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LOCUS XM_013263593 4495 bp mRNA linear INV 02-SEP-2023 (LOC106096059), transcript variant X3, mRNA. ACCESSION XM_013263593 VERSION XM_013263593.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263593.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4495 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4495 /gene="LOC106096059" /note="FHIP family protein GG24907; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106096059" CDS 741..3977 /gene="LOC106096059" /codon_start=1 /product="FHIP family protein GG24907 isoform X1" /protein_id="XP_013119047.2" /db_xref="GeneID:106096059" /translation="MSWLRTSPLRQSLTRNPSNGSGSSSSFASGQNSALRQRPIDTAT DCDPRACYDSFCKHWQQAYDIIQKSDGPNRPPTHDDVLAVVSHLDFMVTLLLVELHHC NKISLPDVSNTPAAPCLEYLLSENLLDKLYEWGCTTGRYANAVRLEQLKLYELLVSHS RHQLLCHEPFLRPLLKILASSQGEIFPPDLEKRLVILLNQLCVVLMQNVHLLDLFFFS SAQETQSKNNFIIFSLLIPYVHREGSLGHQARDALLLCMALSQKNSNIGTYIAQYSSM CPLLVTGLGGLYSRLPNSIEINSIDWHRITPDDVTEIPELTLFMNALEFCNAVVQVAH EMIKTQLLDFMYQGFIVPVLGPALLQTLKGKHFQTNVESQISAMSYLDLILRSVTEPA LMKLFVKFLLDVEKFDGERILDTLVERLKSSDSNLCMVTMALFDTILGLHCEDLMLEL LLKFLLPGKHVPISYRHKINRVDPYTNAADFFLELTPDVMKRVRELTKHKHLGDTAHH THPTMPSPTSTLSKTIGANWNYYGLHTGDSLYANYHAYLFEAHFRIVQCSNACSVWSH DYRYQKWPRKSTKATNQTLEMVKQFLNEFDNNSADQSSNSNAPLMVYDDKKQLDSLQS IGESSGYESFKWRPADEEAPSEDIHYSSGAQHTTGQPFTMGGDMDLDTSNASGKLVIG GVATKRDFWRVSKNRNDLNLTDLDFSEDLFAQGTVSLGPFLNAIWAKLQTFTSNTLYV NLHLTGLITRLACYPLPLIHSILLRPDIVITSDTPSFHQVLRILKQQIDAELPVVEDS LEIIDVARSNLIDREFRLMNARKASENSPIHVAKTLQTPQSAYAHLSATSPVQVTPSS SYDPFKRNDNKRKSISKSFTSMFSRKTNATSGLSQIYAFFTGGLSGANGTTSTNGNQT QNPTQTNNAAVTRETSLTTLPPTPSVKVSSSGVTTTNSSTSSRERSIERGSSISSTST LQSNSSATPYHHNTPLQHNLSVTTLSSLSERVGASSNMLGGSLLSGSGVGGGQGSGPA SLDSLGGIGGGTERTRDLALCAVLLDEWLKELAAIAQEQSVIMINVGY" polyA_site 4495 /gene="LOC106096059" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttctctttt cgatgttgtg tttctgtctg caatttttta attttttagc aatgcaaata 61 tagtataaac tatttaaatg ttgtctgata cataaaaaag tgttacgtga tgtggttgga 121 aggagatgtg atataaagtt aatgatcaaa tagaaaaaaa tcaaggaaaa taagactttc 181 cgtcctgcgg aagttggcta caacaacaac gtaaaatacg gtttgaatat aagatttaaa 241 attggcatca cgtcatcgta gatattggag ccgctaaggg aatgctagca aactgagtaa 301 tcatctttat agaagaacaa cgaaaagaga acaaaaataa taaaataata taaataaaat 361 acaacaaaac aataaaatag ttattagcag cacataacgt cctctgcggc ctatttttca 421 ccctcaatga aaacgttgtc ggctcatata ctgtgatgat aaagcaaaat aaacaccttc 481 acacacattt ctatgtatgt atgaccgatg tccgaacaca catgcacccg cgcactctac 541 acttgttcat gtttaataca acgcaacatt cgtattagca cgcattgctt tatctatttg 601 tggatttaac acaaattgta tttggtgttg cttgccgctg ttgcagaaac aaatgttggt 661 gccactataa ttggcggcag tagaagaaga gatcgaacga aaaacaaagc acaaaaataa 721 aaacaacagt aacgcacgct atgagttggc tacgtacaag tcctttgcgg cagagcctaa 781 cacgaaaccc aagcaatggt tccggttcga gcagttcctt tgcctctgga caaaattcgg 841 cacttcggca aagacccata gatacagcaa cagactgtga tcctagagct tgttacgata 901 gcttttgcaa acattggcaa caagcttacg atattataca aaaatccgat ggacctaaca 961 gaccccccac acatgatgat gtgctcgctg tggtctctca tttggatttt atggtgactt 1021 tgcttttagt cgaattgcac cattgtaata aaattagctt acctgatgtc tcaaatacac 1081 cagcagcacc atgtttggaa tatttactga gtgagaatct gctagataag ctttacgaat 1141 ggggatgcac cacgggtcgt tatgcaaatg cagtccgatt ggaacaattg aagctttatg 1201 aactcttggt gagtcattcc agacatcagc tgctgtgcca cgaaccgttt ctaaggccgc 1261 tgcttaaaat tctggcctca agtcaaggcg aaatatttcc cccagatttg gaaaaacgtt 1321 tggttatttt actcaatcaa ctatgtgtgg tcttaatgca aaatgtgcat ttgttggatt 1381 tatttttctt ctcatcggcc caggagacac aaagcaaaaa caacttcatc atattttccc 1441 ttcttatacc ctatgtacat cgcgaaggca