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LOCUS XM_013260362 3750 bp mRNA linear INV 02-SEP-2023 (LOC106093310), transcript variant X2, mRNA. ACCESSION XM_013260362 VERSION XM_013260362.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260362.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3750 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3750 /gene="LOC106093310" /note="RING finger protein 141; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106093310" CDS 198..980 /gene="LOC106093310" /codon_start=1 /product="RING finger protein 141 isoform X2" /protein_id="XP_013115816.1" /db_xref="GeneID:106093310" /translation="MGQAHSLADSLPDVDSVHMQLVRHTKVLSEINSLTYEEFKTCLG NLNALSRKCIDPNGKQLVFLVKSGTDTSLLWKATVKIACVKVNPETRQIDSYKFLNLK QFLCVFKTFQAHLESLEQRRDSQSTPEDEEPSRCSSSQLHPLPSQFTTSMFMGALGNS TDSTGGGSGLSSPSVSTCVHNDHIDECSICLDRQTEVILPCTHSFCTPCIEQWNVNNK TCPICCETLESTDETWVMSNIPEVEEINEEICAGFMNLAKEQ" misc_feature 750..866 /gene="LOC106093310" /note="RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins; Region: RING-HC_RNF141; cd16545" /db_xref="CDD:438207" polyA_site 3750 /gene="LOC106093310" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caaattgcaa catactgaga aagtatagag caaccgcata tgtttattgt tttgatacgc 61 aaacagaact gagtcgtaag tggaaaatat gggattgtga aggtgccgca ggatacacac 121 aactgaaagg attttgttct acgaattgcc aaaagtgaaa ttattattat aagctactac 181 actacactgc aaaagccatg ggtcaagccc atagtttggc agattccctg ccggatgttg 241 atagtgttca catgcaattg gtgcgtcaca caaaagtttt gtcagaaatc aattccctga 301 cctatgagga attcaaaact tgcttgggaa atttaaatgc gttatcccgc aaatgcatag 361 accccaatgg taagcaactg gtgtttttgg tgaaaagtgg cacggacaca tctctattgt 421 ggaaggcaac tgtgaagata gcctgcgtaa aagttaatcc cgaaacacga caaatcgatt 481 catacaaatt tctaaatctg aagcaatttt tgtgtgtttt caaaacattc caagcccatt 541 tggaaagtct ggagcaaaga cgtgattctc aatcaacacc agaagatgag gaaccgtctc 601 gatgttcttc gtcacaacta catccactac catcacaatt cacaacttca atgtttatgg 661 gtgcattggg taatagtaca gatagtacag gtggaggcag tggcttaagc agcccctcag 721 tatcgacatg tgtccataat gaccacatag atgagtgttc aatatgtttg gatagacaaa 781 cagaagtaat cctgccctgt acacactcct tctgtactcc atgcatagaa caatggaatg 841 ttaataacaa aacttgtccc atatgctgtg aaactttgga aagtacagat gaaacatggg 901 tgatgtcgaa tataccagaa gttgaggaaa tcaacgaaga aatatgcgct ggatttatga 961 atttggccaa agagcaatag agaattacaa cagttgttct tgtcctctca ataaaatgac 1021 aagtttacta atagtacaac ctacctatga gcaatttggc aataatattc aagttttcaa 1081 agactggata acatcaatgg tatttttaat atatgtaaat ggttttttaa aaaagcaaaa 1141 ggccctattt cacataatca tgacattatg gtttaaagcc ataacctaca tatttttaaa 1201 ttttataccc atttcgacat tatataaatt atttgtatga atcttggaaa taaacaaagg 1261 caatttaaaa ccacacaggc agagataaaa aggcgttggt caaaattgac ggcttcgact 1321 atcagtgctt ctctaaaaca acttctcttg gtgtctagtt tatatgccaa aatatacgaa 1381 