Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013263582 2773 bp mRNA linear INV 02-SEP-2023 (LOC106096056), transcript variant X2, mRNA. ACCESSION XM_013263582 VERSION XM_013263582.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263582.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2773 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2773 /gene="LOC106096056" /note="armadillo segment polarity protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins" /db_xref="GeneID:106096056" CDS 49..2520 /gene="LOC106096056" /codon_start=1 /product="armadillo segment polarity protein isoform X1" /protein_id="XP_013119036.1" /db_xref="GeneID:106096056" /translation="MSFMQTQNRTMSHNNQYNPPELPPMVSSKEQTLMWQQNSYLVDS GIHSGAVTQAPSLSGKEDEEMEGDPLMFDLDTGFPQNFTQDQVDDMNQQLSQTRSQRV RAAMFPETLEEGIEIPSTQFDPQQPTAVQRLAEPSQMLKHAVVNLINYQDDAELATRA IPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRAISNSNDLES TKAAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDG SKMAVRLAGGLQKMVTLLQRNNVKFLAIVTDCLQILAYGNQESKLIILASGGPNELVR IMRSYDYEKLLWTTSRVLKVLSVCSSNKPAIVDAGGMQALAMHLSNPSPRLVQNCLWT LRNLSDAATKVDGLEGLLQSLVQVLASTDVNVVTCAAGILSNLTCNNQRNKATVCQVG GVDALVRTIINAGDREEITEPAVCALRHLTTRHADSEMAQNAVRLNYGLSVIVKLLHP PSRWPLIKAAIGLVRNLALCPANAAPLREHGAIHHLVRLLMRAFQDTERQRSSVATTG SQQPSAYADGVRMEEIVEGTVGALHILARESHNRALIRQQSVIPIFVRLLFNEIENIQ RVAAGVLCELAADKEGAEIIEQEGATGPLTDLLHSRNEGVATYAAAVLFRMSEDKPQD YKKRLSIELTNSLLREDNNIWGNADLGLGPDLQDMLGPEQAYEGLYGQGPPSVHSSHG GRAFQQAGYDTLPIDSMQGLEISSPVGGGGGGGAPPSAAPTSPYSMDMDVGEIDAGAL NFDLDAMPTPPNDNNNLAAWYDTDC" misc_feature 301..525 /gene="LOC106096056" /note="alpha-catenin binding domain found in Drosophila melanogaster armadillo segment polarity protein (dArm) and similar proteins; Region: CTNNAbd_dArm; cd21726" /db_xref="CDD:439243" misc_feature order(319..330,340..345,349..357,364..369,376..378, 430..438,442..447,454..459,466..468,475..501) /gene="LOC106096056" /note="putative CNTTA binding site [polypeptide binding]; other site" /db_xref="CDD:439243" misc_feature <496..>990 /gene="LOC106096056" /note="Adaptin N terminal region; Region: Adaptin_N; pfam01602" /db_xref="CDD:396262" misc_feature 529..606 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature 625..741 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature 760..858 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature order(829..831,841..843,853..855,955..957,967..969, 979..981,1084..1086,1096..1098,1108..1110) /gene="LOC106096056" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:293788" misc_feature 880..990 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature 1006..1113 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature 1129..1242 /gene="LOC106096056" /note="Armadillo/beta-catenin-like repeat; Region: Arm; pfam00514" /db_xref="CDD:425727" misc_feature 1132..1239 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature 1276..1353 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature order(1324..1326,1336..1338,1348..1350,1456..1458, 1468..1470,1480..1482,1594..1596,1606..1608,1618..1620) /gene="LOC106096056" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:293788" misc_feature 1363..1491 /gene="LOC106096056" /note="Armadillo/beta-catenin-like repeat; Region: Arm; pfam00514" /db_xref="CDD:425727" misc_feature 1375..1491 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature 1516..1623 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature order(1798..1800,1810..1812,1822..1824,1921..1923, 1933..1935,1945..1947,2044..2046,2056..2058,2068..2070) /gene="LOC106096056" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:293788" misc_feature 1837..1956 /gene="LOC106096056" /note="Armadillo/beta-catenin-like repeat; Region: Arm; pfam00514" /db_xref="CDD:425727" misc_feature 1846..1956 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" misc_feature 1969..2073 /gene="LOC106096056" /note="armadillo repeat [structural motif]; Region: armadillo repeat" /db_xref="CDD:293788" polyA_site 2773 /gene="LOC106096056" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaaaataatc aaatataagg tgtggtgtac aacgcctaaa tcaccaaaat gagtttcatg 61 caaacacaaa atcgtacaat gtctcacaac aatcagtaca atccgccgga gttgcctcca 121 atggtttcgt caaaggaaca aaccttgatg tggcaacaaa attcttatct agtggattct 181 ggtatccatt cgggagctgt aacccaagcc ccctcattgt ccggcaaaga agatgaagaa 241 atggagggtg atccattgat gttcgatttg gacacgggtt ttccacagaa ttttacccaa 301 gatcaggtgg atgatatgaa tcagcagcta agccagacac gttcgcaacg tgtacgtgcc 361 gccatgtttc ctgaaacatt ggaggagggc atagaaatac catcaacaca atttgatcca 421 caacaaccga ccgctgtgca acgtttggct gaaccatcgc aaatgttaaa acatgctgtt 481 gtcaatttaa tcaattatca agacgatgct gagttggcca ctcgtgccat accagaattg 541 atcaaattgc ttaacgatga agatcaagta gttgtctccc aagcagccat gatggtacac 601 caattgtcga agaaagaagc ttcccgtcat gccattatga acagtcccca aatggtggca 661 gctcttgtgc gtgccatttc gaatagtaac gatttggaaa gtactaaagc tgccgttggt 721 actcttcata atttgtcaca tcatcggcaa ggtctcttgg ctatattcaa gagcggtggt 781 ataccagctt tggtgaaact gttatcttct cctgttgaga gtgttctctt ctatgctata 841 accactttgc ataacttgtt attacatcaa gatggttcaa aaatggccgt acgtttagct 901 ggcggccttc agaagatggt cactttgttg caacgcaata atgtcaaatt tctagccatt 961 gtcacagatt gtctacaaat attggcctat ggcaatcaag aaagcaaatt aattatattg 1021 gcttccggtg gtcccaatga attggtgcgc attatgcgtt cctacgatta cgagaagttg 1081 ttgtggacca catcgcgcgt cttgaaagtg ttgtctgttt gttccagcaa taagccagct 1141 attgtcgatg ccggcggtat gcaggcattg gccatgcatt tatccaatcc ctcgccgcgt 1201 ttagtccaaa actgtctatg gactctgcga aatttgtctg atgccgccac caaggttgat 1261 ggccttgagg ggcttttgca atcgttggtt caagttttag cttctacaga tgtcaatgta 1321 gtcacttgcg ccgccggtat actctcgaat ttgacttgca acaatcaacg caataaggct 1381 acagtttgcc aagtaggagg cgttgatgcc ctggtacgta ccattatcaa tgcgggcgat 1441 cgtgaagaaa tcaccgaacc agctgtctgc gctttgcgcc atttgaccac acgtcatgcc 1501 gactcggaaa tggctcaaaa tgctgttcgt ttgaattatg gtttgtcggt gattgtaaaa 1561 cttttgcatc caccatcccg ttggcctttg atcaaggcag ccattgggct agtacgtaat 1621 ctggctttgt gtccggccaa tgcggcaccg ttaagggagc atggagctat acatcacttg 1681 gttcgactct tgatgcgtgc tttccaagac acagaacgtc aacgttcttc tgttgccaca 1741 acaggctccc aacaaccttc ggcatacgct gatggtgtcc gtatggagga aattgttgaa 1801 ggcacagttg gcgccttgca tattctggcc agagagtcac ataatcgtgc attgatacgc 1861 caacaatcgg taataccgat atttgttcgt ttactcttca atgagataga aaatatacag 1921 cgtgtggctg ctggcgttct ttgtgaactg gcagctgaca aagaaggcgc tgaaataatc 1981 gaacaagaag gtgccactgg gcccttaaca gatttattac actcacgcaa cgagggtgtt 2041 gccacctatg ctgcagccgt attattccgc atgagcgaag acaaaccgca agattacaag 2101 aagcgtctat ccatagagtt aacgaattcg ctattacgcg aagataataa tatatgggga 2161 aatgcagact taggcttggg tccagattta caggatatgc ttggcccaga gcaagcatat 2221 gaaggtctct atggtcaggg accacctagc gttcatagct ctcatggcgg tcgtgcattc 2281 caacaagcag gatatgatac tttaccaata gactctatgc agggtcttga aatcagcagt 2341 cccgtaggag gcggtggcgg tggtggtgcc ccacccagcg ctgcaccaac ttcaccatac 2401 tccatggata tggatgttgg tgaaattgat gctggcgcct tgaatttcga cttggatgct 2461 atgcccacac cacccaatga caacaacaac ttggctgctt ggtacgatac tgattgttaa 2521 gaacaagaag gaggagtagg aggaggaagg caacaaacac agtggattat ttttaaacaa 2581 aaaataagca gttaatgaac ttatgagagg agtatggaaa acgaaaatta aaaggatatg 2641 cattttttgt cttaatagtc ttataaagga aaatcaaaat gtgtgtgtgc tgggggtgtg 2701 tacattgaca ggaaaatgta cacattgttc acccaaaatt caccaagcca ctctacacta 2761 caccacacca cac