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LOCUS XM_013263596 4621 bp mRNA linear INV 02-SEP-2023 (LOC106096059), transcript variant X4, mRNA. ACCESSION XM_013263596 VERSION XM_013263596.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263596.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4621 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4621 /gene="LOC106096059" /note="FHIP family protein GG24907; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106096059" CDS 891..4103 /gene="LOC106096059" /codon_start=1 /product="FHIP family protein CG3558 isoform X2" /protein_id="XP_013119050.2" /db_xref="GeneID:106096059" /translation="MSWLRTSPLRQSLTRNPSNGSGSSSSFASGQNSALRQRPIDTAT DCDPRACYDSFCKHWQQAYDIIQKSDGPNRPPTHDDVLAVVSHLDFMVTLLLVELHHC NKISLPDVSNTPAAPCLEYLLSENLLDKLYEWGCTTGRYANAVRLEQLKLYELLVSHS RHQLLCHEPFLRPLLKILASSQGEIFPPDLEKRLVILLNQLCVVLMQNVHLLDLFFFS SAQETQSKNNFIIFSLLIPYVHREGSLGHQARDALLLCMALSQKNSNIGTYIAQYSSM CPLLVTGLGGLYSRLPNSIEINSIDWHRITPDDVTEIPELTLFMNALEFCNAVVQVAH EMIKTQLLDFMYQGFIVPVLGPALLQTNVESQISAMSYLDLILRSVTEPALMKLFVKF LLDVEKFDGERILDTLVERLKSSDSNLCMVTMALFDTILGLHCEDLMLELLLKFLLPG KHVPISYRHKINRVDPYTNAADFFLELTPDVMKRVRELTKHKHLGDTAHHTHPTMPSP TSTLSKTIGANWNYYGLHTGDSLYANYHAYLFEAHFRIVQCSNACSVWSHDYRYQKWP RKSTKATNQTLEMVKQFLNEFDNNSADQSSNSNAPLMVYDDKKQLDSLQSIGESSGYE SFKWRPADEEAPSEDIHYSSGAQHTTGQPFTMGGDMDLDTSNASGKLVIGGVATKRDF WRVSKNRNDLNLTDLDFSEDLFAQGTVSLGPFLNAIWAKLQTFTSNTLYVNLHLTGLI TRLACYPLPLIHSILLRPDIVITSDTPSFHQVLRILKQQIDAELPVVEDSLEIIDVAR SNLIDREFRLMNARKASENSPIHVAKTLQTPQSAYAHLSATSPVQVTPSSSYDPFKRN DNKRKSISKSFTSMFSRKTNATSGLSQIYAFFTGGLSGANGTTSTNGNQTQNPTQTNN AAVTRETSLTTLPPTPSVKVSSSGVTTTNSSTSSRERSIERGSSISSTSTLQSNSSAT PYHHNTPLQHNLSVTTLSSLSERVGASSNMLGGSLLSGSGVGGGQGSGPASLDSLGGI GGGTERTRDLALCAVLLDEWLKELAAIAQEQSVIMINVGY" polyA_site 4621 /gene="LOC106096059" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttctctttt cgatgttgtg tttctgtctg caatttttta attttttagc aatgcaaata 61 tagtataaac tatttaaatg ttgtctgata cataaaaaag tgttacgtga tgtggttgga 121 aggagatgtg atataaagtt aatgatcaaa tagaaaaaaa tcaaggaaaa taagactttc 181 cgtcctgcgg aagttggcta caacaacaac gtaaaatacg gtttgaatgt gtgtgagatt 241 gttattgtgt tcataaaatg ttaataaata tatagtagaa gagataaaat aaaagaaaaa 301 gtaaaattcg catacacaca caaataatac aatagcaaca aaaaatattt taattgaatc 361 cacgcaattt tgagaattat aagatttaaa attggcatca cgtcatcgta gatattggag 421 ccgctaaggg aatgctagca aactgagtaa tcatctttat agaagaacaa cgaaaagaga 481 acaaaaataa taaaataata taaataaaat