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LOCUS XM_013263494 6135 bp mRNA linear INV 02-SEP-2023 (LOC106096001), transcript variant X2, mRNA. ACCESSION XM_013263494 VERSION XM_013263494.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263494.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6135 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6135 /gene="LOC106096001" /note="protein wings apart-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106096001" CDS 750..5981 /gene="LOC106096001" /codon_start=1 /product="protein wings apart-like" /protein_id="XP_013118948.2" /db_xref="GeneID:106096001" /translation="MSRWGKHIVVPLETSKESTNRPTVARSLGTMGKWGKMGFTSTRT YTMSALPAVVAAAAAAVAAASPQESPASHKEDDQSVSVLEPPKPRKFFKSRNTTPPEV IAQIIQQIPRTPASPTRDSSGTSTMPSFLSTPVREPIKMKIPKSNSAERKKKAPKKTS KKTGTNTTTEGTTETTGDHEADDKPPPEPKSTKKKKEKELKPEAPPSRILGRARKAVN YCEDDYDDRNPTPIKDIVVPKQKKAEKVISVQETPPPTPAHKVDDVYASCDTPEPVLP PPAAPQQPPLIVHQPQAIVNSAASKTPEHPPIVLRISKGTSRLVSTDSEEQQPNASSS TPPSETTAANITLTETPQSSLTLSIAKSRQASVEDSSTPAIITTPKIIVKPLRPPSPV LHPAAVSNQQDEEAEESGEEEEEEEEDEEEAEPEPEPPEINYCTVKISPDKPPKERLK LIIKTDVIRNAIAAAAAAEAKAKAKKELLEASGRSGNEGKSKKNKKRKHLKHAAVEQL TPQQGSSSEFKIPSPHPALGNSNTIHDQLTTHHPPPSSMLHSAPSHSNVTASASRTVV SPAALSEKDFDSQSSVLGSISSKGNSTPLDIQPPPEESCVLHSRGSSVITSDLETSQH SSLVAPPSDIELRLESMMMDGESSQQQRTSATFVEAEPLQEDILAVLRGDETTTAMDV VAEEPQTEAIKENGLEKDNIENIETADDNAVATPVATRGRLTRGRPKPNNQPIANVEP LVQAPRTRGRKPAAVLQPSAIPAEEIPVAPIKRTTRRGKKFVEDTNSPIVMDDTPQAA IPEESSPNKSEEENNPVLAPAVTTRRGRIPRNANNLNNNNNNTNNNNNINKISTNITT KANNPPEAVTNHKLTPSETTTNATPASAAAASAQKSYGRKRKNQQATQVLQASTLQED IEDYSQPTPAKKSSLDLPSTEENLDTQITPMQPFNENRLTPSLDLQENNSLDSCSLPR PPSSLGGENPSLSPPLRDYKIKDKFKRTLTLDTQVNNTVVVKQTDAVSAPTNQQQQVE PVKLVISKKKGSIFKSRVPSEQTEHTGGGKRHLYKHRWDATANGDANSEDNAPATAAN KVSEPKNTNSTVEAIFNDFNSDETRSSPVPPIKMTRVIKPNPQAIPSAGSALDDPMAD SITSVKIDRKAKEYYTVVRNVKTAHQIQEIGEYQEMDDDVEYILDALQPHNPMSTRCL SALQLATKCMVPAFRMHVRAHGVVTKFFKALSDANRDLSLGLCTTAIMYILSQEGLNM DLDRDSLELMMLLLESEQTVAAPADHANYERNKQRVRELCEEIKVQGKATHLNVDSIT VGTLAMETLLSLTSKRAGDWFKEELRELGGLEHIIKTINDCCRPVIDNVYSETGINWT RPLLDNMQTVERCLRVLENVTQLNEENQQYILTYNKGSAATTLCSLYSLCNREIIMYP TSEFTSRDNPGIVIRELLIPLMKVLISLTHPFSPTNTLGAELVGQKADVIDTSLHLLL KAPNYIPDRCVFELSILSLLLLNNLTMYTLQNRKRIMQAGAPSDFNLSHDVTQQPPET AIAAVMAYFYRCEELARLVEKNTDAFLDKQDKNKKKQEEVDETVNNLLQKAGHHMEHS LKGSYTAILIGHLITDNEEYEAIVRSHVKGNCFKEIISVLEKYYNFMNLTASAEASVV AHIKSTQKLLEYFKKRDLLHEDARPFTRNDTDYTDAVPLNLETHHHRQNDELANTSAA NSGTSSTQRVYKTYSQR" polyA_site 6135 /gene="LOC106096001" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atacgtgcag agtccacata aaacataaat atttttaagt attttacaat aattgtagaa 61 tttttgcaac aaaattactt cgtaacgcaa atttcaatgc attatcttcc aagattacat 121 gttagttggc cgcgaaaata gtgaattgtt ggtaaaaaaa agaagtgaaa aatttggcca 181 aatggcctac gagatgaaaa cgtagaaaaa gaagtggcca ggcagtcagt atgtagtacg 241 tcgttgtgct gtccaccatt caattgttta aattaagtcc tgaggaggct tcatcctcag 301 gcagtatgcg tcgatttatg catatattcc aaaaatacat ttagaaaaag tgtaaaaatt 361 atgaaaaatc cagtggaaac catgggaaaa aattgcgcca ataagtaaaa gtgggaacaa 421 ccacatcaca cacatacaag caaaaatcag atgaaacttt gttttccttt agaaaaattt 481 ccaaaatttc tcaaaaaatc tcaactttat ccgaaccccc tatatatgcg atgagcataa 541 aacgaagaat gtatgtgttg gtcaaatgaa tttttaatga attcaaagtg aaaaatattc 601 ccaaaaaaaa acttgaaata tttgttgtcc ctagtaatgg gtacaaagat aattgtattt 661 ccaaaataat attcaaacta taaaataata acataaatag ccggatttgt gaaccacaac 721 aaacagaggg cattaataac tacagcaata tgtctcggtg gggcaaacat attgtggttc 781 ctttggaaac ctccaaagag agcacaaacc gtcccactgt ggctcgttct ctgggcacta 841 tgggtaaatg gggtaaaatg ggctttactt cgacacgcac ctacacaatg tctgccttgc 901 cggcagtagt agctgctgct gctgcggccg tagcagctgc cagcccacag gaaagtccag 961 catcgcataa ggaagacgat caatcggtgt cggttctgga accaccgaaa ccacgcaaat 1021 tcttcaaatc acgcaatacc acaccgcccg aagttatagc acaaatcata caacaaatcc 1081 cccgcacacc cgcatcgccc actcgcgaca gcagcggtac gtctactatg ccctcctttc 1141 taagcacacc cgtacgtgaa cccatcaaaa tgaaaatacc caaaagcaat tctgcagagc 1201 ggaaaaagaa agcacctaag aaaacttcca aaaagaccgg cactaacacc accaccgagg 1261 gcacaacgga aacaactgga gatcatgaag ccgacgacaa accgccaccc gaaccgaaat 1321 caacgaaaaa gaagaaagaa aaagagctta aaccagaggc gccaccttca cgtattttgg 1381 gcagagctcg caaagctgtc aactattgtg aggatgatta tgacgatcga aatcctacgc 1441 ccattaagga tattgtagtg ccgaaacaaa agaaggcgga aaaggtgatc agtgttcaag 1501 agacgccgcc accaacgcct gcacacaaag tcgatgatgt ttatgcatcg tgtgatacac 1561 cggaaccggt gttacctcca ccggcagcac cgcaacaacc accattaata gtacatcagc 1621 cccaagcaat tgtaaatagt gcagcttcca aaacgcccga acatcctccc attgtactaa 1681 gaatatcaaa gggtacctca cgcttagtca gtactgatag tgaagaacaa caaccgaatg 1741 cttcctcatc aacgccgcca tccgaaacaa cagctgctaa cataacgctc acagagacgc 1801 cacagtcttc attgacgttg tctatagcga aatctcgaca agcctccgta gaagattcct 1861 caacacccgc cattattaca acgccgaaga ttattgtgaa acctttgagg ccaccttcac 1921 ctgtattaca tccagctgca gtctccaacc aacaggacga ggaagccgaa gaaagtggtg 1981 aagaggagga ggaggaagaa gaggacgagg aagaagctga