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LOCUS XM_013260361 3770 bp mRNA linear INV 02-SEP-2023 (LOC106093310), transcript variant X1, mRNA. ACCESSION XM_013260361 VERSION XM_013260361.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260361.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3770 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3770 /gene="LOC106093310" /note="RING finger protein 141; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106093310" CDS 197..1000 /gene="LOC106093310" /codon_start=1 /product="RING finger protein 141 isoform X1" /protein_id="XP_013115815.1" /db_xref="GeneID:106093310" /translation="MGQAHSLADSLPDVDSVHMQLVRHTKVLSEINSLTYEEFKTCLG NLNALSRKCIDPNGKQLVFLVKSGTDTSLLWKATVKIACVKVNPETRQIDSYKFLNLK QFLCVFKTFQAHLESLVSSEIQREQRRDSQSTPEDEEPSRCSSSQLHPLPSQFTTSMF MGALGNSTDSTGGGSGLSSPSVSTCVHNDHIDECSICLDRQTEVILPCTHSFCTPCIE QWNVNNKTCPICCETLESTDETWVMSNIPEVEEINEEICAGFMNLAKEQ" misc_feature 770..886 /gene="LOC106093310" /note="RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins; Region: RING-HC_RNF141; cd16545" /db_xref="CDD:438207" polyA_site 3770 /gene="LOC106093310" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaattgcaac atactgagaa agtatagagc aaccgcatat gtttattgtt ttgatacgca 61 aacagaactg agtcgtaagt ggaaaatatg ggattgtgaa ggtgccgcag gatacacaca 121 actgaaagga ttttgttcta cgaattgcca aaagtgaaat tattattata agctactaca 181 ctacactgca aaagccatgg gtcaagccca tagtttggca gattccctgc cggatgttga 241 tagtgttcac atgcaattgg tgcgtcacac aaaagttttg tcagaaatca attccctgac 301 ctatgaggaa ttcaaaactt gcttgggaaa tttaaatgcg ttatcccgca aatgcataga 361 ccccaatggt aagcaactgg tgtttttggt gaaaagtggc acggacacat ctctattgtg 421 gaaggcaact gtgaagatag cctgcgtaaa agttaatccc gaaacacgac aaatcgattc 481 atacaaattt ctaaatctga agcaattttt gtgtgttttc aaaacattcc aagcccattt 541 ggaaagtctg gtgagcagtg aaattcaaag ggagcaaaga cgtgattctc aatcaacacc 601 agaagatgag gaaccgtctc gatgttcttc gtcacaacta catccactac catcacaatt 661 cacaacttca atgtttatgg gtgcattggg taatagtaca gatagtacag gtggaggcag 721 tggcttaagc agcccctcag tatcgacatg tgtccataat gaccacatag atgagtgttc 781 aatatgtttg gatagacaaa cagaagtaat cctgccctgt acacactcct tctgtactcc 841 atgcatagaa caatggaatg ttaataacaa aacttgtccc atatgctgtg aaactttgga 901 aagtacagat gaaacatggg tgatgtcgaa tataccagaa gttgaggaaa tcaacgaaga 961 aatatgcgct ggatttatga atttggccaa agagcaatag agaattacaa cagttgttct 1021 tgtcctctca ataaaatgac aagtttacta atagtacaac ctacctatga gcaatttggc 1081 aataatattc aagttttcaa agactggata acatcaatgg tatttttaat atatgtaaat 1141 ggttttttaa aaaagcaaaa ggccctattt cacataatca tgacattatg gtttaaagcc 1201 ataacctaca tatttttaaa ttttataccc atttcgacat tatataaatt atttgtatga 1261 atcttggaaa taaacaaagg caatttaaaa ccacacaggc agagataaaa aggcgttggt 1321 caaaattgac ggcttcgact atcagtgctt ctctaaaaca acttctcttg gtgtctagtt 1381 tatatgccaa