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LOCUS XM_013263497 5898 bp mRNA linear INV 02-SEP-2023 (LOC106096001), transcript variant X4, mRNA. ACCESSION XM_013263497 VERSION XM_013263497.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263497.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5898 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5898 /gene="LOC106096001" /note="protein wings apart-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106096001" CDS 513..5744 /gene="LOC106096001" /codon_start=1 /product="protein wings apart-like" /protein_id="XP_013118951.2" /db_xref="GeneID:106096001" /translation="MSRWGKHIVVPLETSKESTNRPTVARSLGTMGKWGKMGFTSTRT YTMSALPAVVAAAAAAVAAASPQESPASHKEDDQSVSVLEPPKPRKFFKSRNTTPPEV IAQIIQQIPRTPASPTRDSSGTSTMPSFLSTPVREPIKMKIPKSNSAERKKKAPKKTS KKTGTNTTTEGTTETTGDHEADDKPPPEPKSTKKKKEKELKPEAPPSRILGRARKAVN YCEDDYDDRNPTPIKDIVVPKQKKAEKVISVQETPPPTPAHKVDDVYASCDTPEPVLP PPAAPQQPPLIVHQPQAIVNSAASKTPEHPPIVLRISKGTSRLVSTDSEEQQPNASSS TPPSETTAANITLTETPQSSLTLSIAKSRQASVEDSSTPAIITTPKIIVKPLRPPSPV LHPAAVSNQQDEEAEESGEEEEEEEEDEEEAEPEPEPPEINYCTVKISPDKPPKERLK LIIKTDVIRNAIAAAAAAEAKAKAKKELLEASGRSGNEGKSKKNKKRKHLKHAAVEQL TPQQGSSSEFKIPSPHPALGNSNTIHDQLTTHHPPPSSMLHSAPSHSNVTASASRTVV SPAALSEKDFDSQSSVLGSISSKGNSTPLDIQPPPEESCVLHSRGSSVITSDLETSQH SSLVAPPSDIELRLESMMMDGESSQQQRTSATFVEAEPLQEDILAVLRGDETTTAMDV VAEEPQTEAIKENGLEKDNIENIETADDNAVATPVATRGRLTRGRPKPNNQPIANVEP LVQAPRTRGRKPAAVLQPSAIPAEEIPVAPIKRTTRRGKKFVEDTNSPIVMDDTPQAA IPEESSPNKSEEENNPVLAPAVTTRRGRIPRNANNLNNNNNNTNNNNNINKISTNITT KANNPPEAVTNHKLTPSETTTNATPASAAAASAQKSYGRKRKNQQATQVLQASTLQED IEDYSQPTPAKKSSLDLPSTEENLDTQITPMQPFNENRLTPSLDLQENNSLDSCSLPR PPSSLGGENPSLSPPLRDYKIKDKFKRTLTLDTQVNNTVVVKQTDAVSAPTNQQQQVE PVKLVISKKKGSIFKSRVPSEQTEHTGGGKRHLYKHRWDATANGDANSEDNAPATAAN KVSEPKNTNSTVEAIFNDFNSDETRSSPVPPIKMTRVIKPNPQAIPSAGSALDDPMAD SITSVKIDRKAKEYYTVVRNVKTAHQIQEIGEYQEMDDDVEYILDALQPHNPMSTRCL SALQLATKCMVPAFRMHVRAHGVVTKFFKALSDANRDLSLGLCTTAIMYILSQEGLNM DLDRDSLELMMLLLESEQTVAAPADHANYERNKQRVRELCEEIKVQGKATHLNVDSIT VGTLAMETLLSLTSKRAGDWFKEELRELGGLEHIIKTINDCCRPVIDNVYSETGINWT RPLLDNMQTVERCLRVLENVTQLNEENQQYILTYNKGSAATTLCSLYSLCNREIIMYP TSEFTSRDNPGIVIRELLIPLMKVLISLTHPFSPTNTLGAELVGQKADVIDTSLHLLL KAPNYIPDRCVFELSILSLLLLNNLTMYTLQNRKRIMQAGAPSDFNLSHDVTQQPPET AIAAVMAYFYRCEELARLVEKNTDAFLDKQDKNKKKQEEVDETVNNLLQKAGHHMEHS LKGSYTAILIGHLITDNEEYEAIVRSHVKGNCFKEIISVLEKYYNFMNLTASAEASVV