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PREDICTED: Stomoxys calcitrans mediator of RNA polymerase II


LOCUS       XM_013261868             704 bp    mRNA    linear   INV 02-SEP-2023
            transcription subunit 10 (LOC106094635), mRNA.
ACCESSION   XM_013261868
VERSION     XM_013261868.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013261868.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..704
                     /gene="LOC106094635"
                     /note="mediator of RNA polymerase II transcription subunit
                     10; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:106094635"
     CDS             144..542
                     /gene="LOC106094635"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 10"
                     /protein_id="XP_013117322.1"
                     /db_xref="GeneID:106094635"
                     /translation="MSAPLENLETQLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQGL
                     VSGLQEINKLKNQVQDIYVPFEVFDYIDQDKNPQLYTKDCVEKALAKNEEVKGKIDAY
                     RKFKSNMLAELFKTFPNEMNMYRAYRPDSV"
     misc_feature    168..521
                     /gene="LOC106094635"
                     /note="Transcription factor subunit Med10 of Mediator
                     complex; Region: Med10; pfam09748"
                     /db_xref="CDD:462879"
     polyA_site      704
                     /gene="LOC106094635"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acatacgctc gtaaaacgca gaacatcatc ttttgcagaa gctgaaagtt gtaatagcag
       61 gagaaaaaaa aaggattaca ggtttatagg aagtttgcaa cagtttattt ttcgaaatta
      121 gcaactataa aaggttcgca aatatgtcgg cacctttgga aaatctggaa acgcaattgg
      181 aaatgtttat agagaatgtg cgacaaatac gcatcatagt ttcggatttt cagccacagg
      241 gacaaaatgt tttgaaccag aaaatccaag gccttgtaag tggacttcaa gaaatcaaca
      301 aattaaaaaa tcaagtccaa gatatctatg tccctttcga agtgttcgac tacattgacc
      361 aggacaaaaa tccacaatta tatacaaagg attgtgtgga gaaggctttg gccaagaatg
      421 aggaagttaa aggaaaaatc gatgcatacc gcaaatttaa atccaatatg ctggcggaac
      481 tcttcaagac gttccccaat gaaatgaata tgtatcgtgc ctatcgccca gactctgtgt
      541 aataaagtta ctagttggtt gattagtcgt gtatggatgg agctggatgg gagcttggac
      601 tgaacttctt ctacaacaac attgtacgca tacaaaacca atttaatatt aagttaagtg
      661 aaaacaacaa aattgtaata aaccaaaaca aaaatcttta ctaa