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LOCUS XM_013261534 7293 bp mRNA linear INV 02-SEP-2023 hydrolase 7 (LOC106094327), mRNA. ACCESSION XM_013261534 VERSION XM_013261534.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013261534.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7293 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7293 /gene="LOC106094327" /note="ubiquitin carboxyl-terminal hydrolase 7; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106094327" CDS 661..4014 /gene="LOC106094327" /codon_start=1 /product="ubiquitin carboxyl-terminal hydrolase 7" /protein_id="XP_013116988.1" /db_xref="GeneID:106094327" /translation="MEIEPDQSMEAMDIQEIDSLPGADLQHQQHLNKLHLPPSAGQLP NENGNVPPQQLLADSGSPYANEQEMTAIEDGPKEDEFRSETVFSFTVEKIAQVKSQVL SPPVYVRMLPWKIMVIPNDRALGFFLQCNGENESSSWSCNAIAELRLKSHKPGVKPFS RMRIKHLFFAKENDYGYSNFITWQELQDPENCYVHNGAITLEVFVHADAPHGVFWDSK KHTGCVGLKNQGATCYMNSLLQTLYFTNQLRRAVYKIPTEADDSTKSVGLSLQRVFHE LQFSDKPVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTNLEGTIPGLF EGKMSSYIKCKNVDYNSTRYETFYDIQLNIKDKKDIYESFQDYITPETLDGDNKYDAG VHGLQEANKGVQFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFQFYEQITLDRFLEKE GETKAEYILHAVLVHSGDNHGGHYVVYINPKCDGKWFKFDDDVVCTCWKNEAIDMNYG GMDEEVSFHPKCSNAYMLVYIRKSEIERVLSDIPEHEIPSELVERLELEKRIEMAKRK ERSEANLYVSIHVILEEYFEAQQKRRLFDLDKVHQRLFKMKQTQTIEEMMDQFVKSFC VPKDRMRVWIMYATQTQKFLYFDFQREGGRSIEQIATSQKPWVIFLELASPDKIGRPL SPFDPKKEVLIFFKYYDARNKRLNYIGCSQQPLGRCLNELIPDINSHLGFEIDTELTV FDECNDRRITNLNENLETVLNLNPDNADRGSLQGYVLIFEKEHIDPKLELPTVADYFS DLVYRVDITFCDKSNPNEPEIILELSNRYNYDQMAQAVAERLNTDPNKLQFFTCTGSY KDQPGTAIQYNQKGCLKDLLALASTKQSNPKKLFYQRLSLSIHELDNKKQFKCIWVSN DLKEEKELVLYPNKNDTVKGLLDEAAKKIQFSENSSKKLRLLKVNNHKIAMIVKEDTP LESLQKTTEPITPQSNQKTFRIEEVPLEDLQLAENETLIPVAHYSKEIFSVFGVPFLI KARQGEPYGALKQRIQKRLNVPDKEWENYKFTVIGGNTPDVNDNTPIDLNVYRSWNSN APHFGLDHINKSRKRTSLNFSEKAIKIYN" misc_feature 919..3981 /gene="LOC106094327" /note="Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly...; Region: Peptidase_C19; cl02553" /db_xref="CDD:470612" misc_feature order(1342..1344,1357..1359,2077..2079,2131..2133) /gene="LOC106094327" /note="active site" /db_xref="CDD:239124" polyA_site 7293 /gene="LOC106094327" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tggtaatata aagattgagt tgaaaagaag catataattt gttgttgctg ttcacactcc 61 gagtcgattg acttcatgaa aaaaacacga cgtgaggcgt tgcaaaagaa tacgatcgaa 121 attgcgaaac aagaaattga atttattggc ctttatgtgc aataaaatta aaaattatat 181 gaggtattga atttttaatc gcctttttca tcattacgct gcagaaggat taaggattgt 241 ttttctaagc ggcatctctg ttgtcgctgt tctgctgctg catttttttt gcatatgtgt 301 taaagtttat tgtcggtatt gaagagtgtc atcgtcgtcg tcggtatttt cgtatgtgtg 361 cgtgacttgt gtgaatataa atgccaaaga aagaaagatt gcgaaaaagg agaattttga 