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PREDICTED: Stomoxys calcitrans cystathionine beta-synthase


LOCUS       XM_013261737            1874 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106094518), transcript variant X2, mRNA.
ACCESSION   XM_013261737
VERSION     XM_013261737.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013261737.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1874
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 32
                     Proteins"
                     /db_xref="GeneID:106094518"
     CDS             188..1738
                     /gene="LOC106094518"
                     /codon_start=1
                     /product="cystathionine beta-synthase"
                     /protein_id="XP_013117191.1"
                     /db_xref="GeneID:106094518"
                     /translation="MPAPKTYERPKDFIDPGKPSKCPWKLGTKEKTVHTQRGIAHRQK
                     ITPNILEVIGCTPLVKLNHIPKSEGIKCEMYAKCEFLNPGGSVKDRIGYRMVQDAEEM
                     GLLKPGCTIIEPTSGNTGIGLAMACAVKGYKCLIVMPEKMSNEKVSALRALGAKIIRT
                     PTEAAYDSPEGLICVAQRLQKEIPDSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVD
                     MIVCSAGTAGTISGVARKIKEELPSCQIVGVDPYGSILARPKELNQSDVQFYEVEGIG
                     YDFIPTVMDHSVVDVWTKIGDKDCFPMSRRLNAEEGLLCGGSSGGAMSAALKFAKTLK
                     EGQRCVVILPDGIRNYMTKFVSDNWMEARDFKDVVNEHQHWWWNIPIKDLKVGAPISV
                     KSDVTFSHAIDVMKKNNLNQIAMLDEDDGSILGTVGQETLINQMVSMNRQPSDLALKA
                     INKRVIRMPSSAILGKLARVLEVDPSVLIVDQEDGKDIFKGIATKLDVMSFIAAGKQT
                     QNGVNGNH"
     misc_feature    320..1696
                     /gene="LOC106094518"
                     /note="cystathionine beta-synthase; Region: cysta_beta;
                     TIGR01137"
                     /db_xref="CDD:273464"
     polyA_site      1874
                     /gene="LOC106094518"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agagaaagcc tcaaacgttt ggttgttttg ccaaaaacca cggtcacagg gggcttgcaa
       61 actaactgat aacgaaatag caaataatag agatactatc agagaaatta aatcagtttt
      121 atattcacat cggacaagtg ctcaagtgtc ttgtgatttt ttattagcca aaaaaaatta
      181 tacaaaaatg cctgccccca aaacctatga aagacctaag gatttcattg atcctggaaa
      241 accatcaaaa tgtccatgga agttgggcac caaagagaag actgtacaca ctcagcgtgg
      301 catagctcat cgccaaaaga tcaccccaaa tattttggag gttattggct gcacaccttt
      361 ggtcaaattg aaccacatac ctaagtcgga gggtatcaaa tgtgaaatgt atgccaaatg
      421 tgaattcctt aatccaggtg gttcagtcaa agatcgcatt ggctatcgca tggttcaaga
      481 tgccgaagag atgggtcttc ttaaacccgg ctgcaccatt atcgagccta catcgggtaa
      541 cacaggcatt ggtttggcca tggcctgtgc cgtcaagggc tacaaatgtc tgattgttat
      601 gcccgaaaaa atgtccaatg agaaagtttc agccctacgt gccctaggtg ccaaaatcat
      661 tcgtacaccc acagaggctg cctacgattc acccgagggc ttgatttgtg tagcccaacg
      721 tctgcaaaaa gaaattcccg actccattgt tctggatcaa tatcgtaacg caggaaatcc
      781 tttggcccac tacgacggca ctgctgccga aatcctttgg caattggaca ataaggtgga
      841 catgattgtc tgcagcgctg gtactgctgg aactatttcg ggtgttgctc gtaaaattaa
      901 agaggaacta ccctcatgcc aaattgttgg cgttgatccg tacggttcga ttttggctcg
      961 tcccaaagaa ttgaaccaat ctgatgtaca attctatgag gtggaaggta ttggatatga
     1021 ttttataccc acagtcatgg atcattcggt ggtcgatgtg tggacaaaaa tcggcgacaa
     1081 ggactgtttc cccatgagcc gccgtttgaa tgccgaagaa ggtttgctgt gtggtggctc
     1141 atctggaggt gctatgagtg cggccctgaa attcgccaaa accctgaagg agggtcaacg
     1201 ctgtgttgtc atcttacccg atggcattcg caattacatg accaaattcg tatcggacaa
     1261 ctggatggag gcacgcgact tcaaggatgt cgtcaatgag catcaacact ggtggtggaa
     1321 cattccaatc aaagatttga aagttggtgc accgatatct gtgaagtcgg atgtgacatt
     1381 ttcgcatgcc attgacgtta tgaaaaagaa caatctgaat cagattgcta tgttggatga
     1441 agacgatggt tccattttgg gtactgtggg tcaggagact ttgatcaatc aaatggttag
     1501 catgaaccgc caacccagtg acttggcttt gaaggctatc aacaagcgcg ttattcgtat
     1561 gccatcctca gccatattgg gtaaattggc gcgtgttttg gaagttgatc ccagtgtgtt
     1621 aattgttgac caagaagatg gaaaggatat ctttaaaggt atagccacaa aacttgatgt
     1681 catgagtttc attgccgcag gaaaacaaac tcagaatggt gtaaatggta accattagat
     1741 atgcatgtgc atacaaatgc ctaaattatg tatgcagacg tgtgtgcata aattgaatgc
     1801 acacatgttc atcgttgata tttaacacaa attgtcctac ataataataa ttacaataaa
     1861 gaattttata ttaa