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LOCUS XM_013263454 7572 bp mRNA linear INV 02-SEP-2023 type A subunit alpha-1 (LOC106095970), transcript variant X6, mRNA. ACCESSION XM_013263454 VERSION XM_013263454.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013263454.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7572 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7572 /gene="LOC106095970" /note="voltage-dependent calcium channel type A subunit alpha-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:106095970" CDS 2086..7572 /gene="LOC106095970" /codon_start=1 /product="voltage-dependent calcium channel type A subunit alpha-1 isoform X6" /protein_id="XP_013118908.1" /db_xref="GeneID:106095970" /translation="MGGPKKEETPPGGGPTSLFILTEDNPIRKYTRFIIEWPPFEYTV LLTIIANCVVLALEEHLPECDKTVLAQKLEKTETYFLCIFCVEASLKILALGLVLHKH SYLRNIWNIMDFFVVVTGFMTQFPQLGPEVDLRTLRAIRVLRPLKLVSGIPSLQVVLK SIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDPNKPVKEGESETPC NTDNATDKSGGSYVCNYTTSMCLEKWDGPNSGITSFDNIGFAMLTVFQCITMEGWTAI LYWTNDALGSTFNWIYFVPLIVIGSFFMLNLVLGVLSGEFSNERNRVERRMEFQKCRF KTMFQTAMVSYLDWITQAEEVILAEERTTEEERMHIMEARRRNAAKRKKLKSLGKSKS TDTEEEEGEEDYGDDGYLKTRSKPQGSCVGFWRIEKSFRYWIRKTVKKQWFYWFVIVL VFLNTVCVAVEHYGQPPYLSDFLYYAEFVFLGLFMSEMFIKMYAMSPRIYFESSFNRF DCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRS IISLLFLLFLFILIFALLGMQLFGGQFNFSTETPETNFNTFPIALLTVFQILTGEDWN EVMYQGIISQGGAKRGMIYSVYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEEE QVEEDKEKQLQELEKEMEALQGDGVHVENGGDGAAAVKAKSKKKEEEKKEEEEVTEGP KPMLPYSSMFILSPTNPIRRGAHWVVNLRYFDFFIMVVISLSSIALAAEDPVRENSPR NKILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFD MSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILF QFIFSVIGVQLFNGKFFYCTDESKHTAYECQGSYFKFEEGEILPKQEARMWKAQSFHY DNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFF FVNIFVALIIITFQEQGEAELQDGEIDKNQKSCIDFTIGARPLERYMPKNRNTFKYKV WRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGEMYEKSLKYINMGFTGMFSVETVLKI IGFGVKNFFKDPWNIFDLITVLGSIVDALWMEFGSNSINVGFLRLFRAARLIKLLRQG YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVENTITRHNNFQ SFVQGVMLLFRCATGEAWPNIMLACLKGRPCDEEAEKGDETCGSTLAYAYFVSFIFFC SFLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGRILYTEMYDML KNMDPPLGFGNKCPNRLAFKKLIRMNMPLDDELRVQFTTTLFALIRENLSIKMRAAEE MDQADSELRETIEKIWPLQAKKMLDLLVPPNDQLNKGKMTVGKIYTGLLLLEGYRIRR DGGGVQGGMPMLELRDAPRHPSQESLTGADAGHLHPGHAYQNGHRRSPSLRSPSPRRR GHPYTHHDIGFSDTVSNVVEMVKETRHPRGYGHHARYPRGSWSASTSPARSPSPSRYG GHTRRPELPYPAYGTTSLCQRSRSPSPARIQEMRERDRLGYGIDMGGPHGQHSYPNLN HRRGVGRRLPPTPSKPSTLQLKPTNINFPKLNASPTHTHHSTPHSVHSLVNHRDLIPD PRELYYSSRERERDRARYRDRLRDYDPRYEYRDRERELYERERDREMEFERERLEYIP PLSFEQAVAMGRTGRVLPSPVMNGYKPKGSHHARHSDSDEEDWC" misc_feature 2194..3057 /gene="LOC106095970" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3406..4116 /gene="LOC106095970" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 4390..5235 /gene="LOC106095970" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5365..6117 /gene="LOC106095970" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6142..6303 /gene="LOC106095970" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" misc_feature 6331..6567 /gene="LOC106095970" /note="Voltage gated calcium channel IQ domain; Region: Ca_chan_IQ; pfam08763" /db_xref="CDD:462591" ORIGIN 1 ttcgttgaaa ttttttcccc aaatggttag acaaaaatcg ttggtagctc tgtgaaaaat 61 ttaaaataaa ttggtttgct ttggaagaag tttgcatgcg aaaagcaaag tgtagagtga 121 aattttgcta aggaattata tatagaagtt ataaaaacat agcaaataaa agctgctgga 181 acaagagtgt gaaaattgcc aaacaacaaa aaatatttgg gaaaaaattc aaaaaaaaaa 241 ttaaacaaac ttttccaaag atctactact ttaagtgcat attaacaaat gccattgcaa 301 caattcatca ataaaagatc tgtgagggaa acccccttga agtgcctgta taggccttcg 361 taaactaaca acggtaacaa caaattcccc cagaatcgaa gagattctag ggaatttctt 421 tgtgggcgtc tgcatgaatc aaaccaacca acaccaacac atttttgtaa ataaattaac 481 aaaaacaaca agccaataaa caactaagac aacaacaaca actgcgtcat caattgccga 541 atgtaattga aaatactcat tgaaaaatcc tcatcgagtg aaaacacaaa aaaacacaca 601 tttttggaaa ttgaacatcc aaataatttc aacgtttcaa caacaaaccc aaaaaaaaaa 661 aaaaatatcc caaaaaattt aatctgtgat ttttgtgatt tattttaaaa attatttcct 721 ccgtcacact caaaaccaaa aagaaaatca atctcgaaac caaatgaaat tctgaattaa 781 gtcactcact aaaacataca aattctccac atcactgctg tgtaaatata atcattacaa 841 caacaacaac aacaaaacaa atacatgtat aaataaacca accaacacaa taacatctca 901 taatcaaaaa aagaaaaaaa aaacaaaaag gaaaatatta aggcaaaacg agttgaaata 961 aatttcaacg aaaaatccaa ataaaaaaca aacaaacgaa gcaaaaaaaa atatattcca 1021 gtaaaaccgc gtccagtaac cgcaaaagga ataaaacgac aaagcagcag aagaagagaa 1081 gacaaaaccg ataactaaac caaagtttaa cttgtagtta ccccacaaca gcaacaacta 1141 caataagaac cactacaaca actaccaaca ccaccacact tagagaagcg aatatttttt 1201 ctgcttaacc gcaaaagtag ctgaaaacct cacttcaacg ggggaaaaaa aaacaaagaa 1261 acgcaaggca aaatccgaaa tcgagaaacc caaatcccct acccttcgaa taacacaaag 1321 agagacgacg atccttatgc caactttaaa aagaagcatt tagcacttcg tcaacaccgt 1381 agtcgttctc gacatcgtca tcatcgtcgc tgtcgtcctt tacgcatttg tcttcgttgt 1441 cgtggtcgtc atcatcgtca tcattgccgt ttgttgatgt actcttattt cctgttatcc 1501 tgccacactg cttctggttc ttctactcgc aattgaagtt acactaacta ttagtgtagt 1561 aagcgagtga gtgagtgttt tggggtaatt gtcaccgttc cccctattat gtgtatgtgt 1621 gtttacgtgt gtatgtgaaa gcgtggtcga catccttgtc tccttaaaac aaggaacaaa 1681 aagtgttgtt tgcttaacac caatctagta gaagctctag agcaagcaga aaaagccgta 1741 acatagtgga gtaacttaat acaaaaacaa aaaagtagaa aaaaaaacca aaaaccccgg 1801 aaaaaagaaa ccccttcaaa aaaaaaccgt aaaggaaatt cattatctgt gtcatcgtcg 1861 tcgtcgattg catgccatgt gtatgacgtg tcaatctaca caaatgtgtg tggccgtaca 1921 tctggtgtaa cacaattatg gccgagcggt cgtcctatca atatcagaaa ttggatatac 1981 tgacggttgg cagcggctca ggaagcggcg ctagcagggc atcaacaggg ctccacaagc 2041 ggggggcact cgggtcgaag gggagcccat cgcttagctg atagaatggg tggcccaaag 2101 aaagaagaga caccacctgg tggtggtccc acatcattat ttatcctcac cgaggataat 2161 ccaattagaa aatacacacg tttcataata gaatggccgc ccttcgagta cactgtgtta 2221 ttgacaatca ttgccaactg cgttgtgttg gcattagaag aacatttgcc tgagtgtgat 2281 aaaacagtat tggcccaaaa gctggaaaaa acggagacct attttttatg cattttctgt 2341 gtagaagcat cgctcaagat ccttgcctta ggtctagttt tgcataaaca ctcctacctc 2401 aggaatattt