421 caggtccaca aacaacaaaa gaaaagcaaa caaaacaacg aggtggtgaa agaaggaaga 481 ataagctatt gcttgttcaa gaaaaaatta aaatttttaa gaggaataaa aagttttgga 541 aattctctga gcattcgagg cgtataaagg caaaaatcaa tcttgttact aaaagcctca 601 ccaagtgtca caggaagaac gacggaaaaa agcaaccgcg tcacgcaagc acacaagaag 661 atggaaattg agccggatca atcaatggaa gcaatggata tacaagaaat cgattcacta 721 cctggtgcag atctacagca tcaacagcat cttaataaac tccacttgcc accttcggcc 781 ggccaattgc caaatgagaa tggcaatgtg ccgcctcaac aactcttagc cgattctgga 841 tctccatacg ccaacgagca ggaaatgaca gcaatagaag atggccctaa ggaagatgaa 901 tttcgttctg aaacggtatt ctcctttacg gttgaaaaaa ttgcccaggt gaaatcgcaa 961 gttctgtcac cacccgtgta cgtgcgtatg ttgccatgga agattatggt catacctaat 1021 gatcgagcac tagggttctt cctgcagtgt aacggtgaaa atgaatcatc ctcttggtcg 1081 tgtaatgcca tagcagaatt acgactcaaa agtcacaagc ctggtgtcaa accattctcc 1141 cgcatgcgca taaaacactt atttttcgca aaagaaaacg actacggcta ttcgaatttt 1201 ataacttggc aagaacttca agatccggaa aactgttacg tccacaacgg tgccattact 1261 ttagaagtat ttgtgcacgc cgatgcgcca catggtgtat tttgggactc gaagaaacac 1321 accggatgtg tcggccttaa aaaccaagga gcaacctgtt acatgaattc cctcctacaa 1381 actctctact ttaccaacca acttcgtcgg gccgtctata aaatccccac ggaagcagat 1441 gatagcacca aatccgtcgg tctttctctg cagagggtat tccatgagtt gcagtttagc 1501 gacaaacccg tgggtaccaa gaaacttaca aagtcctttg gttgggaaac acttgattca 1561 ttcatgcaac atgatgtcca ggaatttctg cgtgttctgc ttgacaaact ggagtctaaa 1621 atgaaaggta ctaatttaga aggcactatt ccaggactgt ttgaagggaa aatgtcatct 1681 tacataaaat gtaagaatgt cgactacaac agcacacgct atgagacatt ctatgatatt 1741 caactaaata ttaaggacaa aaaagatata tatgaatcat ttcaagatta tataacacca 1801 gaaacattgg atggtgataa caaatatgat gctggagttc atggtttaca ggaagccaat 1861 aaaggtgttc agttcacttc attcccgcct gtattacatt tgcatttaat gcgttttcag 1921 tatgatccag tcaccgatag ttctatcaaa tataatgacc gcttccaatt ttatgaacaa 1981 ataactttag atcgtttcct cgagaaggaa ggcgaaacca aagctgaata cattttacat 2041 gctgtccttg tacattcggg tgataatcac ggtggccatt atgttgttta tatcaatcca 2101 aaatgcgatg gcaaatggtt caagttcgac gatgacgtcg tatgtacttg ctggaaaaat 2161 gaagcgatcg atatgaacta tggtggcatg gacgaagagg tgtctttcca tcccaagtgt 2221 agtaatgcgt acatgttggt gtacatacgc aaatcggaaa tcgaacgtgt cctcagcgat 2281 atacccgaac atgaaatacc cagtgagcta gtcgaacgtt tggaattgga gaaacgaatt 2341 gaaatggcaa agcgcaaaga acgcagtgag gctaatctat acgtgtcgat acatgtaatt 2401 ttagaggaat actttgaggc ccaacaaaag cgacgcctct ttgacttgga caaggtacat 2461 caaagattgt ttaaaatgaa gcaaacacaa actattgagg aaatgatgga tcaatttgtg 2521 aaatcatttt gtgtacctaa ggatcgtatg cgtgtttgga taatgtatgc gacacaaact 2581 caaaaattcc tgtatttcga tttccaacgt gagggtgggc gttcaatcga acaaattgcg 2641 acctcacaaa aaccctgggt aattttcctt gaattggctt caccagataa aataggcaga 2701 ccactgtctc