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LOCUS XM_013260329 6242 bp mRNA linear INV 02-SEP-2023 (LOC106093277), mRNA. ACCESSION XM_013260329 VERSION XM_013260329.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260329.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6242 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6242 /gene="LOC106093277" /note="E3 ubiquitin ligase Rnf157; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106093277" CDS 192..2504 /gene="LOC106093277" /codon_start=1 /product="E3 ubiquitin ligase Rnf157" /protein_id="XP_013115783.2" /db_xref="GeneID:106093277" /translation="MGAFTSRQQNEQEAEQNANTHAYKYPPRSGNNFFGSHFIMGGER FDTPQPESYLFGENADLNFLGNRPTAFPYPPPQANEPTKTLKSLVNIRKESVRFVKVT KEKQVEVDQHDGNCLSGEALDPPPCLYNIEFTFDSDAKCAITIYYFCSEEVSPSGVTL TPRDGLTSETYHYEKGINQYFSQPSHVFNPQLIPEDDLIYNPSKEQYPVAIHCVVEEG NEDYRQSHTTILCIDHHPESNSYVLRALKQKIFVDGLCYLLQEIYGIENKAINKSSID EDLDDHGSECVICMSETRDTLILPCRHLCLCYSCADSLRYQANCCPICRAPFRALLQI RAVQKGVNNHVLHQNTPTSAAGEPLACEHQVPAGFIPVSLIEALNGPPQYVGTRRGVG DGNDMIDGSGAIINGTSSEHHKATSPYKPSSQRRSKGKKNASTSTNSKEMSTMTNNAT QSNGGKDNDNDESVVDGKSVDKRSSQDKLQIVNERHSLKVPKSSHKRHSKSTPNPEMT STATSMHDEVEDDSENEKLSPLLSPGSKCKPIPHQLSKTLSTTSDNDDVDADEEEEQN SMISEPKVEFKTKKSTSFKKHKKAVDNKLSTLNINNGASEAIAVMPVVTSNTVMPQAA TAKAMGEDTDYYTPEDGQNGILSPLCPDKSKTISGAGEKLKSSLAKKNLHKKSTSVGN IVGSGASGVGGATACSTGAVDMKGNNVSSLPDMLDSPVSATSASTRSSSDSYSSSSST KQLLSSNPNTAAAANIIVDDKTSLQNAVNV" polyA_site 6242 /gene="LOC106093277" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gggctaatgt aaggacctct tcgattgatg ttttcatttt tgtgctgtgt taaattaaat 61 taaagttctt tgcatttgat ttgaacattt atacgagata ttaaatgcat ttggtttgga 121 tgggtgtaat ctaaaagtgg tttaaacttc aatgatatcg gaatccctcc ttagagacat 181 cgattaataa aatgggtgca tttacaagtc gtcaacaaaa tgagcaagaa gcggaacaaa 241 acgccaacac tcatgcatac aagtaccctc ctaggtcggg aaataatttc tttggtagcc 301 atttcattat gggaggcgaa cgatttgata ctccccaacc agagtcatat ttgtttggtg 361 aaaatgctga cttgaatttt ttgggtaacc gcccgactgc atttccatac ccgccgcccc 421 aggccaatga accaaccaag actttgaaga gtttggtcaa tatacgcaaa gaatcggtcc 481 gttttgtgaa ggtgacaaaa gaaaaacaag ttgaggtaga ccaacatgat ggcaactgct 541 taagtggaga ggccttggat ccgccgccat gtttgtacaa cattgagttc acatttgact 601 cggacgcgaa atgcgcaatt accatatatt atttttgcag tgaagaagtt agccccagtg 661 gggtaacact tacccctcgt gatggcttga cttcggaaac gtatcactac gaaaagggca 721 tcaatcagta tttttcccaa cctagtcatg ttttcaatcc ccagctaatt ccggaggatg 781 atttgattta caatccaagc aaggaacaat atcctgtagc tatccattgt gtagttgaag 841 agggtaatga ggattatcgg cagagccata caacaattct ttgtattgac catcatccgg 901 aaagcaatag ctacgtgttg cgggctttga agcagaaaat atttgttgat ggtctgtgct 961 atctgttgca ggaaatctat ggcattgaga acaaggctat taataagagt tccatcgatg 1021 aagatttgga tgaccacggc agtgaatgtg ttatttgcat gagcgaaacc cgtgacacac 1081 tgatattgcc ttgtcgtcat ctatgcttgt gttactcttg cgctgattcg ctacgttatc 1141 aggcaaattg ttgtcccata tgccgagctc ctttccgggc attgctgcaa ataagagctg 1201 ttcaaaaggg tgtaaataat catgttttgc atcagaacac tccgacttcg