aatgtatgct atatttcaaa aataatatct tacttatgag aagatttgta ctgaggccaa 1441 agcttagaag aatattgagt tttgggaaaa atataaagaa tgcttctcct tttttattat 1501 tgtttcaagc tttataataa caaaaaattt ggtttgacta tgtatgtgat tattggccga 1561 acaacgaaat gtagccatat caacgtccaa ataggaattt tattcatctt agtatctcga 1621 tgtgaattat taatttagct aatcttttaa gtaaatgttg taagcttagg taaaacaaag 1681 taatttggta tccagtcaat gttttgttct aaatgtgtta cttctgtaaa ccctttgctt 1741 tataataatt attattttcc ctaatttaag aataaatctt gttaaatagt ttatagttat 1801 ataaaaaaaa attgtgaatc ttatataccc ttcatcctgt ggatcatgtt cggcaagttc 1861 tccatagtag ttgccaagtc agtataaacg gtttctccta ataaacaagt tttagatgca 1921 taatttgatc aagcatgatg cttccaactt tccctcttac ataacgtttt tcctttttat 1981 tagaattcca catcactgat aattttttta tatcctacac aaccactgcg gtactgggtg 2041 ttattatcta gtccatttgt ttgtagcagt caaaaggaga agaggggcac caacccattg 2101 attgttatat cgatcgtctc tgaatcactt cccgaaacga tttttttatt tattttctaa 2161 atgttgttat tttaatggct cgattatgga tgccaactaa catgcagttg aaatgtcatc 2221 tgacacgcaa ccaaaataaa aaagctaaaa gttatgaaat ttccaaaaaa aaaacaaaaa 2281 aaaacaaaaa aaatattttt aattaaagca ctgttaaaga attttttcat gtaaatgttc 2341 attttgtgtc gccgtttggt gccaaaattt ctttaagact taagaacttg tctattgaat 2401 ttagatccat gttaatttcc tgcgtattct tggtccacaa catgctttgt taagatttct 2461 tatgttaagt ggcaatttta tttttatctt gctttaaaat atcttcacac caccaactat 2521 tctcccggct atgttttttt gtttcaacaa ctggcacaac acgagcagca tttgggtttt 2581 ccccatttat tcttaaatta cgaattgttg atttgtggcg ctttgaccac ggtgaagctt 2641 aaaacaccta ctcatatgtt atatagaaac aaacgaacaa tttatactaa acctgacaga 2701 tctactattt cctgcacgtg atgactatga gcaccacaca gtctagaact ttgagctccg 2761 atctatgtcc atcgtcacca cgagaagctc atatgagggc tacggcatcc acaggtggca 2821 gatcgggaat gttcaatacg gaatagctgc aactgcagtc gcggacaatt agcggtatcg 2881 agtggagtat cagagaaagg cagggcggca acggctcttg catgaatact gagtatgaca 2941 aggcaagcta ttggatcctt taaataacca atggccataa cgttcccgta gctaccggtc 3001 gtatggaccg gaacgaactt gctcaacgat aagagctaga caaggattgc tacctccaca 3061 tacaaatgtg gctacaacaa cggagcaact acaaaaaagt ggttgccgaa aaatcgcact 3121 tatagcaact tcagttgaat gtcatccgta atgtatattt ttcaactagc aatcatataa 3181 aataatattt tttcttaata atatttttaa gaaaaaatag tttttttata attttttttt 3241 cataagatga actgttaatc aattctaaat gtataacaat aaaatatttt ataaaagcta 3301 aatattttat tgaatgattt gtccccaaaa tttgataatt aaccctatac ttttaaagta 3361 aatggcacaa aacttgaaaa ttaatttata ctaactagaa ttatttctgt tccataaagt 3421 aataacttgt ttttttgatg tcttggacac atctatggtg catggagtcc caataagatc 3481 ctggcatctc tctacagggt gatcctggga tagctttaaa cggattttgt gtctggcttt 3541 acacattgcg ttcaatggct attccgcatt tggaatttag ttctctttaa cataatatca 3601 atgtctcccc atgttcaatg ggattgagga caggaaactg agcaggtcac agcttaatct 3661 gaaccccatt gacccgaaac cacccctttc caatttacta gtatgtttcc gatcattatc 3721 ttgttagaat gccaatgtca gaatcatatt