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PREDICTED: Stomoxys calcitrans cystathionine beta-synthase


LOCUS       XM_013261739            1830 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106094518), transcript variant X3, mRNA.
ACCESSION   XM_013261739
VERSION     XM_013261739.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013261739.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1830
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 32
                     Proteins"
                     /db_xref="GeneID:106094518"
     CDS             144..1694
                     /gene="LOC106094518"
                     /codon_start=1
                     /product="cystathionine beta-synthase"
                     /protein_id="XP_013117193.1"
                     /db_xref="GeneID:106094518"
                     /translation="MPAPKTYERPKDFIDPGKPSKCPWKLGTKEKTVHTQRGIAHRQK
                     ITPNILEVIGCTPLVKLNHIPKSEGIKCEMYAKCEFLNPGGSVKDRIGYRMVQDAEEM
                     GLLKPGCTIIEPTSGNTGIGLAMACAVKGYKCLIVMPEKMSNEKVSALRALGAKIIRT
                     PTEAAYDSPEGLICVAQRLQKEIPDSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVD
                     MIVCSAGTAGTISGVARKIKEELPSCQIVGVDPYGSILARPKELNQSDVQFYEVEGIG
                     YDFIPTVMDHSVVDVWTKIGDKDCFPMSRRLNAEEGLLCGGSSGGAMSAALKFAKTLK
                     EGQRCVVILPDGIRNYMTKFVSDNWMEARDFKDVVNEHQHWWWNIPIKDLKVGAPISV
                     KSDVTFSHAIDVMKKNNLNQIAMLDEDDGSILGTVGQETLINQMVSMNRQPSDLALKA
                     INKRVIRMPSSAILGKLARVLEVDPSVLIVDQEDGKDIFKGIATKLDVMSFIAAGKQT
                     QNGVNGNH"
     misc_feature    276..1652
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Region: cysta_beta;
                     TIGR01137"
                     /db_xref="CDD:273464"
     polyA_site      1830
                     /gene="LOC106094518"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aagattgatg ggatctttca cttacctgca tgtttgtgtg tgttttctac aactattgta
       61 gataactaaa aaagaggagc tgaattgtta tctttggcaa gtggtcttgt gattttttat
      121 tagccaaaaa aaattataca aaaatgcctg cccccaaaac ctatgaaaga cctaaggatt
      181 tcattgatcc tggaaaacca tcaaaatgtc catggaagtt gggcaccaaa gagaagactg
      241 tacacactca gcgtggcata gctcatcgcc aaaagatcac cccaaatatt ttggaggtta
      301 ttggctgcac acctttggtc aaattgaacc acatacctaa gtcggagggt atcaaatgtg
      361 aaatgtatgc caaatgtgaa ttccttaatc caggtggttc agtcaaagat cgcattggct
      421 atcgcatggt tcaagatgcc gaagagatgg gtcttcttaa acccggctgc accattatcg
      481 agcctacatc gggtaacaca ggcattggtt tggccatggc ctgtgccgtc aagggctaca
      541 aatgtctgat tgttatgccc gaaaaaatgt ccaatgagaa agtttcagcc ctacgtgccc
      601 taggtgccaa aatcattcgt acacccacag aggctgccta cgattcaccc gagggcttga
      661 tttgtgtagc ccaacgtctg caaaaagaaa ttcccgactc cattgttctg gatcaatatc
      721 gtaacgcagg aaatcctttg gcccactacg acggcactgc tgccgaaatc ctttggcaat
      781 tggacaataa ggtggacatg attgtctgca gcgctggtac tgctggaact atttcgggtg
      841 ttgctcgtaa aattaaagag gaactaccct catgccaaat tgttggcgtt gatccgtacg
      901 gttcgatttt ggctcgtccc aaagaattga accaatctga tgtacaattc tatgaggtgg
      961 aaggtattgg atatgatttt atacccacag tcatggatca ttcggtggtc gatgtgtgga
     1021 caaaaatcgg cgacaaggac tgtttcccca tgagccgccg tttgaatgcc gaagaaggtt
     1081 tgctgtgtgg tggctcatct ggaggtgcta tgagtgcggc cctgaaattc gccaaaaccc
     1141 tgaaggaggg tcaacgctgt gttgtcatct tacccgatgg cattcgcaat tacatgacca
     1201 aattcgtatc ggacaactgg atggaggcac gcgacttcaa ggatgtcgtc aatgagcatc
     1261 aacactggtg gtggaacatt ccaatcaaag atttgaaagt tggtgcaccg atatctgtga
     1321 agtcggatgt gacattttcg catgccattg acgttatgaa aaagaacaat ctgaatcaga
     1381 ttgctatgtt ggatgaagac gatggttcca ttttgggtac tgtgggtcag gagactttga
     1441 tcaatcaaat ggttagcatg aaccgccaac ccagtgactt ggctttgaag gctatcaaca
     1501 agcgcgttat tcgtatgcca tcctcagcca tattgggtaa attggcgcgt gttttggaag
     1561 ttgatcccag tgtgttaatt gttgaccaag aagatggaaa ggatatcttt aaaggtatag
     1621 ccacaaaact tgatgtcatg agtttcattg ccgcaggaaa acaaactcag aatggtgtaa
     1681 atggtaacca ttagatatgc atgtgcatac aaatgcctaa attatgtatg cagacgtgtg
     1741 tgcataaatt gaatgcacac atgttcatcg ttgatattta acacaaattg tcctacataa
     1801 taataattac aataaagaat tttatattaa