AHIKSTQKLLEYFKKRDLLHEDARPFTRNDTDYTDAVPLNLETHHHRQNDELANTSAA NSGTSSTQRVYKTYSQR" polyA_site 5898 /gene="LOC106096001" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atacgtgcag agtccacata aaacataaat atttttaagt attttacaat aattgtagaa 61 tttttgcaac aaaattactt cgtaacgcaa atttcaatgc attatcttcc aagattacat 121 gttagttggc cgcgaaaata gtgaattgtt ggtaaaaaaa agaagtgaaa aatttggcca 181 aatggcctac gagatgaaaa cgtagaaaaa gaagtggcca ggcagtcagt atgtaaaaaa 241 tttccaaaat ttctcaaaaa atctcaactt tatccgaacc ccctatatat gcgatgagca 301 taaaacgaag aatgtatgtg ttggtcaaat gaatttttaa tgaattcaaa gtgaaaaata 361 ttcccaaaaa aaaacttgaa atatttgttg tccctagtaa tgggtacaaa gataattgta 421 tttccaaaat aatattcaaa ctataaaata ataacataaa tagccggatt tgtgaaccac 481 aacaaacaga gggcattaat aactacagca atatgtctcg gtggggcaaa catattgtgg 541 ttcctttgga aacctccaaa gagagcacaa accgtcccac tgtggctcgt tctctgggca 601 ctatgggtaa atggggtaaa atgggcttta cttcgacacg cacctacaca atgtctgcct 661 tgccggcagt agtagctgct gctgctgcgg ccgtagcagc tgccagccca caggaaagtc 721 cagcatcgca taaggaagac gatcaatcgg tgtcggttct ggaaccaccg aaaccacgca 781 aattcttcaa atcacgcaat accacaccgc ccgaagttat agcacaaatc atacaacaaa 841 tcccccgcac acccgcatcg cccactcgcg acagcagcgg tacgtctact atgccctcct 901 ttctaagcac acccgtacgt gaacccatca aaatgaaaat acccaaaagc aattctgcag 961 agcggaaaaa gaaagcacct aagaaaactt ccaaaaagac cggcactaac accaccaccg 1021 agggcacaac ggaaacaact ggagatcatg aagccgacga caaaccgcca cccgaaccga 1081 aatcaacgaa aaagaagaaa gaaaaagagc ttaaaccaga ggcgccacct tcacgtattt 1141 tgggcagagc tcgcaaagct gtcaactatt gtgaggatga ttatgacgat cgaaatccta 1201 cgcccattaa ggatattgta gtgccgaaac aaaagaaggc ggaaaaggtg atcagtgttc 1261 aagagacgcc gccaccaacg cctgcacaca aagtcgatga tgtttatgca tcgtgtgata 1321 caccggaacc ggtgttacct ccaccggcag caccgcaaca accaccatta atagtacatc 1381 agccccaagc aattgtaaat agtgcagctt ccaaaacgcc cgaacatcct cccattgtac 1441 taagaatatc aaagggtacc tcacgcttag tcagtactga tagtgaagaa caacaaccga 1501 atgcttcctc atcaacgccg ccatccgaaa caacagctgc taacataacg ctcacagaga 1561 cgccacagtc ttcattgacg ttgtctatag cgaaatctcg acaagcctcc gtagaagatt 1621 cctcaacacc cgccattatt acaacgccga agattattgt gaaacctttg aggccacctt 1681 cacctgtatt acatccagct gcagtctcca accaacagga cgaggaagcc gaagaaagtg 1741 gtgaagagga ggaggaggaa gaagaggacg aggaagaagc tgaaccagag ccggaaccac 1801 cagaaataaa ctattgcact gttaaaatat ctccagataa gccaccaaaa gaacgcttga 1861 agttgattat caaaacagat gttatccgaa atgccatagc