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LOCUS XM_017137143 4485 bp mRNA linear INV 09-DEC-2024 (LOC108054270), transcript variant X2, mRNA. ACCESSION XM_017137143 VERSION XM_017137143.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137143.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4485 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4485 /gene="LOC108054270" /note="uncharacterized LOC108054270; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054270" CDS 575..3430 /gene="LOC108054270" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_016992632.2" /db_xref="GeneID:108054270" /translation="MHRTQPSLPLPLPLLALALASALAFAQAQNIDAGSCSFPGSPAH SSVVFSNANLTQGTVASYSCERGFELLGPARRVCDKGQWVPEGIPFCVLNVAAGKAPM QISTDGAGAPQKAIDGSTSAFFTPETCSLTKAERSPWWYVNLLEPYMVQLVRLDFGKS CCGNKPATIVVRVGNNRPDLGTNPICNRFTGLLEAGQPLFLPCNPPMPGAFVSVHLEN STPNPLSICEAFVYTDQALPIERCPTFRDQPPGALASYNGKCYIFYNRQPLNFLDALS FCRSRGGTLISESNPALQGFISWELWRRHRSDVSSQYWMGAVRDGSDRSSWKWVNGDE LTVSFWSHPGGDEDCARFDGSKGWLWSDTNCNTLLNFICQHQPKTCGRPEQPPNSTMV ALNGFEVGAQIKYSCDANHLLVGPATRTCLETGFYNEFPPVCKYIECGLPASIAHGSY GLLNNTVGYLSLVKYSCEEGYEMIGRALLTCDFDERWNGPPPRCEIVECDTLPGNYYS TIIHAPNGTYYGSKAEISCPPGYRMEGPRVLSCLASGQWSSALPRCIKLEPSTQPTAA STIPVPSSVATPPPFRPKVVSSTTNRTPYRPPVVSTASSGISGSSTSTVGTYPSLSPT QVEINGESESEEEINVPPVPGTVREEFPPRRTVRPVLIPKKPSSTPAALPPTTTHQVP QPPSTYAPTPPRSSRPSGAPNQVETTTRNTQQIIANSHPQDNEIPDSVNIQQNQSPNV NVPFAVDNPDRKETKEAKLNLGAIVALGAFGGFVFLAAVITTIVILVRRNRTTQHYRH RASPDCNTVASFDSSTSGSRNGLNRYYRQAWENLHESASKNSSHNALRRKETLDPPSM TRSRDNLRDNMQRSRENLDRCGRDNYGMRDDSEMVVSSVVSDVCLKGEKKRHHHHHHK SSSRNGDYRDRDQSSGRREHHRHSGGGGGGGGGGGHY" misc_feature 680..850 /gene="LOC108054270" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(710..712,767..769) /gene="LOC108054270" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 851..1297 /gene="LOC108054270" /note="Sad1 / UNC-like C-terminal; Region: Sad1_UNC; cl23730" /db_xref="CDD:474037" misc_feature 1337..1696 /gene="LOC108054270" /note="C-type lectin (CTL) or carbohydrate-recognition domain (CRD); Region: CLECT; smart00034" /db_xref="CDD:214480" misc_feature order(1613..1615,1625..1627,1631..1633,1649..1651, 1655..1666,1673..1681) /gene="LOC108054270" /note="ligand binding surface [chemical binding]; other site" /db_xref="CDD:153057" misc_feature <1673..2242 /gene="LOC108054270" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature <2213..2677 /gene="LOC108054270" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" polyA_site 4485 /gene="LOC108054270" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgctttcga gctgcacaag gcgacggttt aagtttttgg cgcttactgg gtgaaaaacg 61 