gctgctggtg 1261 aaccattggc ctgtgaacat caggttccag ctggatttat accagtgtcc ttgatagagg 1321 ctctgaatgg accaccacaa tatgttggca ctcgtcgtgg tgtgggtgat ggaaacgata 1381 tgatagatgg cagtggggct attatcaatg gcacatcttc ggaacatcac aaggccacat 1441 cgccatataa gccatcttca cagagacgct caaagggcaa aaagaatgct tcaacttcca 1501 caaattccaa agaaatgtca acaatgacta ataatgccac tcaatccaat ggtggtaagg 1561 acaatgacaa tgatgaaagt gttgtagacg gaaaatcggt cgacaagcgt tcttcccaag 1621 acaaactgca aattgtgaat gaacgccata gtttgaaggt accaaaatcg tcacataagc 1681 gccattccaa aagcacaccc aatccggaaa tgacatctac agccacatcc atgcatgacg 1741 aagttgaaga tgacagtgaa aatgaaaagc tatccccttt gctttcacca ggtagcaaat 1801 gtaaaccaat tccacaccaa ttatcaaaaa cattatccac aacatcagat aatgatgatg 1861 tcgatgcaga tgaagaggaa gaacaaaatt ctatgatttc tgagcctaaa gtagaattta 1921 aaacgaagaa aagtacatca ttcaagaaac acaagaaagc agtcgacaac aaattatcaa 1981 ctttgaatat aaataatgga gcttcggaag cgatcgcagt aatgcctgtc gttacaagca 2041 atacagtaat gccacaggcc gcaactgcca aagcaatggg agaagatacc gattattata 2101 ccccagaaga tgggcaaaat ggaattttaa gccccttatg tccagataaa tcgaaaacta 2161 tatccggagc tggggagaaa cttaaaagtt ctttggcaaa gaagaattta cacaagaaat 2221 ctacatcagt gggaaatatt gttggttctg gagcatctgg agtggggggt gcaacggctt 2281 gttcgacggg agctgttgat atgaaaggaa acaatgttag ttctttgcct gacatgctgg 2341 acagtcctgt gagtgcaacc tctgcctcta cccgaagttc cagtgacagt tattcatcga 2401 gttcatcaac aaaacagctg ctaagttcaa atcctaacac cgcagctgca gcaaatatta 2461 tcgtcgatga taaaacatct ctacagaacg cagttaatgt ttagacccac atacatacgt 2521 atatactcga tttttagact aatctacaca tttatatgca ctattaatgc attgatctta 2581 taaagataag tacatttgtt gattgttttt gtgtatgtca tcgatggagt tgctttacta 2641 tccatatcat tatcagactt tcattgcttt cttcacattt ggataatttt tgttttaatt 2701 tgtggtctct caaaacgaag gagaaatgct acagtcttcg aaagtctgct ttgttagtgc 2761 aatacgtcgc atacagcata atgctccaca ataatactta aaatatcaga cagaaaaaaa 2821 gcactcaaaa taaattagcc aaagagctct cggttaacga tttggacaaa cgaaacgaag 2881 aactgaagac tcatgtttcc tgctaaacat agttgttttc aaaaaaatat taagaacaaa 2941 aatgttggct ctctaagaaa gcagaaagtc tcaatgcact aggcaaaaac gcaactacca 3001 gtaggagagg aggctgtctg aaactcttat gttcaatgtg tcctctattt acaatttggg 3061 tctaaatcgt gttgctccca attggtgtct caccttaatc ctctcgttaa cctggcctga 3121 attggctgac tgaacagtgc tctcaaatgt cagaatttct cccaggtccg tctggttccc 3181 tatttttccc cttctatcgt ttctgctacc ttttgcacct tactatgtat ggtatatggc 3241 tatctgcttt ctttgtcttc cttttctctt ttgcattatt ctaggatgaa aagagaaggc 3301 tttagttttt gagttttatt gaaaataaat caccagatca ttagacatat gccttgcaac 3361 caccggtaga cgtttcggag ttggctgggc tccattctca aaacacttga cttgtcgtgg 3421 ctcccggtta tgtaaacata tgtttgctgc atttaacata tgaaaagcag acatccacag 3481 agattcatac tggtataata tctcggacga atattttgtg tgcagtttaa taaagtttct 3541 ggatagtgct ccatacatac aaatttaact atttgttatt atatacgact tatttttttt 3601 ttttaatttt atatttacaa ttttcttttt gtctgtctca acaattggct ttggtgattt 3661 tccttagttt ttaagcttaa ataaaacagc atttgcaact aagaactttg aagtctcaca 3721 tgtttattgt acagtgcttc