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PREDICTED: Stomoxys calcitrans pleckstrin homology


LOCUS       XM_013262958            1818 bp    mRNA    linear   INV 02-SEP-2023
            domain-containing family F member 1 homolog (LOC106095670),
            transcript variant X1, mRNA.
ACCESSION   XM_013262958
VERSION     XM_013262958.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013262958.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1818
                     /gene="LOC106095670"
                     /note="pleckstrin homology domain-containing family F
                     member 1 homolog; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:106095670"
     CDS             504..1397
                     /gene="LOC106095670"
                     /codon_start=1
                     /product="pleckstrin homology domain-containing family F
                     member 1 homolog"
                     /protein_id="XP_013118412.2"
                     /db_xref="GeneID:106095670"
                     /translation="MVDRLVNSEANTRRIATVENCFGSSGVALAIPGRVLVGEGVLTK
                     MCRKRPKSRQFFLFNDILVYGNIVIGKKKYNKQHIMPLEEVSLENIDDCTQYRNGWLI
                     RTTTKSFVVCAATPTEKQEWMAHINKCVEDLLRKSGKKPVENHAAVWVPDAEANVCMH
                     CKKTQFTMIVRRHHCRNCGAVVCGPCSSKKFLLPQQSSKPQRVCSSCYDRLSKVVKQE
                     SAKMSSNSLNSSAHNDSQNNANESSGEDDSDDEGNGIGNEQHDEPKFYGDTSILSSTE
                     TNSAANTTNNTHVNSSHTPNN"
     polyA_site      1818
                     /gene="LOC106095670"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttcggtctg ttgcgcttct gtgtgccttt ttaatttgca tttttatttt tattaagttt
       61 aaagctgttt ttctttatcg agttagtttt aacggtgtca cttgaaaacg ttttataatt
      121 gtataatgaa aaactatcga aattgaattt aatactccta gtgaaatata aatagtttta
      181 ttttagaaaa atttaatata caaacaactg caaataagaa aaagtggaaa gcataaatga
      241 gaaatacgtg aaaatattcg ggcgaaactt gcaatcactt ccgttccaaa aagtaaaaaa
      301 aaaataataa aaacgacaaa caacaaaagg aaaataaaaa atacgtaaat tgactttttt
      361 catagcgaat gagagtagaa gatataattg aggaggttta attggaggaa tcccaaccag
      421 aagcgagaag caccagtgga aaaatatcgt cgtcgcgtta ataataaaag acaacagaaa
      481 ggccgtctgt ctaatcctct aaaatggttg accgtctggt gaattccgaa gcaaatacaa
      541 gacgtattgc cacagtggag aattgctttg gcagttctgg tgtggccctg gccatacccg
      601 gacgagtgct ggtgggtgag ggtgtcttaa ccaaaatgtg ccgcaaacgt cccaaatcga
      661 gacaattctt tctgttcaat gacatcttgg tctatggcaa tattgtcatt ggcaaaaaga
      721 aatacaacaa acaacacata atgcctttgg aagaggtttc attggagaac attgacgatt
      781 gtacccagta tcgaaatggt tggcttatac gtaccaccac caaatcgttt gtggtgtgtg
      841 cggccacgcc aacagagaaa caagaatgga tggcccatat taacaagtgt gtggaggatc
      901 tactaagaaa atcgggcaag aaacccgtgg agaatcatgc cgccgtatgg gtgcccgatg
      961 cagaggcaaa cgtatgcatg cattgcaaaa aaacacaatt cacaatgatt gtgcgacgtc
     1021 accattgtcg taattgtggc gcggttgttt gcgggccatg ctcatcgaag aaattcctat
     1081 tgccccaaca aagctcgaag ccacaacgtg tgtgttccag ctgctatgat cgtctgagta
     1141 aggttgttaa acaggaatca gctaaaatgt cgtcgaactc cttgaattcc tcggctcaca
     1201 acgattcgca aaataatgcc aacgaatcat ctggcgaaga tgattctgat gacgagggca
     1261 atggcatagg caatgaacag catgatgagc ccaaattcta tggcgacacc agtatcttat
     1321 cctcaacgga gacgaactct gccgccaaca ctaccaacaa tacccatgtg aattctagtc
     1381 atacacccaa caattgatat ttaaagaaat tgcgggaaag agccggcggg ggagggagaa
     1441 gcagtggtga cagcggcagt aattttggcg tcggaggtgg tggagatgac agttgggtat
     1501 gggtggtcag gaaagcaaaa tgatgaaaag aagtacagag tagagaatgg ctatcaatta
     1561 aaggaggatc atctaatggt gtataacgga cgaaatgtag caaacaaaag acgaattgat
     1621 gaatgaatga atggacgttt gacgttgcag ttgttataaa tatttctata tatagtttct
     1681 aatggaagag gttctatttt tagaacagat tgctctatct acaatatttt cacaaaaacc
     1741 cctgttaaca acgaaacaac aacaacaaca gcatgttatc tgttagcctg aaaactccca
     1801 taattttctt ttagaaaa