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PREDICTED: Stomoxys calcitrans cystathionine beta-synthase


LOCUS       XM_013261741            1751 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106094518), transcript variant X4, mRNA.
ACCESSION   XM_013261741
VERSION     XM_013261741.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013261741.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1751
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 32
                     Proteins"
                     /db_xref="GeneID:106094518"
     CDS             65..1615
                     /gene="LOC106094518"
                     /codon_start=1
                     /product="cystathionine beta-synthase"
                     /protein_id="XP_013117195.1"
                     /db_xref="GeneID:106094518"
                     /translation="MPAPKTYERPKDFIDPGKPSKCPWKLGTKEKTVHTQRGIAHRQK
                     ITPNILEVIGCTPLVKLNHIPKSEGIKCEMYAKCEFLNPGGSVKDRIGYRMVQDAEEM
                     GLLKPGCTIIEPTSGNTGIGLAMACAVKGYKCLIVMPEKMSNEKVSALRALGAKIIRT
                     PTEAAYDSPEGLICVAQRLQKEIPDSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVD
                     MIVCSAGTAGTISGVARKIKEELPSCQIVGVDPYGSILARPKELNQSDVQFYEVEGIG
                     YDFIPTVMDHSVVDVWTKIGDKDCFPMSRRLNAEEGLLCGGSSGGAMSAALKFAKTLK
                     EGQRCVVILPDGIRNYMTKFVSDNWMEARDFKDVVNEHQHWWWNIPIKDLKVGAPISV
                     KSDVTFSHAIDVMKKNNLNQIAMLDEDDGSILGTVGQETLINQMVSMNRQPSDLALKA
                     INKRVIRMPSSAILGKLARVLEVDPSVLIVDQEDGKDIFKGIATKLDVMSFIAAGKQT
                     QNGVNGNH"
     misc_feature    197..1573
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Region: cysta_beta;
                     TIGR01137"
                     /db_xref="CDD:273464"
     polyA_site      1751
                     /gene="LOC106094518"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttcaaccaa aattgccgat aagagtcttg tgatttttta ttagccaaaa aaaattatac
       61 aaaaatgcct gcccccaaaa cctatgaaag acctaaggat ttcattgatc ctggaaaacc
      121 atcaaaatgt ccatggaagt tgggcaccaa agagaagact gtacacactc agcgtggcat
      181 agctcatcgc caaaagatca ccccaaatat tttggaggtt attggctgca cacctttggt
      241 caaattgaac cacataccta agtcggaggg tatcaaatgt gaaatgtatg ccaaatgtga
      301 attccttaat ccaggtggtt cagtcaaaga tcgcattggc tatcgcatgg ttcaagatgc
      361 cgaagagatg ggtcttctta aacccggctg caccattatc gagcctacat cgggtaacac
      421 aggcattggt ttggccatgg cctgtgccgt caagggctac aaatgtctga ttgttatgcc
      481 cgaaaaaatg tccaatgaga aagtttcagc cctacgtgcc ctaggtgcca aaatcattcg
      541 tacacccaca gaggctgcct acgattcacc cgagggcttg atttgtgtag cccaacgtct
      601 gcaaaaagaa attcccgact ccattgttct ggatcaatat cgtaacgcag gaaatccttt
      661 ggcccactac gacggcactg ctgccgaaat cctttggcaa ttggacaata aggtggacat
      721 gattgtctgc agcgctggta ctgctggaac tatttcgggt gttgctcgta aaattaaaga
      781 ggaactaccc tcatgccaaa ttgttggcgt tgatccgtac ggttcgattt tggctcgtcc
      841 caaagaattg aaccaatctg atgtacaatt ctatgaggtg gaaggtattg gatatgattt
      901 tatacccaca gtcatggatc attcggtggt cgatgtgtgg acaaaaatcg gcgacaagga
      961 ctgtttcccc atgagccgcc gtttgaatgc cgaagaaggt ttgctgtgtg gtggctcatc
     1021 tggaggtgct atgagtgcgg ccctgaaatt cgccaaaacc ctgaaggagg gtcaacgctg
     1081 tgttgtcatc ttacccgatg gcattcgcaa ttacatgacc aaattcgtat cggacaactg
     1141 gatggaggca cgcgacttca aggatgtcgt caatgagcat caacactggt ggtggaacat
     1201 tccaatcaaa gatttgaaag ttggtgcacc gatatctgtg aagtcggatg tgacattttc
     1261 gcatgccatt gacgttatga aaaagaacaa tctgaatcag attgctatgt tggatgaaga
     1321 cgatggttcc attttgggta ctgtgggtca ggagactttg atcaatcaaa tggttagcat
     1381 gaaccgccaa cccagtgact tggctttgaa ggctatcaac aagcgcgtta ttcgtatgcc
     1441 atcctcagcc atattgggta aattggcgcg tgttttggaa gttgatccca gtgtgttaat
     1501 tgttgaccaa gaagatggaa aggatatctt taaaggtata gccacaaaac ttgatgtcat
     1561 gagtttcatt gccgcaggaa aacaaactca gaatggtgta aatggtaacc attagatatg
     1621 catgtgcata caaatgccta aattatgtat gcagacgtgt gtgcataaat tgaatgcaca
     1681 catgttcatc gttgatattt aacacaaatt gtcctacata ataataatta caataaagaa
     1741 ttttatatta a