gcttaggcca tcaagccaga gatgcgcttt 1501 tactatgcat ggctttgtca cagaaaaatt caaacatcgg cacatatata gcacaatatt 1561 cctctatgtg tccattattg gtaacaggac taggaggcct atattctcga ctaccgaact 1621 ccatagaaat caattcgata gattggcatc gcattactcc cgatgatgtt acagaaatac 1681 ccgaattgac tttattcatg aatgctttgg aattttgcaa tgccgttgtt caagtggctc 1741 atgaaatgat aaaaacccag ttgcttgatt tcatgtatca gggattcatt gtgcccgttt 1801 tgggtccagc attactgcag acactaaaag gcaaacattt ccagaccaac gtcgaatctc 1861 aaatatccgc tatgtcctac ttggatttaa ttttgcgttc agtaaccgaa cctgccctta 1921 tgaaattgtt cgtgaaattt ctcttagatg tggaaaaatt tgatggggaa cgcatattgg 1981 atacattagt tgaacgtctc aaatcttcag attcaaatct atgcatggtt acaatggcct 2041 tgttcgatac catactagga ttgcattgtg aagatttaat gttggaatta ttattgaagt 2101 tcctgttgcc aggaaagcat gtgcccatat catatcgtca caaaatcaat cgagtggatc 2161 cctacaccaa tgcagccgat ttctttttgg aactaacacc tgatgtcatg aaaagagtaa 2221 gagaactaac caaacacaaa cacttgggag acactgccca tcatacacat cccacaatgc 2281 cctcgccgac atctactcta agcaaaacga ttggagctaa ttggaattat tatggtttac 2341 atacaggcga tagtctatac gccaattatc atgcatattt gtttgaggca cattttcgca 2401 tagtgcagtg ttcaaatgcc tgttcggtgt ggtctcatga ctatagatat cagaaatggc 2461 cccgtaaatc gaccaaagca actaatcaga cattggaaat ggtaaagcaa ttccttaatg 2521 aattcgataa caatagtgca gatcaatcat caaactctaa tgcgccctta atggtctatg 2581 atgataaaaa acagttggat agtttacaat cgatcggaga gtcgagtggt tatgagtcgt 2641 ttaaatggag accagccgat gaagaagcac ccagcgaaga tatacattac tcaagtgggg 2701 cccaacatac caccggccaa cccttcacaa tgggaggtga tatggatttg gatacaagca 2761 atgcaagcgg taaattagtc attggtggag tggcaacaaa acgagatttt tggcgtgttt 2821 cgaaaaatcg aaatgattta aatttaaccg atttggattt ttcggaagat ttgtttgctc 2881 aagggacagt ctcattgggt ccctttttaa atgccatttg ggctaaactg caaaccttta 2941 ccagcaacac gctttacgtc aatcttcact tgactggcct tataacgcga ttggcttgtt 3001 acccattgcc actgatacac tcgatacttt tacgtccaga cattgtcatt acatccgata 3061 caccatcatt tcaccaagtc ctacgcatac tcaagcaaca aatcgatgcc gaattaccag 3121 ttgtagaaga ctcactcgaa attattgacg ttgctcgttc aaatcttata gatcgtgaat 3181 ttcgcttgat gaatgcccgc aaagcatctg aaaattctcc catacatgtg gccaaaacac 3241 tacaaacacc acaatcagcc tatgcccatc tgtcggccac ttcgccagtc caagtaacgc 3301 cctcctcgtc gtatgatcca tttaaacgta atgacaacaa aagaaaaagt attagtaaat 3361 cttttacgag tatgtttagc cgcaaaacta atgctacatc tggcttatca caaatttatg 3421 cattcttcac cggtggtcta tcgggagcta atggcacaac atcaactaac ggaaatcaaa 3481 cacaaaatcc aactcaaacc aataatgcag ccgttacacg tgagactagt ttaacaactt 3541 taccaccaac gccatctgtg aaagtatcta gcagtggtgt aacaactaca aattcctcca 3601 catcttcaag agaacgctca attgaacgtg gtagtagtat cagcagcacc agtacattgc 3661 aatccaatag ttcagcaact ccataccatc acaatacacc gctgcaacat aatttatcgg 3721 tcacaactct atcttcactg agcgaaaggg ttggtgcatc ttcaaacatg ttgggtggtt 3781 cattgctgag tggtagtggt gtaggaggag gtcaaggctc tggaccggca tctttggatt 3841 cgttaggtgg aattggaggc ggtactgaac gtacacgtga cttggcctta tgtgccgttc 3901 tcttagatga atggctgaag gaattggctg ctatagcaca agaacaaagt gttattatga 3961 ttaatgtagg ttactgacgg cgacgaaggc atcaccatcc ccttaagtat ataagtcatc 4021 aacagtatca tcattatcat atgtcaatta attgttttca ttgttaatat tgtatatacg 4081 atttttggag caaagttttg caattgtatt ttcttatttt tttttactta ttctacaaac 4141 agatatttag ctattaagag taaattaaag aaaaggcaac ctttggtata tctttttcaa 4201 aaagatttta ataatatttc ttgtatacaa ttctgtccac atgttgcaaa aatgtttttg 4261 tagaaaaaaa aaaattgtgt cacttttgaa tatgatggta ttccagtaaa ctcttccatg 4321 gtcatttcct atatatactt tataaaattc ttaaacgatc tggccttgat tttaattatg 4381 ctttgtattg gatatgtgtt ttcatgagct tacaaaaagc ttattttcta ataaattcca 4441 cttggctgta actgtcagat agacccatag atcttaagat taagatttcg ctgaa