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LOCUS XM_013263486 3852 bp mRNA linear INV 02-SEP-2023 (LOC106095997), transcript variant X4, mRNA. ACCESSION XM_013263486 VERSION XM_013263486.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263486.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3852 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3852 /gene="LOC106095997" /note="AP-1 complex subunit gamma-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106095997" CDS 689..3499 /gene="LOC106095997" /codon_start=1 /product="AP-1 complex subunit gamma-1 isoform X3" /protein_id="XP_013118940.2" /db_xref="GeneID:106095997" /translation="MNSEHGFNPAFNMATIRQAFSEAVERVRMPTPTRLRDLIRQIRA ARTAAEERAVVNKECAYIRTTFREEDPVWRCRNIAKLLYIHMLGYPAHFGQLECLKLT ASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLALCTLGAIASP EMARDLASEVERLMKSPNTYIRKKAILCAFRVIRRVPELMEIFLPATRSLLSEKNHGI LITGVTLITEMCENSADTLMHFKKDSGNREIVPNLVRILKNLILGGYSPEHDVSGVSD PFLQVKILRLLRILGHNDTDASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIR SEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPD VSIRKRAMELSFALINGQNIRTMTKELLLFLEKADPEFKAQCSSGMILAAERYSPNTR WHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPAIEQTYITTRFWESLQVANHCEDKQ PLLQVAVWAIGEYGDMFMYSANDDDFERPSESELIAMYHKFLTSAQVSTTSKQYALVS LAKLSTRLQSCVEEIQALITSFGSHLNVDLQQRGVEFSQLFGSYKHLRPPLLEKMPAM QVSRMSSQNGESSGSYDDQSPDLIENGLGDDQIVTESNMNTMSDNTNILLDLLGGSDL TTPTQDLSVQKKNTLNANNDTTTTSNNQDFLDLLGLDMSSTQSSTAANVTSNVVSTAN MNNVLMGSAGVGGGGGGGGGLLGDLGNIIPTTATAPTNGNDLSSIRAAASINMPSLDL ATANSLVNDPLANTAASNNVSVPQGPKLTALNKNGVLVQLVPVKMNDSMQIYMTTTNS STTTLEQYLFQAAVPKSFTLQMLSPSGSVLAPGGVITQEMRVVSTSNATLRMRIRISY VADGVNVLEQTEVSGFPDTTPE" polyA_site 3852 /gene="LOC106095997" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tagagcgagc gagcgcgagg aaaagaggaa gaaaaaaatt attcgttcgt aaatggaatc 61 ggaatctgaa aattacacca tttaaccatt tatttacttt tattttgttt aaaacatatg 121 caaaagtaaa atacagtgcg tgtgaaaatc gtggcaaaca aaagttttaa aataaaaata 181 tcccaacgtt gtgcaaaaga taaaaagaag tgacaaattg gaaaattgat tgagtcaaaa 241 ggcaagcaaa gaagaggggg agtgaaagaa attgtcgcgt tgttaaaaaa aggttggcca 301 agaagaaaaa aacggttgta attgttgtgc accgcccgat gtcttagaga gagaggccta 361 tgtgtacttc tactactcgt cgttattgtt gttatttttg tacatcatta cacacagatg 421 aattacacgt aaataaaata agaattataa caaaaacaac aaaaataagg ccagaagtca 481 agccgctgga aagtggcaac aaaagcagca aaaccaccta aacgtaaata gttcagtgat 541 tcatatttat tagtaaacgc cgaacggccg atcatctcgt cgtcattggt taacttcatt 601 attattgtta tcgtcatcgt catcatcatc aacttcaaca tcagcaacca ttcatcgctg 661 cggaaactga aaaaaacaca agctcaacat gaattccgag cacggattca atccggcctt 721 taatatggcc acaatacggc aagccttctc tgaggctgtg gaaagagtga ggatgccgac 781 acctacacgt ttaagagatc tcataagaca gatacgtgca gctcgcacag ctgcagagga 841 acgtgctgtt gttaataaag aatgtgccta catacgcacc acttttcgtg aagaggatcc 901 agtatggagg tgtcgaaata ttgccaaatt actgtacata cacatgctgg gctacccggc 961 gcattttggc caattggaat gtttgaaact taccgccagc acacgtttta ccgataaacg 1021 gattggttac ctgggagcca tgctattgtt ggatgaacgt caagatgttc atttgctcat 1081 aacaaattgc ttaaagaatg atttaaacag ttcaacacaa tttgttgtgg gattggcttt 1141 atgcacactg ggtgctattg cctcacctga aatggcacgt gatttggcca