ggaacatcat ggatttcttt gtagtagtga cgggattcat gacacaattc 2461 ccacaattag ggcccgaagt agatctaaga actcttaggg ccatacgtgt gctaaggccc 2521 ttaaaattag tctctggaat tcctagttta caagtagttt taaagtccat aataaaagca 2581 atggcaccgt tgctgcaaat cggtctcttg gtgttgtttg ccatcgttat atttgccatc 2641 attggactcg agttctattc gggtgcttta cataagactt gttatagttt agaagatcca 2701 aataagcctg taaaagaagg tgaatcagaa acaccgtgta atacggataa tgccacagat 2761 aaatcaggtg gttcatatgt atgtaattat acgacgagta tgtgtttgga aaaatgggat 2821 ggaccaaatt ctggcataac tagttttgac aatatcggtt ttgccatgtt gactgtattc 2881 caatgtatca ctatggaagg ctggacagca atactgtatt ggaccaacga tgctttaggt 2941 tcaacattta attggatata cttcgtgcct cttatagtta taggctcatt ttttatgctc 3001 aacttagttc ttggtgttct tagtggtgaa ttttccaatg aacgtaatcg cgtcgaacgt 3061 cgcatggaat ttcagaaatg tcgttttaaa accatgtttc aaacggccat ggtctcatat 3121 cttgattgga taacacaagc agaggaagtg atattagccg aagagcgtac aaccgaagag 3181 gagagaatgc acataatgga ggcacgaaga cgcaatgctg ccaaaagaaa aaaactgaaa 3241 agtctgggca agtccaagtc aacggatacc gaagaagagg agggtgaaga agattatggc 3301 gatgatggct acttaaaaac tcgttcaaaa cctcaaggaa gctgtgtggg tttctggcgt 3361 atagagaaaa gttttcgcta ttggatacgc aagaccgtaa agaagcaatg gttctattgg 3421 tttgtcatag ttctggtgtt cttgaataca gtgtgcgtag cagtggagca ctatggacaa 3481 ccgccgtatt tatctgattt tttatactat gctgaatttg tatttttggg ccttttcatg 3541 tcggagatgt tcatcaagat gtatgcgatg agccccagga tatatttcga atcgtcgttt 3601 aatcgtttcg attgtgtcgt cattagtggt tcgattttcg aagttatatg gtctgaagtt 3661 aagggtggct cattcggttt atccgttttg agagcgttac gtttgctgcg tatattcaaa 3721 gtgaccaaat actggtcatc actgcgaaat cttgtgattt cgctattgaa ctcgatgaga 3781 tccatcattt cattgttgtt cctgctcttc ttgttcatac tgatatttgc cctacttggc 3841 atgcaattgt ttggcgggca atttaatttt agtacggaaa cccccgaaac caatttcaac 3901 acatttccca tagccttact gactgtcttt caaattctga ccggtgaaga ttggaatgaa 3961 gttatgtatc agggtattat atcacaaggt ggcgctaaaa gaggaatgat ttactctgtt 4021 tactttatcg ttttggtact cttcggtaat tatacattgc taaacgtgtt cttggctatc 4081 gctgttgata atttagcaaa cgcccaagaa ttaactgctg ccgaagagga acaagtcgag 4141 gaagataaag agaaacaatt acaagaatta gaaaaagaaa tggaagcgct acaaggagac 4201 ggtgtccatg tggagaatgg cggcgatggc gctgccgcag ttaaagcgaa aagcaaaaag 4261 aaggaagaag aaaagaagga ggaggaagaa gttacggagg gtccaaaacc aatgttgcca 4321 tattcatcaa tgtttatatt atcaccaaca aatcccataa gacgtggcgc ccattgggtc 4381 gttaatttac gttactttga ttttttcatt atggtcgtca tctcattgtc atcgatagcg 4441 ttagcggctg aagatcccgt tcgtgagaat tcaccacgaa ataaaatttt gaattatttc 4501 gattatgcat ttaccggcgt attcacaata gaaatgttac tgaaaattgt agatttaggt 4561 gttatattac atcctggcag ctatttaaga gaattctgga atattatgga tgctgtggtc 4621 gttatatgcg ctgctgttag ttttggtttc gatatgagcg gtagcagtgc tggacaaaat 4681 ttatcaacaa tcaaatcgtt gcgtgtcctt cgtgtcctgc gaccattaaa aaccattaaa 4741 cgcgtaccca aattgaaagc cgtcttcgac tgcgtagtta attcattgaa aaatgttgtt 4801 aacattctaa tcgtgtacat attatttcaa tttatatttt ctgtcattgg tgtacaatta 4861 ttcaatggga aattttttta ttgtacggac gaaagtaaac atactgccta tgagtgccag 4921 ggttcgtatt ttaaattcga agaaggagaa atactgccaa agcaagaggc tcgcatgtgg 4981 aaggcgcaaa