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LOCUS XM_013260568 2055 bp mRNA linear INV 02-SEP-2023 (LOC106093506), mRNA. ACCESSION XM_013260568 VERSION XM_013260568.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260568.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2055 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2055 /gene="LOC106093506" /note="negative elongation factor B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106093506" CDS 111..1877 /gene="LOC106093506" /codon_start=1 /product="negative elongation factor B" /protein_id="XP_013116022.1" /db_xref="GeneID:106093506" /translation="MAQPPKFTGTGLEEVNIPGQAYLREALTSCTDPLKAIESFQLEN GVLLPSLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINELGQKDPRERDKKLKEL LIKSFPVVRVKALRPVVMAILRNTPHIDDKYLRILVRDRELYADTDTEVKRQIWRDNQ SLFGDEVSPLLSQYIREKEHILFDHTNLNNLFFHPSPKVRRQGEVVQKLANMIGRSVK LYDMVLQFLRTLFLRTRNVHYCTLRAELLMALHELDVQEIISVDPCHKFTWCLDACIR EKNVDIKRSRELQGFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILQHLINNE GLPRDNTILILLLRMLALGLSAWVMIDSQDFKEPKLDSQVVTKFLPALMSLMVDDQCR SLHSKLPPDERESALTTIEHSGPAPDAVEAYIQESSVASILAMYYTLNTARQKDRVGV LRVLAILSSCKDDRSYEDPFLHSLIALLIPMAEEFTTEDFCTTLFDEFLFAGLTRDNV TRHMIKLLWYVHNKLPSGRLATLMKAMQPTAGHNEAVHKLYETLQERTSLQECPAPTE QTEVDFDSPLKSVPTPGPHYMQ" misc_feature 447..1487 /gene="LOC106093506" /note="Cofactor of BRCA1 (COBRA1); Region: COBRA1; pfam06209" /db_xref="CDD:461851" polyA_site 2055 /gene="LOC106093506" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttatgttttt ctcgtagctt tgacgttttg gaacgccgcc gtgtagccga tgatagaaaa 61 ttagttgatt ttattcgttt ttgttaaaat cgaaattgct ttaactgaaa atggcacagc 121 ctccaaagtt taccggcacc ggcttggagg aagtaaatat tcctggtcaa gcatatctga 181 gggaggcatt gacttcttgc accgaccctt taaaggctat tgagagtttt cagttggaaa 241 atggtgtttt acttccctcg ttgcggccca tgctgccgtt gttggatttg catggtgtac 301 gtcgtttaga ttttcacacc tctttgatgg aggagttgcg agacaaattg atagcccaca 361 taaatgaatt gggtcaaaaa gatccacgcg aacgtgacaa gaaactaaag gaacttttga 421 taaaaagctt ccctgtggtt agagtcaaag cccttcgacc agtggttatg gccattttgc 481 gtaatactcc tcacattgat gacaaatatt tacgcatttt agttcgagat cgtgaactgt 541 atgctgatac ggatactgaa gtgaaacgac aaatttggcg tgacaatcaa tccttgtttg 601 gcgatgaagt atccccacta ctgtcgcaat acatacggga aaaagagcac attctttttg 661 accacacaaa tctcaataat ctatttttcc atccttcgcc caaggttaga cgtcaaggag 721 aggtagtgca gaaattggcc aatatgattg gccgcagtgt aaaattgtat gacatggtac 781 tgcagttttt gagaacatta ttcttgagga cccgtaatgt gcattactgt accttaagag 841 ctgagttgct tatggctttg catgagcttg acgtacaaga gattatatcg gtggatccgt 901 gtcataaatt cacatggtgt ttagacgctt gcatacggga gaaaaatgtg gacatcaaac 961 gttcccgaga attgcaaggc tttcttgata acataaagag gggccaggag caagttctag 1021 gtgatctttc tatgacactg tgcgacccat atgccattaa tttcttagcc acatcggcaa 1081 ttaagatatt acaacattta atcaataacg aaggattgcc gcgtgacaac actatactca 1141 tcctgttgtt gcgaatgctg gctttgggct tgagtgcatg ggttatgatt gattcacagg 1201 atttcaaaga gcccaaattg gattcacaag tagtaacgaa attcctgcct gcgctaatgt 1261 ccttaatggt agatgatcaa tgtcgcagtc tacattccaa attaccgccc gatgaaagag 1321 agtcggcact gactaccatt gagcattctg gtccggcacc agatgcagtc gaagcttaca 1381 tccaagaaag ttcggtagct agtatattgg ccatgtatta cacattgaat acagctcgtc 1441 aaaaggatcg tgtaggtgtt ctacgagttc tggcaatatt atcatcctgc aaggatgatc 1501 gatcatacga agatccattt ttacattcac tgattgcatt gcttattcct atggctgagg 1561 agtttacaac cgaagatttt tgtacaactt tatttgatga gtttctcttt gccggcctta 1621 ccagagacaa tgtaaccaga catatgatta aattattgtg gtatgtacat aataaattac 1681 cctctggacg tttggcaaca ttaatgaaag ccatgcagcc cacagctggc cacaatgaag 1741 ctgtccataa actgtacgag acactacaag aacgaacatc tttacaagaa tgtccagcac 1801 cgaccgaaca aacagaggtt gatttcgatt caccacttaa gagtgtcccc acccccggtc 1861 cacattatat gcaatgaaaa gtttattccc atccaaaaca gacccattaa taataataca 1921 aaaaaaatgc atcatcactc caagtacatt aatatgaaat gtaatgtttg atgtataatt 1981 tttctgattt attatattat tacatttttt cattcaaaaa ttccaaatat aaatattact 2041 tatatacaat acaaa