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PREDICTED: Stomoxys calcitrans INO80 complex subunit C


LOCUS       XM_013262473            1057 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106095232), mRNA.
ACCESSION   XM_013262473
VERSION     XM_013262473.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013262473.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1057
                     /gene="LOC106095232"
                     /note="INO80 complex subunit C; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:106095232"
     CDS             490..954
                     /gene="LOC106095232"
                     /codon_start=1
                     /product="INO80 complex subunit C"
                     /protein_id="XP_013117927.1"
                     /db_xref="GeneID:106095232"
                     /translation="MYQGEEVPHKKHKPDSDGILVEKVDSAHAAPCSNPTLPSTSVLQ
                     RPKILCKNTKFSYFETCGKRFVWKSLKQIITQERSLIWPDDIILYNSLNAPPSLKPPK
                     KYSDISGLHAPYTDPQTRLHYHNSDEFRIIRTLPSDIVQGYLALRGATNIVG"
     misc_feature    610..936
                     /gene="LOC106095232"
                     /note="YL1 nuclear protein C-terminal domain; Region:
                     YL1_C; cl02154"
                     /db_xref="CDD:470478"
     polyA_site      1057
                     /gene="LOC106095232"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctgaggttgc aggccttgcc gatgaaggat tccattgggt caatccggta cataaaatcg
       61 gttgccatgg gagaaatact gggatgtgca cataccgaaa ttttagttat catatagata
      121 agaaaataaa tgacgtcgta tatcgcatcc agaacgatgg tggggcatcg cgtagacact
      181 tcctaattga cattttagtt tttatttgca ttatcatttg tagcaaccaa aagttcaaaa
      241 gatttgttaa tataaacgtg aagaaaggaa caaatttaaa aatctaaaca taggattttg
      301 tattctagtg tgatctgtaa ttggataatt ccatcagctg ggcaagtgac ctaacttatt
      361 ttagtgaacc ctgtgacaac ctttttaaat tagccttgca attttactat caattggcac
      421 gcagccaaat taaataaaac atatgtgatt atattgtatt tggaaaattt aactgactac
      481 tagattaaaa tgtaccaagg ggaagaagta cctcacaaaa aacataaacc tgactccgac
      541 ggcattcttg tcgagaaggt tgactcagca catgccgcgc cgtgctcaaa tccaacttta
      601 ccctcaacat ctgtactgca gcgacctaaa attttatgca aaaacaccaa gtttagctat
      661 tttgaaactt gtggaaaaag atttgtttgg aaatcattga aacagattat aactcaggag
      721 agatcactta tttggccgga tgatataatt ttgtataatt ctttgaatgc acctccgtct
      781 ctaaaaccac ctaagaagta ttctgatata tccggattac atgcacccta caccgatccg
      841 caaacgagac tgcactacca taactctgac gaattccgaa ttattcgcac tttaccgtcc
      901 gacatagtac agggttattt agcacttaga ggagccacaa atattgtagg ttaataatac
      961 ttttaagaat tttgacaaca taaaattaat attgtttaac aatttttaaa acggttatta
     1021 aattggatga atattcgaga tgtcactttt ttgaaaa