gcgaggtgga 1201 acgtctcatg aaatcaccaa acacatacat tcgcaaaaaa gcaattcttt gcgcctttcg 1261 tgttattcga cgtgtacccg aattaatgga aattttctta ccggccacac gctcgctgtt 1321 gagtgaaaag aatcatggta ttttaattac tggcgtcaca ttaattacgg aaatgtgtga 1381 aaatagtgcc gacacgttaa tgcattttaa aaaggatagc ggaaatcgag agattgtgcc 1441 gaatttagtt cgcatcttga aaaacctcat attgggaggt tattcgcccg aacatgatgt 1501 aagcggcgta agcgatccat ttttacaagt gaaaatttta cgtctgttac gcatattggg 1561 tcacaatgac acggatgcct cggaggccat gaacgatata ctggcacagg tggccacaaa 1621 tacggagacg agtaaaaatg tcggcaatac catattgtat gagactgttt tgtcaataat 1681 ggatatacga tcggaaggtg gcttacgtgt tttggctgta aatattttgg gccgattcct 1741 attgaactcg gacaaaaata tacgttatgt ggctttgaat acacttttgc gtacagtaca 1801 tgcagatacg tccgctgtac agcgacatcg tactacaatt ttggagtgcc tcaaagatcc 1861 tgatgtgtcg atacgaaaac gtgctatgga attgtcattt gctttgataa atggccaaaa 1921 tatacgcacg atgacaaagg agcttttgtt attcttggaa aaagctgatc ccgaattcaa 1981 ggctcaatgt agttcgggta tgatattggc ggcggaacgt tattcgccaa atacaagatg 2041 gcatctggac acacaattaa gtgtcttaat agcggctggt aattatgtac gtgatgatgt 2101 cgtttcgtcg acaatacagc ttgtctccag cagtccagcg attgagcaaa cctatataac 2161 cacacgcttt tgggaatctt tacaagtggc caatcattgt gaagataaac agccattatt 2221 acaggtggcc gtttgggcca ttggtgaata tggtgatatg tttatgtata gcgcaaatga 2281 tgatgatttt gaacgtccat cagaaagtga attgattgca atgtatcata aatttttaac 2341 atctgctcaa gtttcaacca ccagtaagca atatgcttta gtgtcattag ccaagctaag 2401 cacccgactc cagagttgtg tagaagaaat tcaagcatta attacctcat ttggcagcca 2461 tttaaatgtg gatttacagc aaagaggtgt agagttctct caactatttg gctcatataa 2521 acatttgcgt ccacctctac tggagaaaat gccagcaatg caagttagtc gcatgtcctc 2581 acaaaacggc gagagcagcg gttcatatga tgatcaaagt cctgatctaa ttgaaaatgg 2641 tttgggtgac gatcaaatcg tcactgaaag caatatgaat accatgagtg ataacactaa 2701 tatcctttta gatctattgg gtggatcaga tttaacaaca ccaacacaag atttatctgt 2761 acaaaagaaa aatacgctca acgccaacaa tgataccaca acaacatcga ataatcaaga 2821 tttccttgat ttactcggtt tggacatgtc ttcgactcaa tcatccacag cagcgaatgt 2881 tacctccaat gttgtcagca ctgccaacat gaacaatgtg ctgatgggca gtgcaggtgt 2941 tggtggtggt ggtggtggtg gcggcggtct tttgggtgat ttgggtaata tcattccaac 3001 gacagccacc gcgcctacaa atggcaatga tctgtcatca attagggctg ccgctagtat 3061 aaatatgcct tcgttggacc tagccacagc gaattctctc gtcaatgatc ccctagctaa 3121 tacagcagct tcaaataatg ttagtgtgcc tcaaggtccg aagttgacag ctctgaacaa 3181 gaatggtgtt ttggttcaat tagtcccagt taagatgaat gatagtatgc aaatatatat 3241 gaccactacg aatagttcaa caacaacgtt ggaacaatat ctatttcagg cggcagttcc 3301 taaaagtttt acattgcaaa tgctatcgcc ttccggctct gtactagcac cagggggtgt 3361 tataacgcaa gaaatgcgcg ttgtcagtac atcaaatgct actctacgca tgcgcatacg 3421 catatcatat gtcgccgatg gagtgaatgt tttagagcaa acagaagtaa gtggttttcc 3481 cgacacaacc cccgaataga acttagttta ggatgagcaa ttattttaat aaatgcaagg 3541 aagcaaaata acataacgct aaatactaaa acataaacaa aagataatgc agtataatat 3601 taatataaaa ataatactta ataattaaac attaccatac acaataataa taataataaa 3661 aataaaacaa aaccaatagt gatgataaca tgaaacgtta acgtaaaaat aatttagcaa 3721 aaaatcaaac actcacatta agaacaggta aagaaattta acaagaagaa aaatcatcca 3781 agaacaagga aataacgatc gtatatactg aagaaaagaa aaactccctc ccttttgcga 3841 tacaaaaata aa