accagagccg gaaccaccag 2041 aaataaacta ttgcactgtt aaaatatctc cagataagcc accaaaagaa cgcttgaagt 2101 tgattatcaa aacagatgtt atccgaaatg ccatagcagc ggcggccgca gccgaagcaa 2161 aggcgaaagc aaaaaaggag cttcttgaag cctctggacg ttctggtaat gagggaaaat 2221 ctaaaaagaa taaaaaacgc aaacatttaa aacacgctgc ggttgaacaa cttacgccac 2281 aacaaggatc atcaagtgaa tttaaaatcc cttcgccaca tcccgctcta ggcaatagta 2341 atactataca tgatcaactc acgacacatc acccgcctcc ttcatctatg ctgcattcag 2401 ctccctcaca ctcaaatgta actgcatccg cctctagaac cgtagtatct cctgcagctt 2461 tatccgaaaa agatttcgac tctcaatcat ctgttctggg gagtatatcg tcaaaaggca 2521 atagtacgcc gttagacata caaccgcctc cggaagaaag ttgtgtttta catagtagag 2581 gctctagtgt gataacaagt gaccttgaga caagccagca ctcatcgctg gtggcgcctc 2641 cctcggacat tgaattaaga ctggagtcca tgatgatgga tggggaaagt agtcaacagc 2701 aacgaacctc tgctactttt gttgaagccg aacctttgca agaggacata ttggctgtac 2761 tgagaggtga tgaaacaaca acagccatgg atgtagtagc ggaagagcca caaacagagg 2821 ctataaaaga aaacggctta gagaaagaca atatcgaaaa catagaaaca gcggatgata 2881 atgctgttgc tactcccgtc gccacaaggg gtcgcctaac aagaggacgg cccaaaccca 2941 acaaccaacc catagccaac gtcgaacctc tagtacaagc gccgagaacg cgaggacgca 3001 agccagctgc tgttttacag ccctctgcca ttcccgctga ggaaattcct gtcgctccca 3061 ttaaacgcac aacacgaaga ggaaagaagt ttgtagagga caccaattca ccgatcgtta 3121 tggatgacac acctcaagcg gcaattccag aggaatcatc tccaaataaa tcagaggaag 3181 aaaataatcc tgtcttggcc ccggcggtta ccacaagaag aggcagaata ccacgcaatg 3241 ccaacaacct taataataac aacaataata ccaacaataa taacaatatt aacaaaattt 3301 cgacaaacat tacgactaaa gccaataacc cgccggaagc agttaccaac cataagctta 3361 cacctagcga gacaacgacg aatgccacgc ccgcatcagc ggcagccgct agcgcacaaa 3421 aaagctatgg tcgcaaacga aagaatcagc aagcaacaca agtgttgcaa gcaagtaccc 3481 tacaggaaga cattgaagac tactcacaac ccacacccgc caaaaagtct agccttgatt 3541 tgccctctac agaggaaaat ctcgacactc aaattacacc tatgcagcca ttcaacgaga 3601 atcgactcac accctctttg gatctgcagg agaataattc gctggattct tgttccttac 3661 cgcgaccgcc tagcagctta ggcggcgaaa atccgtcgct ttcaccacct ctgagagact 3721 acaagataaa ggataaattc aagcgtacct taacccttga cactcaagtc aataacacag 3781 tggtggtaaa gcaaaccgat gccgtatccg cccccacaaa tcaacaacag caggtcgaac 3841 ctgtcaagtt agttatctcc aaaaagaagg gtagcatctt taagagtaga gtaccatcag 3901 agcaaactga acacacggga ggaggtaaaa gacatttgta taagcaccga tgggatgcaa 3961 cagccaatgg cgatgcaaac agcgaagaca atgcgcccgc cacagctgcc aacaaagttt 4021 ccgagcccaa gaacacaaat tctacagtgg aagccatctt taatgacttc aatagcgatg 