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LOCUS XM_013263496 6122 bp mRNA linear INV 02-SEP-2023 (LOC106096001), transcript variant X1, mRNA. ACCESSION XM_013263496 VERSION XM_013263496.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263496.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6122 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6122 /gene="LOC106096001" /note="protein wings apart-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106096001" CDS 737..5968 /gene="LOC106096001" /codon_start=1 /product="protein wings apart-like" /protein_id="XP_013118950.2" /db_xref="GeneID:106096001" /translation="MSRWGKHIVVPLETSKESTNRPTVARSLGTMGKWGKMGFTSTRT YTMSALPAVVAAAAAAVAAASPQESPASHKEDDQSVSVLEPPKPRKFFKSRNTTPPEV IAQIIQQIPRTPASPTRDSSGTSTMPSFLSTPVREPIKMKIPKSNSAERKKKAPKKTS KKTGTNTTTEGTTETTGDHEADDKPPPEPKSTKKKKEKELKPEAPPSRILGRARKAVN YCEDDYDDRNPTPIKDIVVPKQKKAEKVISVQETPPPTPAHKVDDVYASCDTPEPVLP PPAAPQQPPLIVHQPQAIVNSAASKTPEHPPIVLRISKGTSRLVSTDSEEQQPNASSS TPPSETTAANITLTETPQSSLTLSIAKSRQASVEDSSTPAIITTPKIIVKPLRPPSPV LHPAAVSNQQDEEAEESGEEEEEEEEDEEEAEPEPEPPEINYCTVKISPDKPPKERLK LIIKTDVIRNAIAAAAAAEAKAKAKKELLEASGRSGNEGKSKKNKKRKHLKHAAVEQL TPQQGSSSEFKIPSPHPALGNSNTIHDQLTTHHPPPSSMLHSAPSHSNVTASASRTVV SPAALSEKDFDSQSSVLGSISSKGNSTPLDIQPPPEESCVLHSRGSSVITSDLETSQH SSLVAPPSDIELRLESMMMDGESSQQQRTSATFVEAEPLQEDILAVLRGDETTTAMDV VAEEPQTEAIKENGLEKDNIENIETADDNAVATPVATRGRLTRGRPKPNNQPIANVEP LVQAPRTRGRKPAAVLQPSAIPAEEIPVAPIKRTTRRGKKFVEDTNSPIVMDDTPQAA IPEESSPNKSEEENNPVLAPAVTTRRGRIPRNANNLNNNNNNTNNNNNINKISTNITT KANNPPEAVTNHKLTPSETTTNATPASAAAASAQKSYGRKRKNQQATQVLQASTLQED IEDYSQPTPAKKSSLDLPSTEENLDTQITPMQPFNENRLTPSLDLQENNSLDSCSLPR PPSSLGGENPSLSPPLRDYKIKDKFKRTLTLDTQVNNTVVVKQTDAVSAPTNQQQQVE PVKLVISKKKGSIFKSRVPSEQTEHTGGGKRHLYKHRWDATANGDANSEDNAPATAAN KVSEPKNTNSTVEAIFNDFNSDETRSSPVPPIKMTRVIKPNPQAIPSAGSALDDPMAD SITSVKIDRKAKEYYTVVRNVKTAHQIQEIGEYQEMDDDVEYILDALQPHNPMSTRCL SALQLATKCMVPAFRMHVRAHGVVTKFFKALSDANRDLSLGLCTTAIMYILSQEGLNM DLDRDSLELMMLLLESEQTVAAPADHANYERNKQRVRELCEEIKVQGKATHLNVDSIT VGTLAMETLLSLTSKRAGDWFKEELRELGGLEHIIKTINDCCRPVIDNVYSETGINWT RPLLDNMQTVERCLRVLENVTQLNEENQQYILTYNKGSAATTLCSLYSLCNREIIMYP TSEFTSRDNPGIVIRELLIPLMKVLISLTHPFSPTNTLGAELVGQKADVIDTSLHLLL KAPNYIPDRCVFELSILSLLLLNNLTMYTLQNRKRIMQAGAPSDFNLSHDVTQQPPET AIAAVMAYFYRCEELARLVEKNTDAFLDKQDKNKKKQEEVDETVNNLLQKAGHHMEHS LKGSYTAILIGHLITDNEEYEAIVRSHVKGNCFKEIISVLEKYYNFMNLTASAEASVV AHIKSTQKLLEYFKKRDLLHEDARPFTRNDTDYTDAVPLNLETHHHRQNDELANTSAA NSGTSSTQRVYKTYSQR" polyA_site 6122 /gene="LOC106096001" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atacgtgcag agtccacata aaacataaat atttttaagt attttacaat aattgtagaa 61 tttttgcaac aaaattactt cgtaacgcaa atttcaatgc attatcttcc aagattacat 121 gttagttggc cgcgaaaata gtgaattgtt ggtaaaaaaa agaagtgaaa aatttggcca 181 aatggcctac gagatgaaaa cgtagaaaaa gaagtggcca ggcagtcagt atgtagtacg 241 tcgttgtgct gtccaccatt caattgttta aattaagtcc tgaggaggct tcatcctcag 301 gcagtatgcg tcgatttatg catatattcc aaaaatacat ttagaaaaag tgtaaaaatt 361 atgaaaaatc cagtggaaac catgggaaaa aattgcgcca ataagtaaaa gtgggaacaa 421 ccacatcaca cacatacaag caaaaatcag atgaaactta aaaatttcca aaatttctca 481 aaaaatctca actttatccg aaccccctat atatgcgatg agcataaaac gaagaatgta 541 tgtgttggtc aaatgaattt ttaatgaatt caaagtgaaa aatattccca aaaaaaaact 601 tgaaatattt gttgtcccta gtaatgggta caaagataat tgtatttcca aaataatatt 661 caaactataa aataataaca taaatagccg gatttgtgaa ccacaacaaa cagagggcat 721 taataactac agcaatatgt ctcggtgggg caaacatatt gtggttcctt tggaaacctc 781 caaagagagc acaaaccgtc ccactgtggc tcgttctctg ggcactatgg gtaaatgggg 841 taaaatgggc tttacttcga cacgcaccta cacaatgtct gccttgccgg cagtagtagc 901 tgctgctgct gcggccgtag cagctgccag cccacaggaa agtccagcat cgcataagga 961 agacgatcaa tcggtgtcgg ttctggaacc accgaaacca cgcaaattct tcaaatcacg 1021 caataccaca ccgcccgaag ttatagcaca aatcatacaa caaatccccc gcacacccgc 1081 atcgcccact cgcgacagca gcggtacgtc tactatgccc tcctttctaa gcacacccgt 1141 acgtgaaccc atcaaaatga aaatacccaa aagcaattct gcagagcgga aaaagaaagc 1201 acctaagaaa acttccaaaa agaccggcac taacaccacc accgagggca caacggaaac 1261 aactggagat catgaagccg acgacaaacc gccacccgaa ccgaaatcaa cgaaaaagaa 1321 gaaagaaaaa gagcttaaac cagaggcgcc accttcacgt attttgggca gagctcgcaa 1381 agctgtcaac tattgtgagg atgattatga cgatcgaaat cctacgccca ttaaggatat 1441 tgtagtgccg aaacaaaaga aggcggaaaa ggtgatcagt gttcaagaga cgccgccacc 1501 aacgcctgca cacaaagtcg atgatgttta tgcatcgtgt gatacaccgg aaccggtgtt 1561 acctccaccg gcagcaccgc aacaaccacc attaatagta catcagcccc aagcaattgt 1621 aaatagtgca gcttccaaaa cgcccgaaca tcctcccatt gtactaagaa tatcaaaggg 1681 tacctcacgc ttagtcagta ctgatagtga agaacaacaa ccgaatgctt cctcatcaac 1741 gccgccatcc gaaacaacag ctgctaacat aacgctcaca gagacgccac agtcttcatt 1801 gacgttgtct atagcgaaat ctcgacaagc ctccgtagaa gattcctcaa cacccgccat 1861 tattacaacg ccgaagatta ttgtgaaacc tttgaggcca ccttcacctg tattacatcc 1921 agctgcagtc tccaaccaac aggacgagga agccgaagaa agtggtgaag aggaggagga 1981 ggaagaagag gacgaggaag aagctgaacc