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LOCUS XM_013263498 5783 bp mRNA linear INV 02-SEP-2023 (LOC106096001), transcript variant X5, mRNA. ACCESSION XM_013263498 VERSION XM_013263498.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263498.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5783 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5783 /gene="LOC106096001" /note="protein wings apart-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106096001" CDS 398..5629 /gene="LOC106096001" /codon_start=1 /product="protein wings apart-like" /protein_id="XP_013118952.2" /db_xref="GeneID:106096001" /translation="MSRWGKHIVVPLETSKESTNRPTVARSLGTMGKWGKMGFTSTRT YTMSALPAVVAAAAAAVAAASPQESPASHKEDDQSVSVLEPPKPRKFFKSRNTTPPEV IAQIIQQIPRTPASPTRDSSGTSTMPSFLSTPVREPIKMKIPKSNSAERKKKAPKKTS KKTGTNTTTEGTTETTGDHEADDKPPPEPKSTKKKKEKELKPEAPPSRILGRARKAVN YCEDDYDDRNPTPIKDIVVPKQKKAEKVISVQETPPPTPAHKVDDVYASCDTPEPVLP PPAAPQQPPLIVHQPQAIVNSAASKTPEHPPIVLRISKGTSRLVSTDSEEQQPNASSS TPPSETTAANITLTETPQSSLTLSIAKSRQASVEDSSTPAIITTPKIIVKPLRPPSPV LHPAAVSNQQDEEAEESGEEEEEEEEDEEEAEPEPEPPEINYCTVKISPDKPPKERLK LIIKTDVIRNAIAAAAAAEAKAKAKKELLEASGRSGNEGKSKKNKKRKHLKHAAVEQL TPQQGSSSEFKIPSPHPALGNSNTIHDQLTTHHPPPSSMLHSAPSHSNVTASASRTVV SPAALSEKDFDSQSSVLGSISSKGNSTPLDIQPPPEESCVLHSRGSSVITSDLETSQH SSLVAPPSDIELRLESMMMDGESSQQQRTSATFVEAEPLQEDILAVLRGDETTTAMDV VAEEPQTEAIKENGLEKDNIENIETADDNAVATPVATRGRLTRGRPKPNNQPIANVEP LVQAPRTRGRKPAAVLQPSAIPAEEIPVAPIKRTTRRGKKFVEDTNSPIVMDDTPQAA IPEESSPNKSEEENNPVLAPAVTTRRGRIPRNANNLNNNNNNTNNNNNINKISTNITT KANNPPEAVTNHKLTPSETTTNATPASAAAASAQKSYGRKRKNQQATQVLQASTLQED IEDYSQPTPAKKSSLDLPSTEENLDTQITPMQPFNENRLTPSLDLQENNSLDSCSLPR PPSSLGGENPSLSPPLRDYKIKDKFKRTLTLDTQVNNTVVVKQTDAVSAPTNQQQQVE PVKLVISKKKGSIFKSRVPSEQTEHTGGGKRHLYKHRWDATANGDANSEDNAPATAAN KVSEPKNTNSTVEAIFNDFNSDETRSSPVPPIKMTRVIKPNPQAIPSAGSALDDPMAD SITSVKIDRKAKEYYTVVRNVKTAHQIQEIGEYQEMDDDVEYILDALQPHNPMSTRCL SALQLATKCMVPAFRMHVRAHGVVTKFFKALSDANRDLSLGLCTTAIMYILSQEGLNM DLDRDSLELMMLLLESEQTVAAPADHANYERNKQRVRELCEEIKVQGKATHLNVDSIT VGTLAMETLLSLTSKRAGDWFKEELRELGGLEHIIKTINDCCRPVIDNVYSETGINWT RPLLDNMQTVERCLRVLENVTQLNEENQQYILTYNKGSAATTLCSLYSLCNREIIMYP TSEFTSRDNPGIVIRELLIPLMKVLISLTHPFSPTNTLGAELVGQKADVIDTSLHLLL KAPNYIPDRCVFELSILSLLLLNNLTMYTLQNRKRIMQAGAPSDFNLSHDVTQQPPET AIAAVMAYFYRCEELARLVEKNTDAFLDKQDKNKKKQEEVDETVNNLLQKAGHHMEHS LKGSYTAILIGHLITDNEEYEAIVRSHVKGNCFKEIISVLEKYYNFMNLTASAEASVV AHIKSTQKLLEYFKKRDLLHEDARPFTRNDTDYTDAVPLNLETHHHRQNDELANTSAA NSGTSSTQRVYKTYSQR" polyA_site 5783 /gene="LOC106096001" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atacgtgcag agtccacata aaacataaat atttttaagt attttacaat aattgtagaa 61 tttttgcaac aaaattactt cgtaacgcaa atttcaatgc attatcttcc aagattacat 121 aaaaatttcc aaaatttctc aaaaaatctc aactttatcc gaacccccta tatatgcgat 181 gagcataaaa cgaagaatgt atgtgttggt caaatgaatt tttaatgaat tcaaagtgaa 241 aaatattccc aaaaaaaaac ttgaaatatt tgttgtccct agtaatgggt acaaagataa 301 ttgtatttcc aaaataatat tcaaactata aaataataac ataaatagcc ggatttgtga 361 accacaacaa acagagggca ttaataacta cagcaatatg tctcggtggg gcaaacatat 421 tgtggttcct ttggaaacct ccaaagagag cacaaaccgt cccactgtgg ctcgttctct 481 gggcactatg ggtaaatggg gtaaaatggg ctttacttcg