agcggcggcc gcagccgaag 1921 caaaggcgaa agcaaaaaag gagcttcttg aagcctctgg acgttctggt aatgagggaa 1981 aatctaaaaa gaataaaaaa cgcaaacatt taaaacacgc tgcggttgaa caacttacgc 2041 cacaacaagg atcatcaagt gaatttaaaa tcccttcgcc acatcccgct ctaggcaata 2101 gtaatactat acatgatcaa ctcacgacac atcacccgcc tccttcatct atgctgcatt 2161 cagctccctc acactcaaat gtaactgcat ccgcctctag aaccgtagta tctcctgcag 2221 ctttatccga aaaagatttc gactctcaat catctgttct ggggagtata tcgtcaaaag 2281 gcaatagtac gccgttagac atacaaccgc ctccggaaga aagttgtgtt ttacatagta 2341 gaggctctag tgtgataaca agtgaccttg agacaagcca gcactcatcg ctggtggcgc 2401 ctccctcgga cattgaatta agactggagt ccatgatgat ggatggggaa agtagtcaac 2461 agcaacgaac ctctgctact tttgttgaag ccgaaccttt gcaagaggac atattggctg 2521 tactgagagg tgatgaaaca acaacagcca tggatgtagt agcggaagag ccacaaacag 2581 aggctataaa agaaaacggc ttagagaaag acaatatcga aaacatagaa acagcggatg 2641 ataatgctgt tgctactccc gtcgccacaa ggggtcgcct aacaagagga cggcccaaac 2701 ccaacaacca acccatagcc aacgtcgaac ctctagtaca agcgccgaga acgcgaggac 2761 gcaagccagc tgctgtttta cagccctctg ccattcccgc tgaggaaatt cctgtcgctc 2821 ccattaaacg cacaacacga agaggaaaga agtttgtaga ggacaccaat tcaccgatcg 2881 ttatggatga cacacctcaa gcggcaattc cagaggaatc atctccaaat aaatcagagg 2941 aagaaaataa tcctgtcttg gccccggcgg ttaccacaag aagaggcaga ataccacgca 3001 atgccaacaa ccttaataat aacaacaata ataccaacaa taataacaat attaacaaaa 3061 tttcgacaaa cattacgact aaagccaata acccgccgga agcagttacc aaccataagc 3121 ttacacctag cgagacaacg acgaatgcca cgcccgcatc agcggcagcc gctagcgcac 3181 aaaaaagcta tggtcgcaaa cgaaagaatc agcaagcaac acaagtgttg caagcaagta 3241 ccctacagga agacattgaa gactactcac aacccacacc cgccaaaaag tctagccttg 3301 atttgccctc tacagaggaa aatctcgaca ctcaaattac acctatgcag ccattcaacg 3361 agaatcgact cacaccctct ttggatctgc aggagaataa ttcgctggat tcttgttcct 3421 taccgcgacc gcctagcagc ttaggcggcg aaaatccgtc gctttcacca cctctgagag 3481 actacaagat aaaggataaa ttcaagcgta ccttaaccct tgacactcaa gtcaataaca 3541 cagtggtggt aaagcaaacc gatgccgtat ccgcccccac aaatcaacaa cagcaggtcg 3601 aacctgtcaa gttagttatc tccaaaaaga agggtagcat ctttaagagt agagtaccat 3661 cagagcaaac tgaacacacg ggaggaggta aaagacattt gtataagcac cgatgggatg 3721 caacagccaa tggcgatgca aacagcgaag acaatgcgcc cgccacagct gccaacaaag 3781 tttccgagcc caagaacaca aattctacag tggaagccat ctttaatgac ttcaatagcg 3841 atgaaactcg cagcagtcct gtacctccca ttaaaatgac aagggtcatt aaaccaaacc 