agagccggaa ccaccagaaa taaactattg 2041 cactgttaaa atatctccag ataagccacc aaaagaacgc ttgaagttga ttatcaaaac 2101 agatgttatc cgaaatgcca tagcagcggc ggccgcagcc gaagcaaagg cgaaagcaaa 2161 aaaggagctt cttgaagcct ctggacgttc tggtaatgag ggaaaatcta aaaagaataa 2221 aaaacgcaaa catttaaaac acgctgcggt tgaacaactt acgccacaac aaggatcatc 2281 aagtgaattt aaaatccctt cgccacatcc cgctctaggc aatagtaata ctatacatga 2341 tcaactcacg acacatcacc cgcctccttc atctatgctg cattcagctc cctcacactc 2401 aaatgtaact gcatccgcct ctagaaccgt agtatctcct gcagctttat ccgaaaaaga 2461 tttcgactct caatcatctg ttctggggag tatatcgtca aaaggcaata gtacgccgtt 2521 agacatacaa ccgcctccgg aagaaagttg tgttttacat agtagaggct ctagtgtgat 2581 aacaagtgac cttgagacaa gccagcactc atcgctggtg gcgcctccct cggacattga 2641 attaagactg gagtccatga tgatggatgg ggaaagtagt caacagcaac gaacctctgc 2701 tacttttgtt gaagccgaac ctttgcaaga ggacatattg gctgtactga gaggtgatga 2761 aacaacaaca gccatggatg tagtagcgga agagccacaa acagaggcta taaaagaaaa 2821 cggcttagag aaagacaata tcgaaaacat agaaacagcg gatgataatg ctgttgctac 2881 tcccgtcgcc acaaggggtc gcctaacaag aggacggccc aaacccaaca accaacccat 2941 agccaacgtc gaacctctag tacaagcgcc gagaacgcga ggacgcaagc cagctgctgt 3001 tttacagccc tctgccattc ccgctgagga aattcctgtc gctcccatta aacgcacaac 3061 acgaagagga aagaagtttg tagaggacac caattcaccg atcgttatgg atgacacacc 3121 tcaagcggca attccagagg aatcatctcc aaataaatca gaggaagaaa ataatcctgt 3181 cttggccccg gcggttacca caagaagagg cagaatacca cgcaatgcca acaaccttaa 3241 taataacaac aataatacca acaataataa caatattaac aaaatttcga caaacattac 3301 gactaaagcc aataacccgc cggaagcagt taccaaccat aagcttacac ctagcgagac 3361 aacgacgaat gccacgcccg catcagcggc agccgctagc gcacaaaaaa gctatggtcg 3421 caaacgaaag aatcagcaag caacacaagt gttgcaagca agtaccctac aggaagacat 3481 tgaagactac tcacaaccca cacccgccaa aaagtctagc cttgatttgc cctctacaga 3541 ggaaaatctc gacactcaaa ttacacctat gcagccattc aacgagaatc gactcacacc 3601 ctctttggat ctgcaggaga ataattcgct ggattcttgt tccttaccgc gaccgcctag 3661 cagcttaggc ggcgaaaatc cgtcgctttc accacctctg agagactaca agataaagga 3721 taaattcaag cgtaccttaa cccttgacac tcaagtcaat aacacagtgg tggtaaagca 3781 aaccgatgcc gtatccgccc ccacaaatca acaacagcag gtcgaacctg tcaagttagt 3841 tatctccaaa aagaagggta gcatctttaa gagtagagta ccatcagagc aaactgaaca 3901 cacgggagga ggtaaaagac atttgtataa gcaccgatgg gatgcaacag ccaatggcga 3961 tgcaaacagc gaagacaatg cgcccgccac agctgccaac aaagtttccg agcccaagaa 4021 cacaaattct acagtggaag ccatctttaa tgacttcaat agcgatgaaa