acacgcacct acacaatgtc 541 tgccttgccg gcagtagtag ctgctgctgc tgcggccgta gcagctgcca gcccacagga 601 aagtccagca tcgcataagg aagacgatca atcggtgtcg gttctggaac caccgaaacc 661 acgcaaattc ttcaaatcac gcaataccac accgcccgaa gttatagcac aaatcataca 721 acaaatcccc cgcacacccg catcgcccac tcgcgacagc agcggtacgt ctactatgcc 781 ctcctttcta agcacacccg tacgtgaacc catcaaaatg aaaataccca aaagcaattc 841 tgcagagcgg aaaaagaaag cacctaagaa aacttccaaa aagaccggca ctaacaccac 901 caccgagggc acaacggaaa caactggaga tcatgaagcc gacgacaaac cgccacccga 961 accgaaatca acgaaaaaga agaaagaaaa agagcttaaa ccagaggcgc caccttcacg 1021 tattttgggc agagctcgca aagctgtcaa ctattgtgag gatgattatg acgatcgaaa 1081 tcctacgccc attaaggata ttgtagtgcc gaaacaaaag aaggcggaaa aggtgatcag 1141 tgttcaagag acgccgccac caacgcctgc acacaaagtc gatgatgttt atgcatcgtg 1201 tgatacaccg gaaccggtgt tacctccacc ggcagcaccg caacaaccac cattaatagt 1261 acatcagccc caagcaattg taaatagtgc agcttccaaa acgcccgaac atcctcccat 1321 tgtactaaga atatcaaagg gtacctcacg cttagtcagt actgatagtg aagaacaaca 1381 accgaatgct tcctcatcaa cgccgccatc cgaaacaaca gctgctaaca taacgctcac 1441 agagacgcca cagtcttcat tgacgttgtc tatagcgaaa tctcgacaag cctccgtaga 1501 agattcctca acacccgcca ttattacaac gccgaagatt attgtgaaac ctttgaggcc 1561 accttcacct gtattacatc cagctgcagt ctccaaccaa caggacgagg aagccgaaga 1621 aagtggtgaa gaggaggagg aggaagaaga ggacgaggaa gaagctgaac cagagccgga 1681 accaccagaa ataaactatt gcactgttaa aatatctcca gataagccac caaaagaacg 1741 cttgaagttg attatcaaaa cagatgttat ccgaaatgcc atagcagcgg cggccgcagc 1801 cgaagcaaag gcgaaagcaa aaaaggagct tcttgaagcc tctggacgtt ctggtaatga 1861 gggaaaatct aaaaagaata aaaaacgcaa acatttaaaa cacgctgcgg ttgaacaact 1921 tacgccacaa caaggatcat caagtgaatt taaaatccct tcgccacatc ccgctctagg 1981 caatagtaat actatacatg atcaactcac gacacatcac ccgcctcctt catctatgct 2041 gcattcagct ccctcacact caaatgtaac tgcatccgcc tctagaaccg tagtatctcc 2101 tgcagcttta tccgaaaaag atttcgactc tcaatcatct gttctgggga gtatatcgtc 2161 aaaaggcaat agtacgccgt tagacataca accgcctccg gaagaaagtt gtgttttaca 2221 tagtagaggc tctagtgtga taacaagtga ccttgagaca agccagcact catcgctggt 2281 ggcgcctccc tcggacattg aattaagact ggagtccatg atgatggatg gggaaagtag 2341 tcaacagcaa cgaacctctg ctacttttgt tgaagccgaa cctttgcaag aggacatatt 2401 ggctgtactg agaggtgatg aaacaacaac agccatggat gtagtagcgg aagagccaca 2461 aacagaggct ataaaagaaa acggcttaga gaaagacaat atcgaaaaca tagaaacagc 2521 ggatgataat gctgttgcta ctcccgtcgc cacaaggggt cgcctaacaa gaggacggcc 2581 caaacccaac aaccaaccca tagccaacgt cgaacctcta gtacaagcgc cgagaacgcg 2641 aggacgcaag ccagctgctg ttttacagcc ctctgccatt cccgctgagg aaattcctgt 2701 cgctcccatt aaacgcacaa cacgaagagg aaagaagttt gtagaggaca ccaattcacc 2761 gatcgttatg gatgacacac ctcaagcggc aattccagag gaatcatctc caaataaatc 2821 agaggaagaa aataatcctg tcttggcccc ggcggttacc acaagaagag gcagaatacc 2881 acgcaatgcc aacaacctta ataataacaa caataatacc aacaataata acaatattaa 2941 caaaatttcg acaaacatta cgactaaagc caataacccg ccggaagcag ttaccaacca 3001 taagcttaca cctagcgaga caacgacgaa tgccacgccc gcatcagcgg cagccgctag 3061 cgcacaaaaa agctatggtc gcaaacgaaa gaatcagcaa gcaacacaag tgttgcaagc 3121 aagtacccta caggaagaca ttgaagacta ctcacaaccc