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LOCUS XM_013263485 3829 bp mRNA linear INV 02-SEP-2023 (LOC106095997), transcript variant X3, mRNA. ACCESSION XM_013263485 VERSION XM_013263485.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263485.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3829 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3829 /gene="LOC106095997" /note="AP-1 complex subunit gamma-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106095997" CDS 666..3476 /gene="LOC106095997" /codon_start=1 /product="AP-1 complex subunit gamma-1 isoform X3" /protein_id="XP_013118939.2" /db_xref="GeneID:106095997" /translation="MNSEHGFNPAFNMATIRQAFSEAVERVRMPTPTRLRDLIRQIRA ARTAAEERAVVNKECAYIRTTFREEDPVWRCRNIAKLLYIHMLGYPAHFGQLECLKLT ASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVVGLALCTLGAIASP EMARDLASEVERLMKSPNTYIRKKAILCAFRVIRRVPELMEIFLPATRSLLSEKNHGI LITGVTLITEMCENSADTLMHFKKDSGNREIVPNLVRILKNLILGGYSPEHDVSGVSD PFLQVKILRLLRILGHNDTDASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIR SEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPD VSIRKRAMELSFALINGQNIRTMTKELLLFLEKADPEFKAQCSSGMILAAERYSPNTR WHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPAIEQTYITTRFWESLQVANHCEDKQ PLLQVAVWAIGEYGDMFMYSANDDDFERPSESELIAMYHKFLTSAQVSTTSKQYALVS LAKLSTRLQSCVEEIQALITSFGSHLNVDLQQRGVEFSQLFGSYKHLRPPLLEKMPAM QVSRMSSQNGESSGSYDDQSPDLIENGLGDDQIVTESNMNTMSDNTNILLDLLGGSDL TTPTQDLSVQKKNTLNANNDTTTTSNNQDFLDLLGLDMSSTQSSTAANVTSNVVSTAN MNNVLMGSAGVGGGGGGGGGLLGDLGNIIPTTATAPTNGNDLSSIRAAASINMPSLDL ATANSLVNDPLANTAASNNVSVPQGPKLTALNKNGVLVQLVPVKMNDSMQIYMTTTNS STTTLEQYLFQAAVPKSFTLQMLSPSGSVLAPGGVITQEMRVVSTSNATLRMRIRISY VADGVNVLEQTEVSGFPDTTPE" polyA_site 3829 /gene="LOC106095997" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tagagcgagc gagcgcgagg aaaagaggaa gaaaaaaatt attcgttcgt aaatggaatc 61 ggaatctgaa aattacacca tttaaccatt tatttacttt tattttgttt aaaacatatg 121 caaaagtaaa atacagtgcg tgtgaaaatc gtggcaaaca aaagttttaa aataaaaata 181 tcccaacgtt gtgcaaaaga taaaaagaag tgacaaattg gaaaattgat tgagtcaaaa 241 ggcaagcaaa gaagaggggg agtgaaagaa attgtcgcgt tgttaaaaaa agttgtaatt 301 gttgtgcacc gcccgatgtc ttagagagag aggcctatgt gtacttctac tactcgtcgt 361 tattgttgtt atttttgtac atcattacac acagatgaat tacacgtaaa taaaataaga 421 attataacaa aaacaacaaa aataaggcca gaagtcaagc cgctggaaag tggcaacaaa 481 agcagcaaaa ccacctaaac gtaaatagtt cagtgattca tatttattag taaacgccga 541 acggccgatc atctcgtcgt cattggttaa cttcattatt attgttatcg tcatcgtcat 601 catcatcaac ttcaacatca gcaaccattc atcgctgcgg aaactgaaaa aaacacaagc 661 tcaacatgaa ttccgagcac ggattcaatc cggcctttaa tatggccaca atacggcaag 721 ccttctctga ggctgtggaa agagtgagga tgccgacacc tacacgttta agagatctca 781 taagacagat acgtgcagct cgcacagctg cagaggaacg tgctgttgtt aataaagaat 841 gtgcctacat acgcaccact tttcgtgaag aggatccagt atggaggtgt cgaaatattg 901 ccaaattact gtacatacac atgctgggct acccggcgca ttttggccaa ttggaatgtt 961 tgaaacttac cgccagcaca cgttttaccg ataaacggat tggttacctg ggagccatgc 1021 tattgttgga tgaacgtcaa gatgttcatt tgctcataac aaattgctta aagaatgatt 1081 taaacagttc aacacaattt gttgtgggat tggctttatg cacactgggt gctattgcct 1141 cacctgaaat ggcacgtgat ttggccagcg aggtggaacg