ctcgcagcag 4081 tcctgtacct cccattaaaa tgacaagggt cattaaacca aaccctcaag caattccttc 4141 agcgggatct gcgctggacg accccatggc tgattcaatt acgtcggtga aaattgatag 4201 aaaagcgaaa gaatattaca cagtggtgcg taacgtcaaa acagcccatc aaatccaaga 4261 aatcggagaa tatcaagaaa tggatgatga cgttgagtat attctggatg ctttgcaacc 4321 ccacaatccc atgtccactc gttgcctgtc agccctgcaa ttagccacca aatgtatggt 4381 tcctgctttc cgtatgcatg ttcgggcgca cggtgttgta actaaattct tcaaagccct 4441 ctctgatgca aatcgtgatc tctcactggg actgtgtact acagcaatta tgtacatttt 4501 gtctcaagaa ggtttaaata tggatttgga tagggattcg ctggagctaa tgatgctgct 4561 gctagaatcc gaacaaacgg tagcagcgcc agcagatcat gccaactacg agagaaacaa 4621 acaaagagta agagaactgt gtgaggaaat caaagtccag ggcaaagcaa cacatttaaa 4681 tgttgactcg atcaccgtgg gtaccctagc catggaaacg ttgctatctc ttacttccaa 4741 acgggcgggg gattggttca aagaggaact gcgagaattg ggcggtctgg agcacattat 4801 aaaaactatc aacgattgct gtcgtccggt cattgacaat gtgtacagtg agacgggcat 4861 taattggacg cgacctcttt tagataatat gcaaaccgtg gaacggtgcc tgcgtgtttt 4921 ggaaaatgtc actcaattaa atgaagaaaa tcaacagtac atactcacat ataacaaggg 4981 ttcggccgca acgacgttat gttccctgta ttccctctgt aatcgtgaga taataatgta 5041 tccaacatca gagtttacat cacgagacaa tccgggcatt gttatacgag aattgttgat 5101 tcctcttatg aaagtgctca tcagtttaac gcatccgttt agtccgacga acacattagg 5161 tgccgaattg gtggggcaaa aggctgatgt tatcgataca agtctccatt tgctattgaa 5221 ggcacccaac tacattccgg atcgctgtgt ctttgaactt agtatattgt cccttttact 5281 gctgaacaat ctaacaatgt acaccttgca aaatcgtaaa cgcattatgc aagctggagc 5341 tccttccgac tttaatttaa gccatgatgt cacgcagcaa ccgccggaaa ccgcaatagc 5401 agctgtaatg gcttacttct atagatgtga agaactagca cgattggtgg aaaagaacac 5461 tgatgccttt ctggataaac aggataagaa taaaaagaag caagaagaag ttgatgagac 5521 tgtaaataat ttactccaaa aagctggtca tcatatggaa cattccctga aaggcagtta 5581 cacggcaata ttaattggac atttaattac cgacaatgaa gaatatgaag caattgtacg 5641 gtctcatgtt aagggcaatt gtttcaagga gattataagc gttttagaga aatactacaa 5701 ctttatgaat ttaacagcca gtgccgaagc ttcggtggta gcacacataa aatcgacaca 5761 aaaattattg gaatatttca aaaaacgcga tcttttgcat gaggatgcaa ggccgttcac 5821 acgaaacgat acagattata ctgatgcggt gccgcttaac ttggaaacac atcatcatcg 5881 gcaaaatgat gagctagcca atacatcggc ggctaatagt ggtacatcat ccacgcagcg 5941 tgtttacaag acctacagtc aaagataaga ataattgagc aacacataga aaaagttgaa 6001 cccgtaaaat tgcaactttg ttttgttttt aatttaaaaa tttaattaat agcatattta 6061 aggtatattt ttaatacttt ttgttttaga aaaagaaaca atgtgtaata tttcgtttta 6121 aa