggagtg cgacacactg cctggaaatt actacagcac 2101 cattatccat gctccgaatg gcacgtacta tggctccaag gcggagatca gttgtccgcc 2161 cggatatcgc atggagggac ctcgggtgct cagctgcttg gccagcggcc agtggagcag 2221 cgccctgccg cgttgcatca agctggagcc ctccacgcag cccacggccg cctccaccat 2281 tccggtgccc tcgtcggtgg ccacgccgcc gcccttccgg cccaaggtcg tcagctcgac 2341 caccaaccgc accccctacc gcccaccggt ggtctccacc gccagcagcg gcatcagcgg 2401 cagctccacc agcacagtgg gcacttatcc cagtctcagt cccacgcagg tggagatcaa 2461 cggcgaatct gaatccgagg aggagatcaa tgtgccgcca gtgcccggaa ccgttcgcga 2521 ggagttcccg ccccgccgca ccgtccgtcc agtgctcatc ccgaagaagc cgagcagcac 2581 gccggcggcc ctgccaccca ccaccaccca ccaggtgccg cagccaccct ccacctacgc 2641 acccacaccg ccgcgcagct cgcggcccag cggggcaccc aaccaggtgg agaccaccac 2701 ccggaacacg cagcagatca tcgccaactc gcatccgcag gacaacgaga tccccgacag 2761 cgtcaacatc cagcagaacc agtcgcccaa tgtcaacgtg ccattcgccg tcgacaatcc 2821 cgaccgcaag gagaccaagg aggccaagct caatctgggc gccatcgtgg ctctgggcgc 2881 ttttggtggc ttcgtcttcc tggccgccgt catcaccacg atcgtgatcc tcgtgcgaag 2941 caccccgaac agccaacggc ggcacctagc caaacactta accgcttacc aacatcatca 3001 tgctcatcat caccaccacc agcagatcca tcagttgcag cacctccaga agtacctccc 3061 acagcagcag ttccagaagt accacccaca gcagcagtac gaacaaccgc aagcgaagaa 3121 gtcgcaggga atcgcaggga tcgggatcgg cttcgggatt tcgggaacgg gatcgagatc 3181 gagatcgaga tcgggaatac cgaggcccag tcgattgccc agctatgcca cggcgacggc 3241 caccagtgcc accagctatg cctccaccgc ccaactgacg ggaggttcga gtggcgatag 3301 agaaagagac gggggtatgg atcgcgagag agatggcaat agggatcatc catccctgtg 3361 gtacagcgtt ctcgctctgc ccttcgacga tcagaagctg ggacgtcgcg agttcagcag 3421 ctatgggcgt ggctatcgcg cccgcgccgg actcttcagc agctcccata taaatcgaac 3481 cacgcaacac tatcgccatc gcgcctcgcc cgactgcaac acagtggcca gcttcgatag 3541 ctccacctcg ggatcccgaa atggactcaa caggtactac cgccaagcct gggagaacct 3601 gcacgagtcc gcctcgaaga acagctcgca caacgccctg cgccgcaagg agaccctcga 3661 tccgcccagt atgacccgat cccgtgacaa tctgcgcgac aatatgcagc gctcccgcga 3721 aaatcttgat agatgcggca gggacaacta tggcatgcgg gatgactccg aaatggtggt 3781 ctcctcggtg gtgtccgatg tgtgcctgaa gggcgagaag aagcgccacc accaccatca 3841 ccacaagagc agctcccgca acggcgacta ccgcgatcgg gatcagtcct ccggcaggcg 3901 agagcaccac cgacacagcg gaggcggagg aggcggaggc ggcggtggcg gccactattg 3961 accaaccatg gtcatcacca tcaacttgga gcggcagtag ccaaacgaac gagtagtcga 4021 gtaggccagc agtcggcgta gaaatcggat tcggatttgg atttgaattt gaatttaagt 4081 taggattcag attctggaaa tcgcaatctg agtgctgcaa agcgagcgca acaacgaaac 4141 gttttttgtt taattttagc aacagttttt tttcgcgctt tagttatgta agccagttga 4201 tatcgagatc gagaaaaaaa agagggttcg gccaatgtgg aggagacttt tctgttcata 4261 gtgaaaaaac cagatgttaa acaagcagcg caagagatcc tttaacttgc aagtcaatac 4321 ttagctatat actcgtatgc gatgtttatt cggggcgcaa gacggaggac tctggagatt 4381 taggaaccat agattatatc tagagataat tctcaagtta tacaatattt tttagatttt 4441 tttataggtt cctaactctt tagagctccg tggaagcgcg ccccccttat aagatttttg 4501 atccgaactc gtataattta ttcgcaaagc tttcgtacgg ttcttagtta aattttctct 4561 atgaattagt tgtatgttgt aggcgtgaac agggcagaaa ggcgaggcgt agtaattagt 4621 tgcaaggcac cagcatccac acacccacat aaactcccca ttttcccatc tccacgcccc 4681 caaagcgaac cacccacttt tcacccagca agcagatcac acagctgcag ccaaattatg 4741 tgcaacttgg tttcgtttga ggtctcaagc caaatcgact tgctcatagt cgcaaattag 4801 ttacgtaaac acacttacac tagatagaac tatccatcca ttcctcgaga aaaatccaaa 4861 ataatatcgt agtacgtgtg ccacagaaat tactgtataa agaatatctg cacaggatcg 4921 gaagagtata tcatttttta ccccaagcac caagctgcac cattccatta ttttttttac 4981 ctacccatta ttttatgtat gtgtatcgta tcgccc