ccaaaacatt tacaaccacc agagaaaaag aagaattgta 3781 atatacatgg cttggttaaa ggacactcgc ctggcaacaa cagtagtcaa ccacttcact 3841 aggagatctc tggtttattg tgttcggctt agaaacaaat aaaataagag agagacgaaa 3901 gctggtagga aacgacaaag ataaacataa agccgtcata gagacagaaa aaagtctcac 3961 cgtctagaga accgcctcgt cagccatgcc aggtccttac agaagtccag agtgactcgg 4021 aggtcaaaag actgcagaaa gctcagttaa gagaagaggt aaattgcaaa ttttgcccat 4081 gaacattcca ctaaaaaaca gtggcaaatt tctcacatat caataagtgc agtccgattc 4141 aagtttaagc tcaatgaaaa ggggcctcct ttttttagcc gagtccgaac ggtgtgccac 4201 acctctttgg agagacgttt ttacatggca tagtacctca cacaagttgt cagctaacct 4261 ctgcgctacg atggcgatga gaagaggtgt ttacccataa ttccatgcct tctcccagcc 4321 attgcagtgc attagcacaa caggtgctcc accgtctcca actccccctc atccccacag 4381 accctggaga aaaccaccgc gcataatcca aggtagcgct tccgaaatcc tcgttccggt 4441 gaaaccccgg tcacagggcc ttgataaccc tgcaccactc aacaccagcc ctcgcccagt 4501 atgcgccttt gccgttgaag gcatccacca tttcaatggc agccggttgt acgtaccgga 4561 ttgacacgat ggattccttc atcggcaaag gctgccgcct cagtgtacaa cactgctaca 4621 acaacaacaa ccattccaaa tagcctactc agaggagggc tcaacatcgg cgtagcccag 4681 ctgctatcca aatctggccg gcacatcggc ccggaaccca gcacgatctg acagcagccc 4741 ccgcagccag gaccttcacg ataactgact gtccacataa attgtgacag tcccagaggg 4801 ccgcaggtct tggctcagga tcacatccaa atacttcagc ctgaaagaca catcacccgt 4861 tctcgaatac tgagtaccta tgatgctcga tatgacaagg cgagttaatt gcgcatttaa 4921 ataagcaatg gccaccctgt tcccgcggcg atcggtcctt tggaccggaa cgaacttgct 4981 cacctacaga aatttgacga ggatcgccac caccgcatga aaatgtggct acaacgacga 5041 agaatatggc aacgtcatca gcatgggcaa ccatcttcac tcattcctcc ctgaaggacc 5101 tgagaatacc attgacaacc aagagccaca agtgaggtca tagcttggca gttgttgttg 5161 ttttatgttg ttttagcagt gtgttataca ctgaggcggc agcccttgtc gatgaagctc 5221 catcgggtca atccggtacg tacaaccggc tgccatggga ttgatagctt ggcagtagtc 5281 cgcctcagtt tcccattcga ccaaacaggc tgcgacccct tatcttgaaa gtgcagttct 5341 cctcaaagtt gctcacaata gccaatgcta acgcgttcgc catcaactca agctcccttg 5401 tactaccaag tacggtgtta atggttcgaa gcattagatc gacgcgcttg acatggcagt 5461 ccaagtaata tacgtacatt tttttctcat gtaaaaagga actttgcaat gttgaaagaa 5521 ttcaactatt tcgatttaat tggcatttat tattattatt tttttttttt ttaattttta 5581 cttaacatag atacatcaat gccaatggac tcctacaata attgttcggg ctgcgaaaaa 5641 attttttttg tccgatttat atttaaatcc ttcaataaag tgcctcatgt atgaggatat 5701 ttcttatagt ttgcaagata taacccttgc aaactgtacc ggatcggtcc ataacctgat 5761 ttaccaatct ctcgatttga cttcttgagc ctctagaggg cgtcattatt atccgatata 5821 aatatatttg aaaaagtcat tcaaagaact tgtcacatgg cggtggccga acttttttag 5881 gtttttctga aacgtctgtg ggtgtatgca aatgttttga gcatcactgt atatatgagt 5941 tatatgcgtg tattatgtat attatttata aaactcttat attaaatgct tattacttgt 6001 cagtaaacaa aatattcaat aaacgttgtc tctatgtctt atatacttac ggtttgaaaa 6061 atataagttt gcttcatacc catttttttc acaaatcaca gcaaaccctt cgcatttcag 6121 ataatgaatg aacaagcaaa tccatgaaac aatatgaaca aacctataag cgtttaaatt 6181 aaaagaagta aataatgcaa ttaaataaaa tctattccac aactatacaa tatataaata 6241 aa