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LOCUS XM_017136826 2378 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_017136826 VERSION XM_017136826.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017136826.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2378 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2378 /gene="Septin4" /note="septin 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054076" CDS 357..1484 /gene="Septin4" /codon_start=1 /product="septin-2 isoform X2" /protein_id="XP_016992315.1" /db_xref="GeneID:108054076" /translation="MSKTPSFDKDRDYIGFATLPEQVHRKSVKRGFEFTLMVVGESGL GKSTLINSLFLGDLYKNRQMPNVEERIEKTTKVEKKTMDIEERGVRLRLTVVDTPGFG DAINCEDSWRVCTQYIDEQFRQYFTDESGLNRRNIQDNRVHCCLYFVPPWGHSLRQMD LDLIRRLHRKVNIVLVIGKADCLNKQEVRKLKERILQDLEDNHIQLYQFPECDSDEDD DFKQQDRELKASIPFAVVGSNTILEVAGKKVRGRQYPWGVVNVEDPEHSDFIKLRTFL ISTHMQDLKDTTQDVHYENFRAQCISQISQHALRERGKLKRDSISSTNGFDAAISETD RLLLQKDEEIRRMQDMLTQMQEKLKQTHLMEMKKNDSVIDV" misc_feature 444..1271 /gene="Septin4" /note="CDC/Septin GTPase family; Region: CDC_Septin; cd01850" /db_xref="CDD:206649" misc_feature 474..497 /gene="Septin4" /note="G1 box; other site" /db_xref="CDD:206649" misc_feature order(480..500,645..647,654..656,888..893,897..899, 1065..1070) /gene="Septin4" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206649" misc_feature 570..596 /gene="Septin4" /note="Switch I region; other site" /db_xref="CDD:206649" misc_feature 576..578 /gene="Septin4" /note="G2 box; other site" /db_xref="CDD:206649" misc_feature 645..656 /gene="Septin4" /note="G3 box; other site" /db_xref="CDD:206649" misc_feature order(651..758,759..788) /gene="Septin4" /note="Switch II region; other site" /db_xref="CDD:206649" misc_feature 888..899 /gene="Septin4" /note="G4 box; other site" /db_xref="CDD:206649" misc_feature 1065..1073 /gene="Septin4" /note="G5 box; other site" /db_xref="CDD:206649" polyA_site 2378 /gene="Septin4" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgctcgcca gttgcccagt tgcagctcca ccacaataca ataaagtgtt catcaaactc 61 ggggatttat tttttcaaac gaccaaacaa ataacaaaca aaactacaga cgctaagtaa 121 aaaacgaaag aaataactaa ataaacggcc aaagaaccaa acaatccgac aatgtggcaa 181 atttgctgat aaacacaggc ggagatacag tgaaaacccg gaaggcagaa aaagtggcga 241 ggcttgggcc aattacgttt taagtaggcg ttccgtatac acacgaaact cggcgggaag 301 gggcggcagg aattgaggag ctacaggaca caggacacac cagcagcagc aggaatatgt 361 ctaagacgcc ctcgttcgac aaggatcggg attacatagg cttcgccacc cttccagagc 421 aagtgcaccg gaagtcggtg aagcggggct tcgagttcac cctgatggtg gtgggcgagt 481 cggggctggg caagtccacc ctgatcaaca gcctcttcct gggcgatctg tacaagaacc 541 ggcagatgcc caatgtggag gagcgcatcg agaagacgac gaaggtcgag aagaagacga 601 tggacatcga ggagcggggc gtccgcctgc ggctgacggt ggtggacacc ccgggcttcg 661 gggatgccat caactgcgag gacagctggc gggtgtgcac ccagtacatc gacgagcagt 721 tccgccagta tttcaccgac gagagcggcc tgaatcggcg caacatccag gataaccggg 781 tgcactgctg cctctacttt gtcccgccct ggggccacag cctgcgacag atggacctcg 841 acttgatccg gcggctgcac cgcaaggtga acatcgtgct ggtcatcggc aaggccgact 901 gcctcaacaa gcaggaggtg cgcaagctga aggagcgcat cctgcaggac ctggaggaca 961 accacatcca gctgtaccag ttccccgagt gcgactccga cgaggacgac gacttcaagc 1021 agcaggatcg cgagctgaag gcctccatcc cgttcgccgt cgtcggcagc aataccattt 1081 tggaggtggc cggcaagaag gtgcgggggc gccagtatcc gtggggcgtg gtcaacgtgg 1141 aggatccgga gcacagcgac ttcatcaagc tgcgcacctt cttgatatcc acgcacatgc 1201 aggacctcaa ggacaccacg caggacgtgc actacgagaa cttccgggcg cagtgcatct 1261 cgcagatttc gcagcatgcg ctccgtgagc ggggaaagtt gaagcgggac tcgatcagct 1321 cgaccaacgg attcgatgcc gccatctcgg agacggacag gctgctgctg cagaaggacg 1381 aggagatacg gaggatgcag gacatgctca cccagatgca ggagaagctc aagcagaccc 1441 atctcatgga gatgaagaag aacgacagcg tgatcgacgt ctagggaacg ggctatagaa 1501 cgtgttcaat tttgcaccgc gatatttgca tctacctaat atataggacc tatatggtaa 1561 cccagagaca tcctggagca gctgcaacca aatcgacttt gttcataagc tagcacagac 1621 tttttaaaca aacccattgg attacgaaaa aaaaaaaaga ttaaaattca gacaacgact 1681 ccccgaagca caaagaaata cgaacaaaaa acaaccagaa cttcagactt cacagccttt 1741 ttcaattttg tagctaaagt aacgatttaa tggaacacac aaatatcttg agaaattagc 1801 tattgatcta tacgataacg atattatacc aaagtttagg gagtttcaaa aacttaacgc 1861 aagtaaattg ttaataacaa aagatcaaga aaccacagag gcacacagaa aaaacgttac 1921 tgagaaagac atagacagac aaaaaaggaa aattttggtt ttatttattt tcaaggattc 1981 attttgagtt ttatttgttt tttaaggagc aaaagagaaa gtttgcttta attatgtgta 2041 aagaacttat accatttgta ttgtaagaat atatcagatc gggcgatata tatatatata 2101 tatgtatgtg taggataaac ctatggaggt tttggcactg aatttccatg aatcgatttt 2161 cagcaagttc caattattta tgctaattac gtattatcag atatatctat gaacaaaacc 2221 tattttgttg aaacgaattg ttaatgaatt tattttaaat taatcgatta agccttcacg 2281 caacaaccat aatatttaaa tgaaattata gtcgaaaaat tatatataaa cctagcgatt 2341 gctaaaaatc aatttcaaat aaagataaaa acaacata