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LOCUS XM_013263591 5733 bp mRNA linear INV 02-SEP-2023 variant X2, mRNA. ACCESSION XM_013263591 VERSION XM_013263591.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263591.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5733 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5733 /gene="LOC106096057" /note="mucin-5AC; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106096057" CDS 1918..4929 /gene="LOC106096057" /codon_start=1 /product="mucin-5AC" /protein_id="XP_013119045.2" /db_xref="GeneID:106096057" /translation="MYISNSSNIGMATLLQNNKNCMKTLTNGGATTGGNHIIVGNVVT SGVGSGSSSNNTTTLSSQVVGTIVSSGSNAANTTTTLVGANVGGGSGAGGPVTTLGGN VVIPAQTQTILLTNGATGASTIITYQQYQQLLQQQQQQQQQRLLVSQNLVNVPIGNIV STSNGGLAVITDSSNANNNNNQTSTSSSLSTTHQGTFLVTNSSTGVSQFQQHINANGV SVSGGNNNGSVVTSSAYLQPTQQQQARLITTNSGGGGGQTATIRHFSQFSQQQPATIV NNITNSNQSQPQRTTVLINRNNNTIIAGNATQRLQHATILTTTGAKTPTLIKTQQVLN AAGKGQIINVVKSPSAVAVAAAANANINAKNILTKPRTAITANLPQQQRFGTVTTANI QQLRPQQQQQLKIVKTQNIPQRATILNNIIPSSSTSSSTTTSSATATTLLNNSNLTKN HHFLNKTQITAASLSSATKTVVVSSPASLSLTSLPFSSSSSTSLSLKTTTVNANISSS APSSSSAAAAASTLTYTQQTAPLNQMNGHLINNFNKNPNKNTTTNLQQPASKLVPNGH IIHVTSNNHNTTSNYASTAAVSSSFAASTTTTPVVNSLSLSSYAATPFSSLSSSKSST TSTTTTTNLSVVAPNSNAAGTQNSNTPSLASISKSDTSIAAYTTTSPNNSVANNSSTE GVAPDSNATAVAAPEPEAEPEIDIVINNVVCSFSVRCHLNLREIALNGANVEYRRENG MVTMKLRRPYTTASIWSSGRITCTGATSEEQAKIAARRYARTLEKLGFRARFHNFRVV NVLGTCSMPWAIKIVNFSEKYREEASYEPELHPGVTYKLRYPKATLKIFSTGSITVTA ASVAHVQNAIEHIFPLVYEFRKKRSPEELEQLRLKQLQNATFEDIIEADETLGGSSAS GDFANSSKSLQRRRISNSFTKFPNAKRKRTQFTGGVVDVDDEEFDADDPDNTIIDGTG GGGGGDDDDDIVMYDPNESIIAGPEDEDDDL" polyA_site 5733 /gene="LOC106096057" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttatataca ctgagagaga aaaagaggca catcaaaaga gagagagaga ttaaaaagaa 61 atattaaatc tttgcaacat ttcgaaatgc aattaacaaa ataataaatg attttaaacg 121 aaacacgtct attatgcaaa ttatgaatta ttattttctt caattctatt ttcatttgac 181 gaaatgaaat tacacacact acaatttact acagagagag cacacacacg catagtaggg 241 atcagagtta agcaataaaa aaattttttc ttaataattt caagtgttta ataaaatatt 301 aaattattct taaacaattt cgtttttttt tgtttgtaaa accgtatgga agaaatttat 361 tcaatggcaa agcaaaggag aaaaatcact taatttttta tatttcgaac ggatgaataa 421 taataataaa aagaagaagc agcattagtt aaatagcaag acatttcgtt cggtcggttt 481 ttttcgaatc gcgtatattt gctgtctgtg gtgttgtgct tgcttttgtg tcttcgcacg 541 gtcgcgtaac gccgctgagg caaaaattca actgtctaac aaagtaaacg ctcgtttctt 601 cgttgctcgt taatgtgata gagtatttac tctcgtatga aacggtaaaa acaagaacaa 661 cacagccgat ttgtcagacg caagtgtgtg tgcgcgtgtg tcaatgtgcg ttgtgtgtgt 721 gtgaattata aagaacgaaa acttgccgag accgccagta ataaagagca atatagataa 781 gagagagaga gggagaggaa atgagtgcaa aagtagcaca atgttgagag agtgagaacg 841 gagaaattta aacactgaaa aaagaattaa ttttattttt tacttatcat ggtgcaactc 901 tctactctct ctccctgtcg ccctgcaaag agctaaaatt atgatttaac aaatgtactg 961 