agaaagagag agagagagag actgtctctg cagagagccc caaagagagc gaaaagtgaa 121 agaccgagaa accagcgaag aattcttcgt gcgcgctcgc cgacttcaaa taacttcagt 181 cgccctgcag aattcccagc gatcggttca tgcagcggat tatcgcgcgt cgcgaaccat 241 taaaaatatt tttactttaa aaaatatatt atattttttt caagttcggt gctctcgtgc 301 agtgtgatct tttttttttt ttttggttta tcaaatatca agtatcgagt atcgaacccc 361 ccacttcctg gcatgtcgtt caaacaatcc gaaactcgtg cccagtgcta aaatcccaag 421 gaagttcaca agtgtgccaa aacaaattgc aaagtccagc gaaaaccccc aagaaaccaa 481 tataataaac cacaaataaa taagaaaatc aaatagaata aaaacacaaa cttaaataaa 541 cggacggaca gcaggtgtga gcgagagagc aacaatgcac cgcacgcagc cgtcgctgcc 601 tctgccgctg cctctgctgg cgttggcgtt ggcgtcggcg ctggcttttg cgcaggcgca 661 gaatatagat gccggcagtt gcagcttccc gggatcgccg gcccacagca gcgtggtctt 721 ctcgaatgcg aatctcaccc agggcacggt ggcctcctac agctgcgagc gcggcttcga 781 gctcctggga ccggcgagac gcgtctgcga caaggggcag tgggtgcccg agggcattcc 841 gttctgcgtc ttaaatgtgg ccgctggcaa ggcgcccatg cagatttcca ccgatggcgc 901 cggtgctccg caaaaggcca tcgacggctc cacgtccgcc ttcttcaccc cggagacctg 961 ctccctgacg aaggcggagc gatcgccctg gtggtatgtc aacctcctgg agccctacat 1021 ggtccaactg gtgcgtctgg actttggcaa atcctgctgc ggcaacaagc cggccaccat 1081 tgtggtgcgg gtgggcaaca accgtccgga tttgggcacg aatccgatct gcaatcgctt 1141 cacgggcctc ctggaggccg ggcagccgct cttcctgccc tgcaatccgc cgatgcccgg 1201 tgccttcgtg agcgtccacc tggagaacag cacgccgaat ccgctgtcca tctgcgaggc 1261 gttcgtctac acggaccagg cgctgcccat cgagcggtgt cccacgttca gggatcagcc 1321 gccgggagcg ctggcctcgt acaacggcaa gtgctacatc ttctacaacc gccagccgct 1381 gaacttcctg gacgccctgt ccttctgccg ttcccgcggt ggcacgctga tcagcgagag 1441 caatccggcg ctgcagggct tcatcagctg ggagctgtgg cggcgccacc gcagcgacgt 1501 cagctcgcag tactggatgg gggcggtgcg cgacggcagc gatcgcagca gctggaaatg 1561 ggtcaacggc gacgagctga ccgtctcctt ctggagtcat ccgggtggcg atgaggattg 1621 cgctcggttt gatggatcca agggatggct gtggagcgac accaactgca acacgctgct 1681 gaacttcatc tgccagcacc agccgaagac ctgcggccgc cccgagcagc cgcccaattc 1741 cacgatggtg gccctgaatg gattcgaggt gggcgcccag atcaagtaca gctgcgatgc 1801 caaccacctg ctggtgggtc ctgccacgag gacctgtctg gagacgggat tctacaacga 1861 gtttccgccg gtctgcaagt atatcgaatg tggtcttccg gccagcattg cccatggatc 1921 ctatggcctg ctgaacaata ccgtgggcta cctgagcctg gtgaagtact cctgcgagga 1981 gggctacgag atgataggac gcgccctgct cacctgcgat ttcgatgagc gctggaacgg 2041 accgccgccg cgctgcgaga ttgtggagtg cgacacactg cctggaaatt actacagcac 2101 cattatccat gctccgaatg gcacgtacta tggctccaag gcggagatca gttgtccgcc 2161 cggatatcgc atggagggac ctcgggtgct cagctgcttg gccagcggcc agtggagcag 2221 cgccctgccg cgttgcatca agctggagcc ctccacgcag cccacggccg cctccaccat 