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LOCUS XM_013262953 1767 bp mRNA linear INV 02-SEP-2023 (LOC106095667), transcript variant X4, mRNA. ACCESSION XM_013262953 VERSION XM_013262953.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013262953.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1767 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1767 /gene="LOC106095667" /note="ras-related protein Rab-27A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106095667" CDS 784..1488 /gene="LOC106095667" /codon_start=1 /product="ras-related protein Rab-27A" /protein_id="XP_013118407.1" /db_xref="GeneID:106095667" /translation="MSLPNNIDYDYLMKFLALGDSGVGKTSFLYQYTDGRFHSQFIST VGIDFREKRLIYTSRGRNHRIHLQLWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEK SFLEITNWLEQLRQHAYSEDPDVVLCGNKCDLHDFRVVSHQQVTALAERYKLPYIETS ACTGYNVSAAVELLVGRVMERMENAIANAELTRLMSQTHLTNFKNINHHTLRMALLKG EPGSQNEEKCKQNCSC" misc_feature 808..1329 /gene="LOC106095667" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 838..861 /gene="LOC106095667" /note="G1 box; other site" /db_xref="CDD:206700" misc_feature order(844..864,1003..1005,1171..1176,1180..1182, 1261..1269) /gene="LOC106095667" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206700" misc_feature 913..915 /gene="LOC106095667" /note="G2 box; other site" /db_xref="CDD:206700" misc_feature 925..933 /gene="LOC106095667" /note="Switch I region; other site" /db_xref="CDD:206700" misc_feature 994..1005 /gene="LOC106095667" /note="G3 box; other site" /db_xref="CDD:206700" misc_feature order(1000..1005,1051..1056) /gene="LOC106095667" /note="Switch II region; other site" /db_xref="CDD:206700" misc_feature 1171..1182 /gene="LOC106095667" /note="G4 box; other site" /db_xref="CDD:206700" misc_feature 1261..1269 /gene="LOC106095667" /note="G5 box; other site" /db_xref="CDD:206700" ORIGIN 1 tcattcgcaa caggtcgctc gttactgttg ctctttgtgt gtgaggtcgc ttgcataaaa 61 attcgaaaga cattacggtc gttttgccta aaagaaagag ccaaacaaaa aaaattgtgt 121 caaagcattt ctttcaagtt tgcagacgta tcaatagatt ttacacacac cattattttc 181 caagtaattg cgggagttct ttttccgagt ttttgtggtg ttcagaagga aacacccccg 241 ttttaagagt ttgtttggtt ttcatttttc gaaactgcag cacgtacttg gcagcgggaa 301 agttactaca gggcaacatt cattaaaagc caggtataat ccctaaaaat taattaaaaa 361 caaaaagaca acatagcaac ttttgatact taccccaaat cgtcttggag atagcgatag 421 aaaattgagt gctgtagtgg gtgaaagatg aggtcttcaa aaagtaacag gtatcaaatt 481 tacttcaaat aagtggatac tgctctaaaa cagcaaccat cgccattatc attcattcat 541 tcaacatttg ggtgtaggaa tcgttgcgcc aaaaggacaa gcaacagttg ttggtgtttt 601 tgttaacggc aagagagaaa aggagaccgt taaaaagttt gttttacata tccatttgtg 661 gttgtcatcg gaaacggaaa tcccacagac gaatcatttt gcacagtcac atttgcagct 721 atactcccag tttcccaagt ccttagacct ctgcaccaac aacaacaaca cgaggacatc 781 agcatgtcat tgccaaacaa tattgattat gactacctaa tgaaatttct agcattgggt 841 gattcgggtg tgggaaagac gagctttctg tatcagtaca cagatggtcg gtttcattcg 901 cagttcatat caacagttgg catagatttc cgggagaaac gcttgattta cacatctcgc 961 ggccgtaatc atcgcattca cctgcaacta tgggataccg caggtcaaga gagatttcgc 1021 tcactcacca cagcattcta tcgcgatgcc atgggatttc tgctcatttt cgatctgacc 1081 agcgaaaagt cctttttgga aatcaccaat tggctagaac aattgcgaca gcatgcctac 1141 tccgaggacc ctgatgtggt gttgtgtggc aataaatgcg acttgcatga ctttcgtgtc 1201 gtttcacatc aacaggtcac tgctttggca gaacgttata aactgccata cattgagaca 1261 agcgcttgta ccggctacaa tgtaagtgcg gccgttgaac ttttggtggg tcgtgtcatg 1321 gaacgcatgg agaatgccat agccaatgct gagctaacac ggctaatgtc tcaaacacat 1381 ttgacaaatt tcaaaaatat taatcatcac accctgagga tggcgctgct aaagggcgaa 1441 cctggatcac agaatgagga aaaatgtaaa caaaactgta gctgttgagg ccatgagggg 1501 gcatgaaaaa aatatcgccc ttgggctttg ggtatttgga aattgttttg ttttttgtat 1561 ttatgggaca accagaacaa aagaacaaaa aactcaatta ttattcttca aaactgctgt 1621 tgggtacaat aaattttgtg agtgagttac catgagcatc aaatgttaaa gaaaaaaaat 1681 cagttttatg ttttttgtgc ttaaagtaat gttattatca ttattatgtt aagcagttgt 1741 ataatgctca actttttttt ataactc