acacccgcca aaaagtctag 3181 ccttgatttg ccctctacag aggaaaatct cgacactcaa attacaccta tgcagccatt 3241 caacgagaat cgactcacac cctctttgga tctgcaggag aataattcgc tggattcttg 3301 ttccttaccg cgaccgccta gcagcttagg cggcgaaaat ccgtcgcttt caccacctct 3361 gagagactac aagataaagg ataaattcaa gcgtacctta acccttgaca ctcaagtcaa 3421 taacacagtg gtggtaaagc aaaccgatgc cgtatccgcc cccacaaatc aacaacagca 3481 ggtcgaacct gtcaagttag ttatctccaa aaagaagggt agcatcttta agagtagagt 3541 accatcagag caaactgaac acacgggagg aggtaaaaga catttgtata agcaccgatg 3601 ggatgcaaca gccaatggcg atgcaaacag cgaagacaat gcgcccgcca cagctgccaa 3661 caaagtttcc gagcccaaga acacaaattc tacagtggaa gccatcttta atgacttcaa 3721 tagcgatgaa actcgcagca gtcctgtacc tcccattaaa atgacaaggg tcattaaacc 3781 aaaccctcaa gcaattcctt cagcgggatc tgcgctggac gaccccatgg ctgattcaat 3841 tacgtcggtg aaaattgata gaaaagcgaa agaatattac acagtggtgc gtaacgtcaa 3901 aacagcccat caaatccaag aaatcggaga atatcaagaa atggatgatg acgttgagta 3961 tattctggat gctttgcaac cccacaatcc catgtccact cgttgcctgt cagccctgca 4021 attagccacc aaatgtatgg ttcctgcttt ccgtatgcat gttcgggcgc acggtgttgt 4081 aactaaattc ttcaaagccc tctctgatgc aaatcgtgat ctctcactgg gactgtgtac 4141 tacagcaatt atgtacattt tgtctcaaga aggtttaaat atggatttgg atagggattc 4201 gctggagcta atgatgctgc tgctagaatc cgaacaaacg gtagcagcgc cagcagatca 4261 tgccaactac gagagaaaca aacaaagagt aagagaactg tgtgaggaaa tcaaagtcca 4321 gggcaaagca acacatttaa atgttgactc gatcaccgtg ggtaccctag ccatggaaac 4381 gttgctatct cttacttcca aacgggcggg ggattggttc aaagaggaac tgcgagaatt 4441 gggcggtctg gagcacatta taaaaactat caacgattgc tgtcgtccgg tcattgacaa 4501 tgtgtacagt gagacgggca ttaattggac gcgacctctt ttagataata tgcaaaccgt 4561 ggaacggtgc ctgcgtgttt tggaaaatgt cactcaatta aatgaagaaa atcaacagta 4621 catactcaca tataacaagg gttcggccgc aacgacgtta tgttccctgt attccctctg 4681 taatcgtgag ataataatgt atccaacatc agagtttaca tcacgagaca atccgggcat 4741 tgttatacga gaattgttga ttcctcttat gaaagtgctc atcagtttaa cgcatccgtt 4801 tagtccgacg aacacattag gtgccgaatt ggtggggcaa aaggctgatg ttatcgatac 4861 aagtctccat ttgctattga aggcacccaa ctacattccg gatcgctgtg tctttgaact 4921 tagtatattg tcccttttac tgctgaacaa tctaacaatg tacaccttgc aaaatcgtaa 4981 acgcattatg caagctggag ctccttccga ctttaattta agccatgatg tcacgcagca 5041 accgccggaa accgcaatag cagctgtaat ggcttacttc tatagatgtg aagaactagc 5101 acgattggtg gaaaagaaca ctgatgcctt tctggataaa caggataaga ataaaaagaa 5161 gcaagaagaa gttgatgaga ctgtaaataa tttactccaa aaagctggtc atcatatgga 5221 acattccctg aaaggcagtt acacggcaat attaattgga catttaatta ccgacaatga 5281 agaatatgaa gcaattgtac ggtctcatgt taagggcaat tgtttcaagg agattataag 5341 cgttttagag aaatactaca actttatgaa tttaacagcc agtgccgaag cttcggtggt 5401 agcacacata aaatcgacac aaaaattatt ggaatatttc aaaaaacgcg atcttttgca 5461 tgaggatgca aggccgttca cacgaaacga tacagattat actgatgcgg tgccgcttaa 5521 cttggaaaca catcatcatc ggcaaaatga tgagctagcc aatacatcgg cggctaatag 5581 tggtacatca tccacgcagc gtgtttacaa gacctacagt caaagataag aataattgag 5641 caacacatag aaaaagttga acccgtaaaa ttgcaacttt gttttgtttt taatttaaaa 5701 atttaattaa tagcatattt aaggtatatt tttaatactt tttgttttag aaaaagaaac 5761 aatgtgtaat atttcgtttt aaa