aatatacgaa aatgtatgct atatttcaaa aataatatct tacttatgag 1441 aagatttgta ctgaggccaa agcttagaag aatattgagt tttgggaaaa atataaagaa 1501 tgcttctcct tttttattat tgtttcaagc tttataataa caaaaaattt ggtttgacta 1561 tgtatgtgat tattggccga acaacgaaat gtagccatat caacgtccaa ataggaattt 1621 tattcatctt agtatctcga tgtgaattat taatttagct aatcttttaa gtaaatgttg 1681 taagcttagg taaaacaaag taatttggta tccagtcaat gttttgttct aaatgtgtta 1741 cttctgtaaa ccctttgctt tataataatt attattttcc ctaatttaag aataaatctt 1801 gttaaatagt ttatagttat ataaaaaaaa attgtgaatc ttatataccc ttcatcctgt 1861 ggatcatgtt cggcaagttc tccatagtag ttgccaagtc agtataaacg gtttctccta 1921 ataaacaagt tttagatgca taatttgatc aagcatgatg cttccaactt tccctcttac 1981 ataacgtttt tcctttttat tagaattcca catcactgat aattttttta tatcctacac 2041 aaccactgcg gtactgggtg ttattatcta gtccatttgt ttgtagcagt caaaaggaga 2101 agaggggcac caacccattg attgttatat cgatcgtctc tgaatcactt cccgaaacga 2161 tttttttatt tattttctaa atgttgttat tttaatggct cgattatgga tgccaactaa 2221 catgcagttg aaatgtcatc tgacacgcaa ccaaaataaa aaagctaaaa gttatgaaat 2281 ttccaaaaaa aaaacaaaaa aaaacaaaaa aaatattttt aattaaagca ctgttaaaga 2341 attttttcat gtaaatgttc attttgtgtc gccgtttggt gccaaaattt ctttaagact 2401 taagaacttg tctattgaat ttagatccat gttaatttcc tgcgtattct tggtccacaa 2461 catgctttgt taagatttct tatgttaagt ggcaatttta tttttatctt gctttaaaat 2521 atcttcacac caccaactat tctcccggct atgttttttt gtttcaacaa ctggcacaac 2581 acgagcagca tttgggtttt ccccatttat tcttaaatta cgaattgttg atttgtggcg 2641 ctttgaccac ggtgaagctt aaaacaccta ctcatatgtt atatagaaac aaacgaacaa 2701 tttatactaa acctgacaga tctactattt cctgcacgtg atgactatga gcaccacaca 2761 gtctagaact ttgagctccg atctatgtcc atcgtcacca cgagaagctc atatgagggc 2821 tacggcatcc acaggtggca gatcgggaat gttcaatacg gaatagctgc aactgcagtc 2881 gcggacaatt agcggtatcg agtggagtat cagagaaagg cagggcggca acggctcttg 2941 catgaatact gagtatgaca aggcaagcta ttggatcctt taaataacca atggccataa 3001 cgttcccgta gctaccggtc gtatggaccg gaacgaactt gctcaacgat aagagctaga 3061 caaggattgc tacctccaca tacaaatgtg gctacaacaa cggagcaact acaaaaaagt 3121 ggttgccgaa aaatcgcact tatagcaact tcagttgaat gtcatccgta atgtatattt 3181 ttcaactagc aatcatataa aataatattt tttcttaata atatttttaa gaaaaaatag 3241 tttttttata attttttttt cataagatga actgttaatc aattctaaat gtataacaat 3301 aaaatatttt ataaaagcta aatattttat tgaatgattt gtccccaaaa tttgataatt 3361 aaccctatac ttttaaagta aatggcacaa aacttgaaaa ttaatttata ctaactagaa 3421 ttatttctgt tccataaagt aataacttgt ttttttgatg tcttggacac atctatggtg 3481 catggagtcc caataagatc ctggcatctc tctacagggt gatcctggga tagctttaaa 3541 cggattttgt gtctggcttt acacattgcg ttcaatggct attccgcatt tggaatttag 3601 ttctctttaa cataatatca atgtctcccc atgttcaatg ggattgagga caggaaactg 3661 agcaggtcac agcttaatct gaaccccatt gacccgaaac cacccctttc caatttacta 3721 gtatgtttcc gatcattatc ttgttagaat gccaatgtca gaatcatatt