Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans proteasome activator complex subunit


LOCUS       XM_013262923            1295 bp    mRNA    linear   INV 02-SEP-2023
            3 (LOC106095644), transcript variant X1, mRNA.
ACCESSION   XM_013262923
VERSION     XM_013262923.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013262923.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1295
                     /gene="LOC106095644"
                     /note="proteasome activator complex subunit 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:106095644"
     CDS             334..1101
                     /gene="LOC106095644"
                     /codon_start=1
                     /product="proteasome activator complex subunit 3 isoform
                     X1"
                     /protein_id="XP_013118377.1"
                     /db_xref="GeneID:106095644"
                     /translation="MPIDTTAKQVQEYKDTLIKKAEQLIIQGFPEKIVELNELLDTPM
                     FSERNFTEVHQDLNIPVPDPILVNNNGSEAAAAAADGGDADQPAAKRARTETPCGTKV
                     MYLASGSVPCNTPLCEMIKVVKPIIRKLVEDSNLLKMWISFMIPKIEDGNNFGVSIQE
                     DTLAEIQTVESEAAAFFDQISRYFLSRAKVVSKVAKYPHIDDYRRAVVELDEKEYLSL
                     WLVVCEVRNRYSSLHDIVIKNMEKLKKPRSSNAESLY"
     misc_feature    349..525
                     /gene="LOC106095644"
                     /note="Proteasome activator pa28 alpha subunit; Region:
                     PA28_alpha; pfam02251"
                     /db_xref="CDD:460507"
     misc_feature    661..1092
                     /gene="LOC106095644"
                     /note="Proteasome activator pa28 beta subunit; Region:
                     PA28_beta; pfam02252"
                     /db_xref="CDD:460508"
     polyA_site      1295
                     /gene="LOC106095644"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atctgtcaaa caaaacggca ttgcaaagca cgccgacatt tctggggaga ggaaaaaaga
       61 attattcaag aaatattaaa ataattgttt ccaacgaaat acaaaataag taaccacaac
      121 aaaataactt tgttgaaata gtaaataatt gaaactaatc acatattcaa taacaaccaa
      181 gaagcagcta cagttaaatt aattgtcagt cacaaattgc aaaaaaatcc cttaacaatt
      241 tggcgacgtc aatttgtttt gtgaaacaag aagcagcgcc actagccaac caccactaca
      301 aactatccat aaaataaaag aataaaagca aagatgccga tcgataccac tgccaaacag
      361 gttcaggaat acaaagacac cttgatcaag aaggcagagc aactaattat tcaaggattt
      421 ccggagaaga ttgtcgagct caatgaactt ctggacactc ccatgtttag tgagcgcaat
      481 ttcactgagg ttcatcagga cttaaacatt ccagtacccg atcccatatt ggtaaataat
      541 aatggctccg aagccgcagc tgctgctgcc gatggtggtg atgctgatca accagctgcc
      601 aaaagagccc gcactgaaac cccctgtggc accaaggtca tgtatttggc cagcggttcg
      661 gtgccttgca acactcccct ctgcgagatg ataaaagttg ttaagcccat tatcagaaaa
      721 ttagtggaag attctaatct tttgaaaatg tggatttcgt ttatgattcc caagatagaa
      781 gatggcaaca actttggtgt ttccatacag gaagatacct tggcggaaat acaaactgta
      841 gagtctgagg cagctgcttt ctttgatcaa atttcccgct attttttatc cagagccaag
      901 gtggtttcca aagttgctaa atatccccac attgatgact acaggcgtgc cgtggttgaa
      961 ctggacgaaa aggaatatct cagcctatgg ctggtggtat gcgaagtgcg aaatcgctac
     1021 tcctcactgc acgacattgt cattaagaat atggaaaagc taaagaaacc acgttcctcc
     1081 aatgccgaga gtctttacta aagcaaaaaa caaaagagga cccattcaat caatatcacc
     1141 gccacaacca attgctgtat agaaaagaac atcgtgctta ataatttttg tttggttttt
     1201 tcatcttgta ttcgaagaaa caatgaaaga tgatcattaa gacttctctc ctctacctta
     1261 aaatagaaat atatacaaaa cataaaattg taaaa