acaacaaaac aataaaatag ttattagcag 541 cacataacgt cctctgcggc ctatttttca ccctcaatga aaacgttgtc ggctcatata 601 ctgtgatgat aaagcaaaat aaacaccttc acacacattt ctatgtatgt atgaccgatg 661 tccgaacaca catgcacccg cgcactctac acttgttcat gtttaataca acgcaacatt 721 cgtattagca cgcattgctt tatctatttg tggatttaac acaaattgta tttggtgttg 781 cttgccgctg ttgcagaaac aaatgttggt gccactataa ttggcggcag tagaagaaga 841 gatcgaacga aaaacaaagc acaaaaataa aaacaacagt aacgcacgct atgagttggc 901 tacgtacaag tcctttgcgg cagagcctaa cacgaaaccc aagcaatggt tccggttcga 961 gcagttcctt tgcctctgga caaaattcgg cacttcggca aagacccata gatacagcaa 1021 cagactgtga tcctagagct tgttacgata gcttttgcaa acattggcaa caagcttacg 1081 atattataca aaaatccgat ggacctaaca gaccccccac acatgatgat gtgctcgctg 1141 tggtctctca tttggatttt atggtgactt tgcttttagt cgaattgcac cattgtaata 1201 aaattagctt acctgatgtc tcaaatacac cagcagcacc atgtttggaa tatttactga 1261 gtgagaatct gctagataag ctttacgaat ggggatgcac cacgggtcgt tatgcaaatg 1321 cagtccgatt ggaacaattg aagctttatg aactcttggt gagtcattcc agacatcagc 1381 tgctgtgcca cgaaccgttt ctaaggccgc tgcttaaaat tctggcctca agtcaaggcg 1441 aaatatttcc cccagatttg gaaaaacgtt tggttatttt actcaatcaa ctatgtgtgg 1501 tcttaatgca aaatgtgcat ttgttggatt tatttttctt ctcatcggcc caggagacac 1561 aaagcaaaaa caacttcatc atattttccc ttcttatacc ctatgtacat cgcgaaggca 1621 gcttaggcca tcaagccaga gatgcgcttt tactatgcat ggctttgtca cagaaaaatt 1681 caaacatcgg cacatatata gcacaatatt cctctatgtg tccattattg gtaacaggac 1741 taggaggcct atattctcga ctaccgaact ccatagaaat caattcgata gattggcatc 1801 gcattactcc cgatgatgtt acagaaatac ccgaattgac tttattcatg aatgctttgg 1861 aattttgcaa tgccgttgtt caagtggctc atgaaatgat aaaaacccag ttgcttgatt 1921 tcatgtatca gggattcatt gtgcccgttt tgggtccagc attactgcag accaacgtcg 1981 aatctcaaat atccgctatg tcctacttgg atttaatttt gcgttcagta accgaacctg 2041 cccttatgaa attgttcgtg aaatttctct tagatgtgga aaaatttgat ggggaacgca 2101 tattggatac attagttgaa cgtctcaaat cttcagattc aaatctatgc atggttacaa 2161 tggccttgtt cgataccata ctaggattgc attgtgaaga tttaatgttg gaattattat 2221 tgaagttcct gttgccagga aagcatgtgc ccatatcata tcgtcacaaa atcaatcgag 2281 tggatcccta caccaatgca gccgatttct ttttggaact aacacctgat gtcatgaaaa 2341 gagtaagaga actaaccaaa cacaaacact tgggagacac tgcccatcat acacatccca 2401 caatgccctc gccgacatct actctaagca aaacgattgg agctaattgg aattattatg 2461 gtttacatac aggcgatagt ctatacgcca attatcatgc atatttgttt gaggcacatt 2521 ttcgcatagt gcagtgttca aatgcctgtt cggtgtggtc tcatgactat