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LOCUS XM_013261533 1667 bp mRNA linear INV 02-SEP-2023 (LOC106094325), mRNA. ACCESSION XM_013261533 VERSION XM_013261533.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013261533.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1667 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1667 /gene="LOC106094325" /note="tetratricopeptide repeat protein 17; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106094325" CDS 87..1487 /gene="LOC106094325" /codon_start=1 /product="tetratricopeptide repeat protein 17" /protein_id="XP_013116987.1" /db_xref="GeneID:106094325" /translation="MLNSRFILVLLFPSFYKILASNHYALKLGESFIKRRLDSPFHLR DPCDLPTFLEQIRNNDSAEEAFRKMQRKRSKLDDHLLITAQLLQNILERSKCARVYIK MTGLSDYLRTTGASMKRLEFPEKLEKDAKDGEPICTIYANLDSQRDTYGNLQCFSKEF VDTMNIEKEENLLKLELGLKDAESVTEIIYSVAIKGLLNNPTSWKFHMLGSYYWRLVG NAKNALDCARLSVHLAPEEHKDIPLLSLGTILVRAEVWDDAEIILRNAVKYGPNHAEN YIALATLLALKHDFNGAREYFNTAEKLDAIMHNNSQRIKQFIECFEPLDADITRLFSL VKYMLKEIKEVNKLRQEITQYQTKIIQKQVPLASRYTANDHKSKADLLKRYQYCSTRK SGEGQEHVLFCDFYSDLQMQLESKQFDAELLDWQVNRYIATLFEKLPFEYKKHLELLY NKAIAITTETKNAYAM" misc_feature 702..782 /gene="LOC106094325" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature order(705..710,717..722,726..728,801..803,816..821, 828..833,837..842,909..911,918..923,930..935,942..944) /gene="LOC106094325" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 738..>1244 /gene="LOC106094325" /note="Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Region: Spy; COG3914" /db_xref="CDD:443119" misc_feature 795..893 /gene="LOC106094325" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 906..986 /gene="LOC106094325" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" polyA_site 1667 /gene="LOC106094325" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggttcttatc agcatattta ataaatataa ataatagggt gttatatata attttataca 61 tagtatcata caaacatata aaagcaatgc ttaattctag gtttattttg gttttacttt 121 ttccaagttt ttataagatt ttggcttcaa atcactatgc tcttaagctg ggagagagtt 181 ttattaagag gcgtttagat tcaccgttcc atctgagaga tccttgtgac cttcccactt 241 ttttagagca gattcgtaac aatgatagcg cagaagaagc ttttaggaaa atgcagcgta 301 agcgaagtaa attggatgac cacctattaa taactgcgca acttttacaa aacattcttg 361 agcgttctaa atgtgcccgc gtttatatca aaatgactgg gttgagtgac tatctccgga 421 ctacgggagc ctcaatgaag cgtcttgagt ttcccgaaaa acttgaaaaa gacgccaagg 481 atggcgaacc aatatgtaca atttatgcaa atttggattc acagagggat acttatggga 541 atttgcagtg ctttagcaag gagtttgtcg atacgatgaa tattgagaag gaagagaatt 601 tattgaaact tgaattggga ctaaaagatg ccgaaagtgt cactgaaatt atatacagtg 661 tagcaataaa gggactttta aacaacccca catcttggaa atttcatatg ttaggctcct 721 attattggag attggttggt aatgcaaaaa atgctttgga ctgtgctcga ttgtccgtgc 781 atttagcgcc tgaagaacat aaagacattc ctctgctaag tctgggaaca attttagtgc 841 gggctgaagt ttgggatgac gctgaaatta tactaagaaa cgccgtaaaa tatggaccca 901 atcatgcgga aaactatata gccttagcca cacttctagc attaaaacac gattttaatg 961 gtgcgagaga atattttaat actgcagaaa aacttgatgc cataatgcac aataactcgc 1021 aaaggataaa acagtttata gaatgttttg aaccgttaga tgctgacata accagactct 1081 ttagtctagt caaatatatg ctgaaagaga ttaaagaagt caataagctt aggcaggaaa 1141 taacacaata tcaaacaaaa attattcaaa aacaggtacc tttggcgtcg cgttatacag 1201 caaacgacca caaatcaaag gcggatcttt taaaacgtta tcaatactgc agtacaagga 1261 agtcaggcga aggacaagaa catgtcttat tctgtgattt ctactcggat ctacagatgc 1321 agttggaaag taagcaattt gacgccgaac tattagactg gcaggtgaac cgatatatag 1381 ctaccctatt tgaaaaacta ccgttcgaat ataagaaaca cttagaatta ctgtacaaca 1441 aggccatagc aataacgact gaaacaaaaa acgcctacgc tatgtaacgt aatgtaagtt 1501 aacgcttatg cgcatctttt gcttattttt aaaacaggtc gttttgatac tcattaccat 1561 tgaataggcg gtgttctaat ctcgtcattc cgcttgtaat agctcaataa gttgatctac 1621 gtcataatga agtgtatata tttttcttga tcgtcttgac aatccaa