2281 tccggtgccc tcgtcggtgg ccacgccgcc gcccttccgg cccaaggtcg tcagctcgac 2341 caccaaccgc accccctacc gcccaccggt ggtctccacc gccagcagcg gcatcagcgg 2401 cagctccacc agcacagtgg gcacttatcc cagtctcagt cccacgcagg tggagatcaa 2461 cggcgaatct gaatccgagg aggagatcaa tgtgccgcca gtgcccggaa ccgttcgcga 2521 ggagttcccg ccccgccgca ccgtccgtcc agtgctcatc ccgaagaagc cgagcagcac 2581 gccggcggcc ctgccaccca ccaccaccca ccaggtgccg cagccaccct ccacctacgc 2641 acccacaccg ccgcgcagct cgcggcccag cggggcaccc aaccaggtgg agaccaccac 2701 ccggaacacg cagcagatca tcgccaactc gcatccgcag gacaacgaga tccccgacag 2761 cgtcaacatc cagcagaacc agtcgcccaa tgtcaacgtg ccattcgccg tcgacaatcc 2821 cgaccgcaag gagaccaagg aggccaagct caatctgggc gccatcgtgg ctctgggcgc 2881 ttttggtggc ttcgtcttcc tggccgccgt catcaccacg atcgtgatcc tcgtgcgaag 2941 aaatcgaacc acgcaacact atcgccatcg cgcctcgccc gactgcaaca cagtggccag 3001 cttcgatagc tccacctcgg gatcccgaaa tggactcaac aggtactacc gccaagcctg 3061 ggagaacctg cacgagtccg cctcgaagaa cagctcgcac aacgccctgc gccgcaagga 3121 gaccctcgat ccgcccagta tgacccgatc ccgtgacaat ctgcgcgaca atatgcagcg 3181 ctcccgcgaa aatcttgata gatgcggcag ggacaactat ggcatgcggg atgactccga 3241 aatggtggtc tcctcggtgg tgtccgatgt gtgcctgaag ggcgagaaga agcgccacca 3301 ccaccatcac cacaagagca gctcccgcaa cggcgactac cgcgatcggg atcagtcctc 3361 cggcaggcga gagcaccacc gacacagcgg aggcggagga ggcggaggcg gcggtggcgg 3421 ccactattga ccaaccatgg tcatcaccat caacttggag cggcagtagc caaacgaacg 3481 agtagtcgag taggccagca gtcggcgtag aaatcggatt cggatttgga tttgaatttg 3541 aatttaagtt aggattcaga ttctggaaat cgcaatctga gtgctgcaaa gcgagcgcaa 3601 caacgaaacg ttttttgttt aattttagca acagtttttt ttcgcgcttt agttatgtaa 3661 gccagttgat atcgagatcg agaaaaaaaa gagggttcgg ccaatgtgga ggagactttt 3721 ctgttcatag tgaaaaaacc agatgttaaa caagcagcgc aagagatcct ttaacttgca 3781 agtcaatact tagctatata ctcgtatgcg atgtttattc ggggcgcaag acggaggact 3841 ctggagattt aggaaccata gattatatct agagataatt ctcaagttat acaatatttt 3901 ttagattttt ttataggttc ctaactcttt agagctccgt ggaagcgcgc cccccttata 3961 agatttttga tccgaactcg tataatttat tcgcaaagct ttcgtacggt tcttagttaa 4021 attttctcta tgaattagtt gtatgttgta ggcgtgaaca gggcagaaag gcgaggcgta 4081 gtaattagtt gcaaggcacc agcatccaca cacccacata aactccccat tttcccatct 4141 ccacgccccc aaagcgaacc acccactttt cacccagcaa gcagatcaca cagctgcagc 4201 caaattatgt gcaacttggt ttcgtttgag gtctcaagcc aaatcgactt gctcatagtc 4261 gcaaattagt tacgtaaaca cacttacact agatagaact atccatccat tcctcgagaa 4321 aaatccaaaa taatatcgta gtacgtgtgc cacagaaatt actgtataaa gaatatctgc 4381 acaggatcgg aagagtatat cattttttac cccaagcacc aagctgcacc attccattat 4441 tttttttacc tacccattat tttatgtatg tgtatcgtat cgccc