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PREDICTED: Stomoxys calcitrans cystathionine beta-synthase


LOCUS       XM_013261738            1816 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106094518), transcript variant X1, mRNA.
ACCESSION   XM_013261738
VERSION     XM_013261738.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013261738.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1816
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 32
                     Proteins"
                     /db_xref="GeneID:106094518"
     CDS             130..1680
                     /gene="LOC106094518"
                     /codon_start=1
                     /product="cystathionine beta-synthase"
                     /protein_id="XP_013117192.1"
                     /db_xref="GeneID:106094518"
                     /translation="MPAPKTYERPKDFIDPGKPSKCPWKLGTKEKTVHTQRGIAHRQK
                     ITPNILEVIGCTPLVKLNHIPKSEGIKCEMYAKCEFLNPGGSVKDRIGYRMVQDAEEM
                     GLLKPGCTIIEPTSGNTGIGLAMACAVKGYKCLIVMPEKMSNEKVSALRALGAKIIRT
                     PTEAAYDSPEGLICVAQRLQKEIPDSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVD
                     MIVCSAGTAGTISGVARKIKEELPSCQIVGVDPYGSILARPKELNQSDVQFYEVEGIG
                     YDFIPTVMDHSVVDVWTKIGDKDCFPMSRRLNAEEGLLCGGSSGGAMSAALKFAKTLK
                     EGQRCVVILPDGIRNYMTKFVSDNWMEARDFKDVVNEHQHWWWNIPIKDLKVGAPISV
                     KSDVTFSHAIDVMKKNNLNQIAMLDEDDGSILGTVGQETLINQMVSMNRQPSDLALKA
                     INKRVIRMPSSAILGKLARVLEVDPSVLIVDQEDGKDIFKGIATKLDVMSFIAAGKQT
                     QNGVNGNH"
     misc_feature    262..1638
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Region: cysta_beta;
                     TIGR01137"
                     /db_xref="CDD:273464"
     polyA_site      1816
                     /gene="LOC106094518"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tggtgcggta ggttctgagg cagtcagtag caataaaact ctgattgaag tggggaggcc
       61 atcttccggt gtcgccaaag tgtgtatgag tcttgtgatt ttttattagc caaaaaaaat
      121 tatacaaaaa tgcctgcccc caaaacctat gaaagaccta aggatttcat tgatcctgga
      181 aaaccatcaa aatgtccatg gaagttgggc accaaagaga agactgtaca cactcagcgt
      241 ggcatagctc atcgccaaaa gatcacccca aatattttgg aggttattgg ctgcacacct
      301 ttggtcaaat tgaaccacat acctaagtcg gagggtatca aatgtgaaat gtatgccaaa
      361 tgtgaattcc ttaatccagg tggttcagtc aaagatcgca ttggctatcg catggttcaa
      421 gatgccgaag agatgggtct tcttaaaccc ggctgcacca ttatcgagcc tacatcgggt
      481 aacacaggca ttggtttggc catggcctgt gccgtcaagg gctacaaatg tctgattgtt
      541 atgcccgaaa aaatgtccaa tgagaaagtt tcagccctac gtgccctagg tgccaaaatc
      601 attcgtacac ccacagaggc tgcctacgat tcacccgagg gcttgatttg tgtagcccaa
      661 cgtctgcaaa aagaaattcc cgactccatt gttctggatc aatatcgtaa cgcaggaaat
      721 cctttggccc actacgacgg cactgctgcc gaaatccttt ggcaattgga caataaggtg
      781 gacatgattg tctgcagcgc tggtactgct ggaactattt cgggtgttgc tcgtaaaatt
      841 aaagaggaac taccctcatg ccaaattgtt ggcgttgatc cgtacggttc gattttggct
      901 cgtcccaaag aattgaacca atctgatgta caattctatg aggtggaagg tattggatat
      961 gattttatac ccacagtcat ggatcattcg gtggtcgatg tgtggacaaa aatcggcgac
     1021 aaggactgtt tccccatgag ccgccgtttg aatgccgaag aaggtttgct gtgtggtggc
     1081 tcatctggag gtgctatgag tgcggccctg aaattcgcca aaaccctgaa ggagggtcaa
     1141 cgctgtgttg tcatcttacc cgatggcatt cgcaattaca tgaccaaatt cgtatcggac
     1201 aactggatgg aggcacgcga cttcaaggat gtcgtcaatg agcatcaaca ctggtggtgg
     1261 aacattccaa tcaaagattt gaaagttggt gcaccgatat ctgtgaagtc ggatgtgaca
     1321 ttttcgcatg ccattgacgt tatgaaaaag aacaatctga atcagattgc tatgttggat
     1381 gaagacgatg gttccatttt gggtactgtg ggtcaggaga ctttgatcaa tcaaatggtt
     1441 agcatgaacc gccaacccag tgacttggct ttgaaggcta tcaacaagcg cgttattcgt
     1501 atgccatcct cagccatatt gggtaaattg gcgcgtgttt tggaagttga tcccagtgtg
     1561 ttaattgttg accaagaaga tggaaaggat atctttaaag gtatagccac aaaacttgat
     1621 gtcatgagtt tcattgccgc aggaaaacaa actcagaatg gtgtaaatgg taaccattag
     1681 atatgcatgt gcatacaaat gcctaaatta tgtatgcaga cgtgtgtgca taaattgaat
     1741 gcacacatgt tcatcgttga tatttaacac aaattgtcct acataataat aattacaata
     1801 aagaatttta tattaa