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PREDICTED: Stomoxys calcitrans NADH dehydrogenase (ubiquinone)


LOCUS       XM_013263511            1225 bp    mRNA    linear   INV 02-SEP-2023
            complex I, assembly factor 6 homolog (LOC106096009), mRNA.
ACCESSION   XM_013263511
VERSION     XM_013263511.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013263511.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1225
                     /gene="LOC106096009"
                     /note="NADH dehydrogenase (ubiquinone) complex I, assembly
                     factor 6 homolog; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:106096009"
     CDS             68..1027
                     /gene="LOC106096009"
                     /codon_start=1
                     /product="NADH dehydrogenase (ubiquinone) complex I,
                     assembly factor 6 homolog"
                     /protein_id="XP_013118965.2"
                     /db_xref="GeneID:106096009"
                     /translation="MKTILPRQQTISLRNLQNILQQQQRQKHSNESTTKKEVSAVKYC
                     MNLVEKNDHENYLCTLLLDNAHRRHAFALRAFNVEVAKCSSNVSEDHIAKMRLKFWYD
                     SIEKCYGKEKSYVADQPVLRELKSTIDTYQLNKVYLKRLVNARDRAPNEPFITIKDME
                     TYGEQTYSSLLYLLIQLTGVKDMNVDHAASHLGKAQGIVTLLRAIPYTKRSQALNIPQ
                     EVLIKNGVSQERVLRATANDKGVEDCIFEVATAAHQHLEMARDLTDKVPKLVRKLFLP
                     AVAVERYLERLRQANFSLTHQSCLQRDSMLPFSLYLKNLRGKF"
     polyA_site      1225
                     /gene="LOC106096009"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cagctgatat ttgttgttcc accaaaagta aacaaaccat tttaattcat tcgcaacaga
       61 gggaaatatg aagacaattt tacccagaca gcaaacaatt tctttaagaa atttacaaaa
      121 tattttacaa caacaacaga ggcaaaaaca tagcaatgaa agtacaacaa aaaaggaagt
      181 atctgccgta aaatattgca tgaatttagt ggaaaaaaat gatcatgaaa actatctatg
      241 cactttacta ttggacaatg cacatcgtag acatgccttt gctttgaggg cattcaatgt
      301 tgaggtggca aaatgttcat caaacgtttc cgaggaccat atagcaaaaa tgcgtttaaa
      361 gttttggtat gattccattg aaaagtgtta tggcaaggaa aagtcgtatg ttgctgatca
      421 accggtgctg agggagttga aaagtaccat cgatacctat cagctcaaca aagtctatct
      481 gaaacgtcta gtcaatgctc gtgatcgtgc gccaaatgaa cccttcataa ccataaaaga
      541 catggaaaca tatggtgaac aaacctattc ctccttattg taccttctaa tacaattgac
      601 tggtgtcaaa gacatgaatg tggatcatgc tgcctcccat ctgggcaagg ctcaaggcat
      661 tgtcacatta ctgcgtgcaa taccttacac caaacgtagc caagctttaa atataccaca
      721 agaggtttta attaagaatg gtgttagtca agagcgagtg ctaagggcca cagcaaatga
      781 taaaggtgtg gaagactgca tatttgaagt ggctacggcg gcacatcaac atttagaaat
      841 ggcccgtgat cttaccgata aagtacccaa actagtaaga aaactcttcc tgcctgccgt
      901 agctgttgaa cgttatttgg aacgcttaag acaagccaat ttcagtctta cacatcagtc
      961 atgcctccaa cgtgattcca tgttgccatt ttctctgtat cttaagaatt tgcgaggtaa
     1021 attttaaggt gtttctaaaa gttctgctgg aacaaaacga taattcttgg aaagatcacg
     1081 acagctttcc gccactatat agttaatgat gttacaaatc cctctaagtt ataagaaaaa
     1141 aaataccaaa ataacatgcc aaacaaaatg aaaagaagct gtaataaact cacaagcctt
     1201 cgtttttggt tggcttttcc tttga