gttttcacta cgacaacgtt gcagctgcaa tgttgacact attcgcagta 5041 cagaccggcg aaggatggcc acaagtactg caacactcca tggctgccac ttacgaagat 5101 aggggtccaa tacaaaattt ccggattgaa atgtccatat tttatatcgt ttattttatc 5161 gtatttccat tcttctttgt aaacatattc gtggccttga ttatcattac tttccaagag 5221 caaggcgaag ctgagttaca agatggtgaa attgataaaa atcagaaatc atgtatagac 5281 tttacaatag gagcgcgacc attagaacgc tacatgccca aaaatcgtaa tacatttaaa 5341 tataaagtat ggcgtattgt cgtatcgaca cccttcgaat actttataat gatgcttatt 5401 gtgttcaata ctttattgct gatgatgaag tatcataatc aaggtgagat gtatgaaaaa 5461 tcgctgaaat atatcaacat gggatttacg gggatgttca gtgtagaaac tgtactgaag 5521 atcattggat tcggtgtaaa gaacttcttt aaagatccct ggaacatctt tgatctgatc 5581 accgtcttgg gcagtatagt cgatgcatta tggatggaat ttgggtcgaa ctcaatcaac 5641 gttggcttcc tgcgtttatt tcgtgcggcg cgtcttataa aactgctgcg tcaaggatac 5701 acgatacgta ttctgctgtg gacattcgta caatcattca aagcacttcc atatgtctgt 5761 cttttgatag ccatgttatt ttttatctat gccattattg gtatgcaggt attcggaaat 5821 atcaaactag ggacagtgga aaataccatt actaggcaca acaacttcca atcatttgta 5881 caaggtgtca tgctcctatt cagatgtgca acgggcgagg cgtggccgaa cattatgctg 5941 gcgtgcctta aggggaggcc atgcgatgaa gaagccgaaa agggtgacga aacatgtggc 6001 tccacattgg cctatgccta ttttgtatcg tttatattct tttgttcatt tctaatgttg 6061 aatttattcg tggctgttat tatggataat tttgattatc taacaagaga ttccagtata 6121 ttgggcgccc atcatttaga tgaatttgtt cggatatggg ctgaatatga tccaaatgcg 6181 actggtcgaa tactctatac ggaaatgtat gatatgttaa aaaatatgga tcctccattg 6241 gggttcggta acaaatgtcc caatcgcctc gccttcaaga aattaatacg tatgaatatg 6301 cccctggacg acgagctgag agtgcaattt acgacgacgt tgtttgcatt gattcgtgaa 6361 aatcttagta taaaaatgag agcggcggaa gaaatggacc aagccgattc tgaacttagg 6421 gaaactatag aaaaaatatg gccattgcaa gccaaaaaaa tgctggatct actggtgccg 6481 cccaatgatc aattgaacaa gggcaaaatg acagtgggta aaatctatac aggattgttg 6541 ttgctagaag gatatcgcat aagacgcgat ggcggcggtg tacaaggagg aatgccgatg 6601 ttggaattaa gggatgcacc caggcatcca tctcaggaat cattaaccgg tgccgatgct 6661 ggtcatttac atcctggaca cgcctaccaa aatggccatc gaagatcacc tagtttaaga 6721 tcaccaagtc ctcgacggcg tggccatcca tacacacatc atgatattgg gttctctgat 6781 actgtatcta atgtggtgga gatggtcaag gaaacccgtc atccaagagg atatggtcat 6841 catgcgcgtt atccaagagg ttcatggtca gcatcgacaa gtccggcccg ttcgccttca 6901 ccgtcacgtt atggtggcca caccagacgc cctgaactgc cttatcccgc atatgggaca 6961 acaagtctat gtcaaagatc acgatcaccg agtcctgcta gaatacagga gatgcgtgaa 7021 agagatagac ttggctatgg gattgatatg ggtggacccc atggccaaca tagttaccca 7081 aatttaaacc atcgccgtgg tgttggtaga cgactaccac cgacacccag taaaccatcg 7141 actttgcagc taaagccaac aaatattaat tttccaaaat taaatgcaag tccaacacat 7201 acacatcact caacacctca tagtgttcac tcgttggtaa accaccgcga tctaataccg 7261 gaccctagag agttgtatta tagcagtaga gaacgtgagc gtgatcgggc tcgttacagg 7321 gaccgcttac gtgactacga tccacgatat gaatatcgag atcgagagcg tgagctatat 7381 gaacgagaac gagatcgtga gatggagttt gaaagagaaa gactggaata cataccaccc 7441 ttgtcgtttg aacaagcggt tgctatgggc agaacgggga gagtgttacc ctcgccggta 7501 atgaatggct ataagccaaa gggcagccac catgcacgcc actccgattc cgatgaggag 7561 gactggtgct ag