ttatttttgc gtttattttt ataattagca acaacataaa gaaataccta tttaaaaaag 1021 attaagattg ttttaattta ctaactaatg aagcctaaat aaaaacttcg aattgaaata 1081 caaacaagaa caaggcgttg gacttcattt aaaaaccttg aggaaattgt actctaaacg 1141 agactggcgg agattgcaag tgctaatatt atacctaacc agcattaaaa gaattttgcg 1201 ccagtttttt ttttgaaatt ttactttatt taaaaggaat tataagagac tgtttctaaa 1261 gaacaaatac taaataaaaa gcaaacaaaa aacatctaaa ccaaaaccta aggagaaaga 1321 aacgaaagac ttgaactaca caaataggca acaacaaaaa caaaaatcca aaaattacta 1381 caacaaacca gcagtagcag cgtcaacaac aaaactatat taaatgtttc taaaacaaca 1441 aatgaatatc aaaaaaatat tttcttgatt ttacaagaat agagagtagt ggtgtgccaa 1501 gagacagagt ttgagagaca caaaggaagt tagaaaaagg ataagaaagt accaaaatat 1561 tctctgaaag agagaccagg ccacaaagat ttgtgacctt acgagacaca tttatgaaag 1621 gtcggtccat caaacagaca gcaaaagcaa atcaaacgga atttgacatt tcatttatca 1681 tcaaacaaca aaaaagcata tcacatctgc cagagaatat tctagccaaa acccacaaac 1741 gatagagagt aagacgagct tcatcagaag gggaggaaca acaatctacg tagttttcct 1801 cctcctctgg ccacggctgt tttccatatg aagtgaatca tttctttctt ctgatctgat 1861 aatattgggg gaaaaagaaa tcaaaaaagc ggaaaaggcc aatattaaga gcaacaaatg 1921 tatattagca atagcagcaa cattggtatg gccacgttgt tgcaaaacaa taagaattgc 1981 atgaaaactt tgacaaatgg cggagctaca actggtggca atcacatcat cgttggcaat 2041 gttgtaacca gtggcgttgg cagcggtagc agcagcaaca atactaccac actttcaagc 2101 caggtggtgg gcactatagt gagttcggga tcaaatgcag ctaacacaac tactacgcta 2161 gttggggcaa atgtaggcgg tggcagtggt gcagggggtc ctgtcaccac attgggtggt 2221 aacgtagtta taccggccca aacgcaaacc atattgttga caaatggagc aacgggcgcc 2281 tcgaccatta tcacctacca gcaatatcag cagctgttgc agcagcagca acaacaacag 2341 cagcaacgtt tattggtttc acaaaactta gttaatgtac ctataggcaa tatagtaagt 2401 accagcaatg gcggattggc agttattacc gattcgtcta atgccaacaa caacaacaac 2461 cagacaagca cttcctcgtc gttgtcgacg acacatcaag gaactttctt ggttaccaac 2521 tcctcaacgg gtgtgtcaca attccagcaa catattaatg ccaatggtgt atctgtgtca 2581 ggaggtaata acaatggctc tgtggtaacc tccagcgcct acttgcagcc tactcagcag 2641 caacaagcac gattgattac taccaactct ggtggcggtg gtggtcaaac tgcaacgata 2701 cgtcatttct cgcaattttc ccagcaacag cctgccacca ttgtaaacaa tatcaccaac 2761 agtaatcagt cccagcccca acgcactacg gttttgataa atcgcaacaa caacacgatt 2821 attgctggta atgcaacaca acgtttacaa catgccacca tattaacaac aacgggagcg 2881 aaaacaccaa cactaatcaa aacgcaacag gtgctgaatg ctgccggcaa aggtcaaatc 2941 ataaatgttg ttaaaagccc ctccgctgta gctgttgccg ccgccgccaa cgctaatatc 3001 aatgccaaga atattcttac aaagcccaga acagcgataa ctgccaactt gccccaacaa 3061 cagcgttttg gtaccgtcac caccgccaac attcagcaat tgagaccaca gcaacagcaa 3121 caattgaaaa ttgtgaaaac tcaaaacata ccacaacgtg ccactatatt aaataatata 3181 ataccgtcgt cgtctacgtc gtcgtcgaca actacatctt ctgctacagc aacaacactc 3241 ctgaataaca gcaatttaac caaaaatcat cattttttaa ataaaactca aataacggct 3301 gcgtcgttgt cttcagcaac taaaaccgtt gtagtatctt cgccagcttc