cattcgatcc caagaaagaa gttcttatct tcttcaagta ttatgacgcc 2761 cgaaataagc gcctcaatta tatcggatgt tcacaacagc cgctgggtcg atgtttgaat 2821 gaattaatac ctgatattaa ttcacattta ggttttgaaa ttgacactga acttacagtc 2881 tttgacgaat gtaatgatcg ccggataaca aatttgaatg aaaatttgga gactgtgcta 2941 aatttgaatc cagataatgc tgaccgtggc agccttcaag gttatgtttt gatatttgaa 3001 aaggaacaca ttgatccaaa acttgaatta ccaaccgtcg cagactactt tagtgactta 3061 gtttacagag tagatatcac attttgtgac aaaagtaatc caaatgaacc ggaaatcatt 3121 ttagagttgt caaaccgtta caattacgat cagatggcac aagctgtggc tgaacgctta 3181 aatacagatc ccaataaatt gcaattcttc acttgtaccg gtagctacaa agatcaacca 3241 ggcaccgcta ttcaatataa ccaaaaaggt tgtctgaagg atctgttagc attggcttca 3301 accaagcaaa gcaatccaaa aaagcttttc tatcaaagac tgtcgctcag catccacgaa 3361 ttggacaata agaaacaatt taaatgcatt tgggtatcaa atgacctcaa ggaggaaaaa 3421 gagttggttc tgtatccaaa taaaaatgac acggtaaagg gtttgttgga tgaggcggct 3481 aaaaaaatac aattctcgga gaacagttca aagaaactgc gtttgcttaa ggtgaataat 3541 cataaaatag caatgattgt caaagaggat acaccccttg aatctctgca aaagacaact 3601 gaaccaataa cacctcagag taaccaaaag acgttccgaa ttgaagaagt gcctcttgaa 3661 gacctacaac tggcagaaaa tgaaactctt attccagttg cacactacag caaagaaatt 3721 ttcagcgtat ttggagtacc atttttgatc aaagcgcggc aaggtgaacc atatggtgcc 3781 cttaagcagc gtatacaaaa acgtttaaat gtcccagaca aagaatggga gaactataag 3841 tttacggtta ttggtggtaa tacgcctgat gttaatgata acacacctat agatttgaac 3901 gtttaccgct cctggaatag caatgcccct cactttggcc ttgatcacat taataagtcc 3961 cgtaaaagaa catcgttgaa cttctctgaa aaggccatta agatatataa ttaaaaaaat 4021 agcaacagta acacacagaa atatcacata cacagagaca cccacgtaca cacctaatac 4081 actaatgtta tgtacgcgaa tttgaaaaaa agagttcaag caaacgatat atacatatat 4141 agcgtaaatt gtatcgttca tgttgcacca aaaaccatca tcgcctttga ggggatacca 4201 cagccaacac agataaaaaa aattattaga accattgcag aggatggttt caaaatttat 4261 ttgatcaaat ctagagatac catacaaaga agccacagta ccaacccata tacccaaaaa 4321 agttcatgaa cgaattacaa tgttgatcat tattatacaa aaactcgtgc ataagccgtt 4381 aaattcatgc aaaacgagat aatattcaaa cagcagtcgt cacgagtcat catgaattaa 4441 tttaacgata atatatttta aaatttatga aataactatt aaatcagcag aattatatat 4501 atttttcaat agaaattttc aataaaacac cacctcattc attaagaaag tacatcagac 4561 aggaaacaag aaacagaaca gccagcaaaa cagcattcac gagaggaatg aaatgataca 4621 cacttctaaa gaaaaaaaac tatgcgtttg ttattattta tgtttattat aaaaaagaaa 4681 attatatatt ataaatatga aaaatttgca aaaactaaaa aatttaaact ctgtcaactg 4741 tagttaagat atgctttctc cagcaaaaaa gaaaaagaaa taacaaaaat taacctacaa 4801 attataaata actcaaaaca aatttataaa tccaataatt taaaacattt taaaggagac 4861 gaaaatagcg ggtaagatga ttgctttatc agcatttaat tggtcaattg tgttcgtcct 4921 agatacagat gtaaatagag atgaaataag atagaataaa acgaatgtaa gagaggaagt 4981 tactttgaca catggacaaa