agatatcaga 2581 aatggccccg taaatcgacc aaagcaacta atcagacatt ggaaatggta aagcaattcc 2641 ttaatgaatt cgataacaat agtgcagatc aatcatcaaa ctctaatgcg cccttaatgg 2701 tctatgatga taaaaaacag ttggatagtt tacaatcgat cggagagtcg agtggttatg 2761 agtcgtttaa atggagacca gccgatgaag aagcacccag cgaagatata cattactcaa 2821 gtggggccca acataccacc ggccaaccct tcacaatggg aggtgatatg gatttggata 2881 caagcaatgc aagcggtaaa ttagtcattg gtggagtggc aacaaaacga gatttttggc 2941 gtgtttcgaa aaatcgaaat gatttaaatt taaccgattt ggatttttcg gaagatttgt 3001 ttgctcaagg gacagtctca ttgggtccct ttttaaatgc catttgggct aaactgcaaa 3061 cctttaccag caacacgctt tacgtcaatc ttcacttgac tggccttata acgcgattgg 3121 cttgttaccc attgccactg atacactcga tacttttacg tccagacatt gtcattacat 3181 ccgatacacc atcatttcac caagtcctac gcatactcaa gcaacaaatc gatgccgaat 3241 taccagttgt agaagactca ctcgaaatta ttgacgttgc tcgttcaaat cttatagatc 3301 gtgaatttcg cttgatgaat gcccgcaaag catctgaaaa ttctcccata catgtggcca 3361 aaacactaca aacaccacaa tcagcctatg cccatctgtc ggccacttcg ccagtccaag 3421 taacgccctc ctcgtcgtat gatccattta aacgtaatga caacaaaaga aaaagtatta 3481 gtaaatcttt tacgagtatg tttagccgca aaactaatgc tacatctggc ttatcacaaa 3541 tttatgcatt cttcaccggt ggtctatcgg gagctaatgg cacaacatca actaacggaa 3601 atcaaacaca aaatccaact caaaccaata atgcagccgt tacacgtgag actagtttaa 3661 caactttacc accaacgcca tctgtgaaag tatctagcag tggtgtaaca actacaaatt 3721 cctccacatc ttcaagagaa cgctcaattg aacgtggtag tagtatcagc agcaccagta 3781 cattgcaatc caatagttca gcaactccat accatcacaa tacaccgctg caacataatt 3841 tatcggtcac aactctatct tcactgagcg aaagggttgg tgcatcttca aacatgttgg 3901 gtggttcatt gctgagtggt agtggtgtag gaggaggtca aggctctgga ccggcatctt 3961 tggattcgtt aggtggaatt ggaggcggta ctgaacgtac acgtgacttg gccttatgtg 4021 ccgttctctt agatgaatgg ctgaaggaat tggctgctat agcacaagaa caaagtgtta 4081 ttatgattaa tgtaggttac tgacggcgac gaaggcatca ccatcccctt aagtatataa 4141 gtcatcaaca gtatcatcat tatcatatgt caattaattg ttttcattgt taatattgta 4201 tatacgattt ttggagcaaa gttttgcaat tgtattttct tatttttttt tacttattct 4261 acaaacagat atttagctat taagagtaaa ttaaagaaaa ggcaaccttt ggtatatctt 4321 tttcaaaaag attttaataa tatttcttgt atacaattct gtccacatgt tgcaaaaatg 4381 tttttgtaga aaaaaaaaaa ttgtgtcact tttgaatatg atggtattcc agtaaactct 4441 tccatggtca tttcctatat atactttata aaattcttaa acgatctggc cttgatttta 4501 attatgcttt gtattggata tgtgttttca tgagcttaca aaaagcttat tttctaataa 4561 attccacttg gctgtaactg tcagatagac ccatagatct taagattaag atttcgctga 4621 a