cttatcatta 3361 acttcattac cattttcgtc gtcatcatcg acatctttgt cattgaagac aaccacagtt 3421 aatgctaaca tctcatcatc cgccccatcg tcatcatccg ccgccgccgc cgcttccacc 3481 ttaacttata cgcaacaaac tgcaccactg aatcaaatga atggacattt gataaataat 3541 tttaataaga atccaaataa aaacacaaca acaaatttgc aacaacccgc ctctaaatta 3601 gttcctaatg gccatataat ccatgttaca tcaaataacc acaacaccac cagtaactat 3661 gcatcaacag ctgcagtatc ctcatcattt gcagcctcca ccacaactac tccagtagtg 3721 aattctctta gtttgtcctc ttatgctgca acgccattct cttcattgtc gtcatccaag 3781 tctagtacaa catccactac taccaccaca aatctatcag tggtagctcc caactccaat 3841 gccgcaggaa cacaaaacag caatacccca tcattagctt caataagtaa aagtgatact 3901 tcgattgctg cctacacaac aacgtcaccc aacaatagtg tagcaaataa tagcagtaca 3961 gaaggtgttg ccccagattc gaatgcaaca gcagtagctg ccccggaacc ggaagctgaa 4021 cccgaaattg atattgtcat taacaatgtt gtatgttcct tcagtgttcg ttgtcattta 4081 aatttgcgtg aaattgcttt gaatggtgca aatgtagaat atcgacgaga aaatggcatg 4141 gtaacaatga aattacgtcg tccttataca acagcctcta tttggtcctc gggtagaata 4201 acatgcactg gagccacttc tgaggaacag gcaaaaatag cagcacgtcg ttatgctcgt 4261 actttggaga aattgggttt tcgagctcgt tttcataatt tccgcgtggt taatgttttg 4321 ggcacttgca gcatgccttg ggccataaaa atagtaaatt tttccgaaaa atatcgggaa 4381 gaggcaagct atgaacctga attacatcct ggcgtaacat acaagctccg ttatcccaaa 4441 gccacattaa aaatattctc tacgggcagt ataacagtta ctgctgctag tgttgcacat 4501 gttcaaaacg ccattgaaca tatattcccg cttgtctatg agttccgcaa gaaacgttcc 4561 cccgaagagt tggaacagct tcgtctgaaa caactacaaa atgcaacatt tgaagatatt 4621 attgaagctg atgagacatt aggcgggtca agtgcgagtg gagattttgc aaattcttca 4681 aaatctctgc aacgccgacg tatttcgaat tcattcacta aatttcccaa tgccaaaaga 4741 aaacgtaccc aattcactgg tggagttgtt gatgttgacg atgaggaatt tgatgctgat 4801 gatcctgata atacaataat agatggtact ggtggtggtg gtggcggtga tgatgacgac 4861 gatattgtta tgtatgatcc caacgaatca attatagctg gtcctgaaga tgaagacgat 4921 gatttgtaag aatatattga atatatatac atatatataa aagtatactt cgtatataat 4981 atacatacat acatatatac ataccaatat gtattgcata ctaagaagaa tcactcatat 5041 agattcacaa cccatcgccc cacacccccc agatggaatt tattttgggg agggggcgtg 5101 gtgcaaatgt tcgtttttaa aagcatatct ttaataaagc ctagaaaaca aaccaagcaa 5161 acaaccaaac aaacaaacca catatatgcc gattatgagt tagaagaacc aaatgacaat 5221 ttatatcatt tgttaaggcg gagaagaatc atcgatatgt caactccacc acaatcaaca 5281 cgaccatcat cattcagctt ctccaaatgt atcacatcat gtatcaaagc atctgtaacg 5341 catctataca atatttgaag caacaaataa atcaaatcga ctttttatta tatataatta 5401 ataatctagt gaaatttaga gccaaaaatt taatgcaaat gcaaactttt aattttaagg 5461 tttcaccata caaaaaatct tgttaaatct caaataaacc cgatgtcatg cctcaataat 5521 cgataaaagt atcaaaatat gcaactgttt tcaagaattg tgtatggatg tttgggatat 5581 gcacatttat gaatacgctt gtaaatcacc aaaaaaacgc aatgtaaacg gaaaggattt 5641 atttttcaat ttagttaaat ccagatcata aaaatttcac tataaacgtg ctataagtac 5701 aaattggatc atgacttacg acccgtgatc gta