3901 ctcaagcaat tccttcagcg ggatctgcgc tggacgaccc catggctgat tcaattacgt 3961 cggtgaaaat tgatagaaaa gcgaaagaat attacacagt ggtgcgtaac gtcaaaacag 4021 cccatcaaat ccaagaaatc ggagaatatc aagaaatgga tgatgacgtt gagtatattc 4081 tggatgcttt gcaaccccac aatcccatgt ccactcgttg cctgtcagcc ctgcaattag 4141 ccaccaaatg tatggttcct gctttccgta tgcatgttcg ggcgcacggt gttgtaacta 4201 aattcttcaa agccctctct gatgcaaatc gtgatctctc actgggactg tgtactacag 4261 caattatgta cattttgtct caagaaggtt taaatatgga tttggatagg gattcgctgg 4321 agctaatgat gctgctgcta gaatccgaac aaacggtagc agcgccagca gatcatgcca 4381 actacgagag aaacaaacaa agagtaagag aactgtgtga ggaaatcaaa gtccagggca 4441 aagcaacaca tttaaatgtt gactcgatca ccgtgggtac cctagccatg gaaacgttgc 4501 tatctcttac ttccaaacgg gcgggggatt ggttcaaaga ggaactgcga gaattgggcg 4561 gtctggagca cattataaaa actatcaacg attgctgtcg tccggtcatt gacaatgtgt 4621 acagtgagac gggcattaat tggacgcgac ctcttttaga taatatgcaa accgtggaac 4681 ggtgcctgcg tgttttggaa aatgtcactc aattaaatga agaaaatcaa cagtacatac 4741 tcacatataa caagggttcg gccgcaacga cgttatgttc cctgtattcc ctctgtaatc 4801 gtgagataat aatgtatcca acatcagagt ttacatcacg agacaatccg ggcattgtta 4861 tacgagaatt gttgattcct cttatgaaag tgctcatcag tttaacgcat ccgtttagtc 4921 cgacgaacac attaggtgcc gaattggtgg ggcaaaaggc tgatgttatc gatacaagtc 4981 tccatttgct attgaaggca cccaactaca ttccggatcg ctgtgtcttt gaacttagta 5041 tattgtccct tttactgctg aacaatctaa caatgtacac cttgcaaaat cgtaaacgca 5101 ttatgcaagc tggagctcct tccgacttta atttaagcca tgatgtcacg cagcaaccgc 5161 cggaaaccgc aatagcagct gtaatggctt acttctatag atgtgaagaa ctagcacgat 5221 tggtggaaaa gaacactgat gcctttctgg ataaacagga taagaataaa aagaagcaag 5281 aagaagttga tgagactgta aataatttac tccaaaaagc tggtcatcat atggaacatt 5341 ccctgaaagg cagttacacg gcaatattaa ttggacattt aattaccgac aatgaagaat 5401 atgaagcaat tgtacggtct catgttaagg gcaattgttt caaggagatt ataagcgttt 5461 tagagaaata ctacaacttt atgaatttaa cagccagtgc cgaagcttcg gtggtagcac 5521 acataaaatc gacacaaaaa ttattggaat atttcaaaaa acgcgatctt ttgcatgagg 5581 atgcaaggcc gttcacacga aacgatacag attatactga tgcggtgccg cttaacttgg 5641 aaacacatca tcatcggcaa aatgatgagc tagccaatac atcggcggct aatagtggta 5701 catcatccac gcagcgtgtt tacaagacct acagtcaaag ataagaataa ttgagcaaca 5761 catagaaaaa gttgaacccg taaaattgca actttgtttt gtttttaatt taaaaattta 5821 attaatagca tatttaaggt atatttttaa tactttttgt tttagaaaaa gaaacaatgt 5881 gtaatatttc gttttaaa