4081 aaactcgcag cagtcctgta cctcccatta aaatgacaag ggtcattaaa ccaaaccctc 4141 aagcaattcc ttcagcggga tctgcgctgg acgaccccat ggctgattca attacgtcgg 4201 tgaaaattga tagaaaagcg aaagaatatt acacagtggt gcgtaacgtc aaaacagccc 4261 atcaaatcca agaaatcgga gaatatcaag aaatggatga tgacgttgag tatattctgg 4321 atgctttgca accccacaat cccatgtcca ctcgttgcct gtcagccctg caattagcca 4381 ccaaatgtat ggttcctgct ttccgtatgc atgttcgggc gcacggtgtt gtaactaaat 4441 tcttcaaagc cctctctgat gcaaatcgtg atctctcact gggactgtgt actacagcaa 4501 ttatgtacat tttgtctcaa gaaggtttaa atatggattt ggatagggat tcgctggagc 4561 taatgatgct gctgctagaa tccgaacaaa cggtagcagc gccagcagat catgccaact 4621 acgagagaaa caaacaaaga gtaagagaac tgtgtgagga aatcaaagtc cagggcaaag 4681 caacacattt aaatgttgac tcgatcaccg tgggtaccct agccatggaa acgttgctat 4741 ctcttacttc caaacgggcg ggggattggt tcaaagagga actgcgagaa ttgggcggtc 4801 tggagcacat tataaaaact atcaacgatt gctgtcgtcc ggtcattgac aatgtgtaca 4861 gtgagacggg cattaattgg acgcgacctc ttttagataa tatgcaaacc gtggaacggt 4921 gcctgcgtgt tttggaaaat gtcactcaat taaatgaaga aaatcaacag tacatactca 4981 catataacaa gggttcggcc gcaacgacgt tatgttccct gtattccctc tgtaatcgtg 5041 agataataat gtatccaaca tcagagttta catcacgaga caatccgggc attgttatac 5101 gagaattgtt gattcctctt atgaaagtgc tcatcagttt aacgcatccg tttagtccga 5161 cgaacacatt aggtgccgaa ttggtggggc aaaaggctga tgttatcgat acaagtctcc 5221 atttgctatt gaaggcaccc aactacattc cggatcgctg tgtctttgaa cttagtatat 5281 tgtccctttt actgctgaac aatctaacaa tgtacacctt gcaaaatcgt aaacgcatta 5341 tgcaagctgg agctccttcc gactttaatt taagccatga tgtcacgcag caaccgccgg 5401 aaaccgcaat agcagctgta atggcttact tctatagatg tgaagaacta gcacgattgg 5461 tggaaaagaa cactgatgcc tttctggata aacaggataa gaataaaaag aagcaagaag 5521 aagttgatga gactgtaaat aatttactcc aaaaagctgg tcatcatatg gaacattccc 5581 tgaaaggcag ttacacggca atattaattg gacatttaat taccgacaat gaagaatatg 5641 aagcaattgt acggtctcat gttaagggca attgtttcaa ggagattata agcgttttag 5701 agaaatacta caactttatg aatttaacag ccagtgccga agcttcggtg gtagcacaca 5761 taaaatcgac acaaaaatta ttggaatatt tcaaaaaacg cgatcttttg catgaggatg 5821 caaggccgtt cacacgaaac gatacagatt atactgatgc ggtgccgctt aacttggaaa 5881 cacatcatca tcggcaaaat gatgagctag ccaatacatc ggcggctaat agtggtacat 5941 catccacgca gcgtgtttac aagacctaca gtcaaagata agaataattg agcaacacat 6001 agaaaaagtt gaacccgtaa aattgcaact ttgttttgtt tttaatttaa aaatttaatt 6061 aatagcatat ttaaggtata tttttaatac tttttgtttt agaaaaagaa acaatgtgta 6121 atatttcgtt ttaaa