gcacctgctc atggagagga aagatagaga gaaacgaatc 5041 tccggcgcac actaacagaa aaacctcatc aattgtaatt tcgccccgct agccacacca 5101 ggtccttaca gaagcccaga atgacaaggg gtcgattgcc tgcagagagc ttagagaaga 5161 aaagaggtgt tcaacctgcg ccttctaccc accatgcggc gcattggtac agcagatgcc 5221 agactttctc caactcctcc tcatcaccaa agaccatgca gaaatcctct ttgtttcttg 5281 tctgtgcaga gcccgacgtt tgattcgccg gcagctatag cagctgggac tcaatacttt 5341 cattcgagat ccatcctgtt gcttgaacag gcatcgatgc aaggttaagc tttgtctctg 5401 gtcaggggaa ctcaatgttc tcaattgccc aacgcaagaa gttcttggat ttcttgttgg 5461 tgcaatcagt taccttgagt ccatccttaa aatgagttcc atcaaacatt atatcgtcgt 5521 tgctccacct agctgaaagc atcagcttaa tgtcctattg cttccagtag gctgggctaa 5581 tcttaccgtc agtttctgag aattttgcca cctgaagtga cctctgtttc tctttcaagt 5641 acttcattct gtctcgttgt tgttgtagca gtgtgttgtt cactaaggcg gcaacgcttg 5701 ccgatgaagg atttcatcgg gtcaatccgg tacgttcaat cggctgcctc gtcttcgttc 5761 ctggctgatt ctcctcggtt gatctatttt tctgtgaagg tagaagagcg aagcagccgg 5821 ccgagtgata gacggagtgt cagaggctgt gacaattggc gcccctgcct ccaccacatc 5881 caaggtagtc gcttgtttgc tgacagactc tcactctctt accccagctg tcactggtgc 5941 tattgcgacc agtccaggat tagtgacagt aaggcgggaa ccacgctgag tgaagagtaa 6001 cccccctgat cgtccacaga ggggccagta agctcaactt cttttcatcg ctttgatacg 6061 tcctttcatg aggaagaagc gttttccagg ggatacttat gagccccctc ttcctacgtg 6121 taatttcgct ctcgctatta ccgacggatc tccgcagata agagcaagct cgctggtggg 6181 taccctttgc tttcttggtc tttgttttcc gcttatttgg cgtgaggttt cactcgtcat 6241 gtcgaggtca agcgtacccg tgctgatacc ctaattctcc gtctccgatc gcctggtagc 6301 cttctggtcg gttgccggac tttgcaaacc gcctattagt agtcctggtt ctatacgagg 6361 acgccctggc caccctgttc tatttcacaa tagagaaatg gcttagtatt ttcgatattt 6421 cataatgcca atggaccact gacttcgaaa ctatttcttt ttgtttttta tgtatgtaca 6481 cgttaaacta actgagcttt caaacaatat gttttaaagg ggaacatttg taatttggta 6541 cattttatgt tgtgtcgtac aagatcaata ataaaacaag ttttcgaaat attttgatat 6601 atgtatattc aattttgggt acaatgtcag ttcaatgcag cctctactta tgccatatta 6661 acgaaaatat gctttcaaga aaaaatgtgc aggtgaaaac aaatctagtg aaaatcaacg 6721 ctaagaataa taaatgaaaa tatgagaatt ttataaagtg aaattggaga aaaattaaaa 6781 tattcaacca gatttaaaat tttggaatgt aaataaaaag tctggttaaa tgaagtctta 6841 gatttaatga tgttggaagg aagaaaaaga gttatcatca tgttctgatc gttaccaatc 6901 aaaaactatc tgcaatattg gaggaatttc gccaaacggg cttatggtgg aaacaagaaa 6961 aaagtctata tagagtttat aaagaaagta aagtgcagac acaaaaatta aggtacatat 7021 attgaagttt gtgtgagaca aactatcaaa aatccccacg aattactgtc tttacgttta 7081 ttgtgttgcc gccatatatc cacgatacga aataaacgta tttacttgca caaacgtatt 7141 tacttaccaa aacacatttt ttataagact atttaaaata ctaagtaact tatattagag 7201 ttacatccca taaatattac aaacttgcat attcacatat tttgtctttc ctttgtcatg 7261 aaattaagta ttaaagactt gtatattcac ata