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LOCUS XM_017136851 2124 bp mRNA linear INV 09-DEC-2024 biosynthesis class T (PIG-T), mRNA. ACCESSION XM_017136851 VERSION XM_017136851.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017136851.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2124 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2124 /gene="PIG-T" /note="phosphatidylinositol glycan anchor biosynthesis class T; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054091" CDS 148..2022 /gene="PIG-T" /codon_start=1 /product="GPI transamidase component PIG-T" /protein_id="XP_016992340.2" /db_xref="GeneID:108054091" /translation="MFPEAFVLLLLLALNAGSPLGKDDERFHEELVVRPLAGDHVNTY FQFTTRWHYGEKDNLYHTQLTPRVIAELLQQFAVKELHIGLTQGLWRYETWGYPIVEA TSGAEMWAWFSGANLTNSEVDRQWKELANVFSGVLCASLNFVDQTNSIAPRHLIRPQF MPANGKRFVRYSTLPREIVCTENLTPWKKLLPCGSASGFASLLNSGHVHNTKYHSLGL KVRVLCEDHDEDNCIVELTQTANLVYDLRLFELSNTDFSLRRLFGMGLNGFCELAESS KLYVQRSEQGERFQLVPAAEQEVKSTRGGHSVTYSVYDMHEQFKEAGERLFNVAWLSP KSDSHRRRNLAKPSLPPVTVHRYLLGNGQERGRICTEVTNSHYDALPILVQEVIPWYV HAYLHTLTIRRKPQRLNEYARQRLPFKLLHYAPGKQRELPSHLEIGFMLPGQTSALIT IDVDYLLLKWLEYPPDANHGHYIGAAIVSSQLPMGRNYTALPPEGHLFEHSFNATRPS YVLSLHTEALIVSLPTPDFSMPYNVICLACTVVALAFGPIHSVATKMIIVGRQASAPK NFVKKIFNKIFRRNKANSDEVAAEGESPGIARAERSTGGPSGDQPLLEDLDEEEEEQD " misc_feature 226..1809 /gene="PIG-T" /note="Gpi16 subunit, GPI transamidase component; Region: Gpi16; pfam04113" /db_xref="CDD:461180" polyA_site 2124 /gene="PIG-T" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cactgtcgat gtgcagctcc tgacatcgat agcatctgtt gttaattaaa ttttagttta 61 cgattaaaat acatttgcat ttagaggata ttgtcggtgc aaccgaagcg aattacaagt 121 ggcgaaagtg gaaattggca ggagaggatg tttccggagg cgtttgtcct gctgctgctg 181 ctggcactaa atgccggctc gccgctgggc aaggatgacg aacgattcca cgaggagctg 241 gtggtgcgcc cgctggccgg cgaccatgtc aacacctact tccagttcac cacgcgctgg 301 cactacgggg agaaggataa tctttaccac acccaactga cgccccgtgt gattgcggag 361 ctgctgcagc agttcgcggt gaaggagctg cacatcggac tcacgcaggg cctgtggcgc 421 tacgagacgt ggggctatcc cattgtggag gccaccagcg gcgccgagat gtgggcctgg 481 ttcagtggcg caaatttaac caacagcgag gtggatcgcc agtggaagga gctggccaac 541 gttttctccg gcgttctctg cgcctcacta aacttcgtgg accaaacgaa cagcatagca 601 ccgcgtcacc tgattcgtcc gcaatttatg cccgccaatg gcaagagatt cgttcgctac 661 tccactttgc cgcgggagat tgtgtgcact gagaatctga cgccctggaa gaagctactc 721 ccctgcggca gtgcctctgg ctttgcttcg cttttaaact ccggtcatgt gcacaatacc 781 aagtaccatt cgctgggctt gaaagtccgg gtgctttgcg aggatcacga cgaggacaat 841 tgcattgtgg agctcacgca aacggccaat ttggtctacg atctgcgcct gttcgagctg 901 agcaacacgg acttctcgct gcgccgcctg ttcggcatgg gactgaacgg cttctgtgag 961 ctggccgaga gctccaagct gtatgtgcag cgcagcgagc agggcgagcg cttccagctc 1021 gttccggcgg cggagcagga ggtaaagagc acccgtggtg gccatagtgt cacctattcg 1081 gtgtacgaca tgcatgagca gtttaaggaa gccggcgagc ggcttttcaa tgtggcctgg 1141 ctttcgccaa agagcgattc gcatcgcagg cgcaatctgg ccaagccttc gctgccccca 1201 gtgaccgttc atcggtatct ccttggaaac ggtcaggaaa ggggcagaat ttgcacggag 1261 gtaaccaatt cgcactacga tgccttgccc attttggtgc aggaggtgat accttggtat 1321 gtgcacgcct atctgcatac gctaaccatc cgccggaagc cgcagcgttt gaatgagtac 1381 gctcgccagc ggctgccctt caagctgctg cactatgcgc ctggcaagca gcgggagttg 1441 ccctcccacc tggaaattgg cttcatgctg cctggccaaa catccgcctt gatcaccatc 1501 gatgtggatt atctgctgct caagtggctg gagtatccgc cggatgcaaa tcatggccat 1561 tacattggtg cagctattgt ttcgagtcaa ctgccaatgg gcaggaacta cactgctctg 1621 ccgccggagg ggcatctgtt cgagcattcg ttcaatgcca cgcgacccag ctatgtgctc 1681 agcttgcaca cggaggcgct gattgtctcg ctgcccacgc cggatttcag catgccctac 1741 aatgtgatat gtttggcctg cacggtggtg gctttggcct tcgggcccat ccacagtgtg 1801 gccaccaaga tgatcattgt gggccgtcag gcgtcggcgc ccaagaattt cgtgaagaag 1861 atcttcaaca agattttccg acgcaacaag gcgaacagcg atgaggtggc tgcggaaggg 1921 gaatcgcctg gaatcgcgag agcagaaaga tcgactggcg gaccgtcggg tgaccagccg 1981 ctgctggagg atctcgacga ggaggaggag gagcaggact agaggagagg acacacacaa 2041 acagccgcgg gagtcgtgat aagcccccac tgattatttt ccatttaccc ctcagattcc 2101 aataaaatac tattattata cata