tctcatgaaa tcaccaaaca 1201 catacattcg caaaaaagca attctttgcg cctttcgtgt tattcgacgt gtacccgaat 1261 taatggaaat tttcttaccg gccacacgct cgctgttgag tgaaaagaat catggtattt 1321 taattactgg cgtcacatta attacggaaa tgtgtgaaaa tagtgccgac acgttaatgc 1381 attttaaaaa ggatagcgga aatcgagaga ttgtgccgaa tttagttcgc atcttgaaaa 1441 acctcatatt gggaggttat tcgcccgaac atgatgtaag cggcgtaagc gatccatttt 1501 tacaagtgaa aattttacgt ctgttacgca tattgggtca caatgacacg gatgcctcgg 1561 aggccatgaa cgatatactg gcacaggtgg ccacaaatac ggagacgagt aaaaatgtcg 1621 gcaataccat attgtatgag actgttttgt caataatgga tatacgatcg gaaggtggct 1681 tacgtgtttt ggctgtaaat attttgggcc gattcctatt gaactcggac aaaaatatac 1741 gttatgtggc tttgaataca cttttgcgta cagtacatgc agatacgtcc gctgtacagc 1801 gacatcgtac tacaattttg gagtgcctca aagatcctga tgtgtcgata cgaaaacgtg 1861 ctatggaatt gtcatttgct ttgataaatg gccaaaatat acgcacgatg acaaaggagc 1921 ttttgttatt cttggaaaaa gctgatcccg aattcaaggc tcaatgtagt tcgggtatga 1981 tattggcggc ggaacgttat tcgccaaata caagatggca tctggacaca caattaagtg 2041 tcttaatagc ggctggtaat tatgtacgtg atgatgtcgt ttcgtcgaca atacagcttg 2101 tctccagcag tccagcgatt gagcaaacct atataaccac acgcttttgg gaatctttac 2161 aagtggccaa tcattgtgaa gataaacagc cattattaca ggtggccgtt tgggccattg 2221 gtgaatatgg tgatatgttt atgtatagcg caaatgatga tgattttgaa cgtccatcag 2281 aaagtgaatt gattgcaatg tatcataaat ttttaacatc tgctcaagtt tcaaccacca 2341 gtaagcaata tgctttagtg tcattagcca agctaagcac ccgactccag agttgtgtag 2401 aagaaattca agcattaatt acctcatttg gcagccattt aaatgtggat ttacagcaaa 2461 gaggtgtaga gttctctcaa ctatttggct catataaaca tttgcgtcca cctctactgg 2521 agaaaatgcc agcaatgcaa gttagtcgca tgtcctcaca aaacggcgag agcagcggtt 2581 catatgatga tcaaagtcct gatctaattg aaaatggttt gggtgacgat caaatcgtca 2641 ctgaaagcaa tatgaatacc atgagtgata acactaatat ccttttagat ctattgggtg 2701 gatcagattt aacaacacca acacaagatt tatctgtaca aaagaaaaat acgctcaacg 2761 ccaacaatga taccacaaca acatcgaata atcaagattt ccttgattta ctcggtttgg 2821 acatgtcttc gactcaatca tccacagcag cgaatgttac ctccaatgtt gtcagcactg 2881 ccaacatgaa caatgtgctg atgggcagtg caggtgttgg tggtggtggt ggtggtggcg 2941 gcggtctttt gggtgatttg ggtaatatca ttccaacgac agccaccgcg cctacaaatg 3001 gcaatgatct gtcatcaatt agggctgccg ctagtataaa tatgccttcg ttggacctag 3061 ccacagcgaa ttctctcgtc aatgatcccc tagctaatac agcagcttca aataatgtta 3121 gtgtgcctca aggtccgaag ttgacagctc tgaacaagaa tggtgttttg gttcaattag 3181 tcccagttaa gatgaatgat agtatgcaaa tatatatgac cactacgaat agttcaacaa 3241 caacgttgga acaatatcta tttcaggcgg cagttcctaa aagttttaca ttgcaaatgc 3301 tatcgccttc cggctctgta ctagcaccag ggggtgttat aacgcaagaa atgcgcgttg 3361 tcagtacatc aaatgctact ctacgcatgc gcatacgcat atcatatgtc gccgatggag 3421 tgaatgtttt agagcaaaca gaagtaagtg gttttcccga cacaaccccc gaatagaact 3481 tagtttagga tgagcaatta ttttaataaa tgcaaggaag caaaataaca taacgctaaa 3541 tactaaaaca taaacaaaag ataatgcagt ataatattaa tataaaaata atacttaata 3601 attaaacatt accatacaca ataataataa taataaaaat aaaacaaaac caatagtgat 3661 gataacatga aacgttaacg taaaaataat ttagcaaaaa atcaaacact cacattaaga 3721 acaggtaaag aaatttaaca agaagaaaaa tcatccaaga acaaggaaat aacgatcgta 3781 tatactgaag aaaagaaaaa ctccctccct tttgcgatac aaaaataaa