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LOCUS XM_013260295 6612 bp mRNA linear INV 02-SEP-2023 protein (LOC106093251), transcript variant X3, mRNA. ACCESSION XM_013260295 VERSION XM_013260295.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260295.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6612 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6612 /gene="LOC106093251" /note="polyhomeotic-proximal chromatin protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106093251" CDS 43..5541 /gene="LOC106093251" /codon_start=1 /product="polyhomeotic-proximal chromatin protein isoform X2" /protein_id="XP_013115749.2" /db_xref="GeneID:106093251" /translation="MPTRTTATRESENTTATSNSTYLPTQPLKDNSNIRIIKVNGEQA HLVEQKQQQHHHQSTSSPSTNNSSSSNNNNNNGVTANHLTTAKVGTSTPSTPKAANGG GGNERPLKCLETLAQKAGITFDEKYDFATPTASSPTPPQQQQQYHSSQNTTQQQQSNQ LKLQQQQQQHHHHQIQLANLRASSSTTTTSTTNTTPQAHTTSISIVGVGGNVPKSFKL EKSQSPAQQVAPGTVPLQISPEQLQQLQQLQQFHQLQHGPPFAAVQVKQEFPTQHHTL SAGGGGAADLKHTGMLDAATQGQLQQMQLAAAAADANGGVGPNSPANQQNANNGLQPQ HSTTISTMSPMQLATATGQVTAANDWTQGRLQIMQPSTSFIYPHLMLPGNLIHSSLGQ QPIQVITAGKTFQGGAPQIVATTQNAKQMSIAGNATFPSGTTYAIPSSQSQQTLLFSP VNVISQSPQQQNMLQVMTQAAANAQQQQQQQQQQQQQQQQQQQQQQKTVDGQKGLQQK VVQKVTTTTNTVQSAAAPNVGQQQQQQAQQQCVQVNSQTAAGMAGGATQIISPLQQTT GAPQPLQINATPWGVPFWSNGLQQLAQNQIIIRGTQPDGTQGVFIQQPTGPTLQAQQQ NQITLQCTQTPTKQRTQLDQLQAATKQQQATGQTHAQQVASAANTQMQVNQQQQQQAA NAAAVQQQQQQQAVVAAHLQQQAAVVAAANQRGTTQIMPQTGGAQIRPASSVSTQTAQ NQSLLKQKMRTKQQAVRPALTQMKTEQNTVQQVQQQVVKTQATTVAGLQQMTAAVAAQ QQQQGQPTVHQVVTSGGKQMVVMSAGTPITIQNGQTLQQAVDKQQQQQQQQQQLQLQQ IQKQQQQQQQVLLQQQLLQQQIAQIQLQQQQAVQQQQQQQLQQAAAVQQQQVGQAQQQ QAQIQLQVGSQAFITTQQQQQLQNQIMQQHQHLQQQHQHQQQQQQQQRDSQQQQQQQQ AQAGQNIIHQIVVAQSPQQQQQQQQQQQQAQQLQQQITAVPFSVSSSTPASIATSAGA AMQHVTYQTKTSNSLPTTSVVTISNQTGPLVTSTVGLSQTQLHQQQLIAATIAASQQQ QQQQLQQQQQQQLVAVAQQQQQQQQAQQQQAQQCQQQQTVMPPPSSPAQNPILAMASM MNAAAGGNLNTTSSLSGVANNTAVPMTSPLANSNASVTSVSSLPTTPSKSGADQIKNG SSAPSTPSTTTGGAGGQTNVHILSAPSTPALSSDAGTKDTPSKSNDLNRSADNATPTG TLHTMSMGGGGVNSQETDNLSNLPAPQAQVSPTIPSTNNLSMSGVQESSQMNLDATAP QPIDVIEEHNQQQNENSELKQSNDVQSTTQALSYTNNDSPSKSMKAPSSTTSSEAGEK STATLTANFVSTAPEEALATSVASSVAAVNTSTTASSMTTTPSSTTTSSTTTSCTSST TTSSTFTTTSTTNNSSSLISTPTTKSAVGPPPKTTPGATIVKVEKDLPKAMIKPNVLT HVIDGFIIQEANEPFPVSRKRYTDKDDSDELPQKKQALEDSTNNNGNNNTNALATSPL PPDMVACEQCGKAEHKTKLKKKRYCSPTCARQAKASMGGHEQQLQQQQQQQNQHSDNN GGVTAASLSLTNATNNDGTSTNVNNLSNSMSMDISQTLVTAATAPMVPVNVGMVDTPL VAAMPMMAAPTLAPAPVQLPMPAAAAAIMNDVVGGGGQQTANAQIAAIPTAAATMNVA PNTAATTAATAMMDQQQPQMANWTVADVCEFIKNLPGCTDYVDDFEQQEIDGQALLLL KENHLVNAMGMKLGPALKIVAKVESMKEVSAAALNAANNAANNSMDMQ" polyA_site 6612 /gene="LOC106093251" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatgtgaagt acaacttgta tgcgctccaa cactcaaatc aaatgccaac tagaactacg 61 gccacaagag aaagtgaaaa cacaactgcg acatcaaact ctacttattt gcccacacaa 121 cccttaaagg ataattccaa tataagaata attaaagtca atggtgaaca agcgcactta 181 gtagaacaaa aacaacaaca acatcatcat cagtcaacat catcccccag caccaataac 241 agcagtagca gcaacaacaa caacaacaac ggtgttaccg caaaccactt gacaactgca 301 aaagttggta cttcaacccc aagcacaccc aaagcggcaa acggcggcgg aggcaacgaa 361 cgacccctca agtgtttaga gactttggca caaaaggccg gtataacatt tgacgaaaaa 421 tacgattttg ccacgccaac agcatcatca cccacaccac cacaacaaca gcagcagtat 481 cattcatcgc aaaatacaac acaacaacaa caaagtaatc aactgaagtt gcaacaacaa 541 cagcagcagc atcatcatca tcaaatacaa ttagccaatt tgcgcgcatc atcctccact 601 accacaacct ccaccacaaa taccacccct caagcacaca ccacttccat ttccattgtt 661 ggtgtcggcg gtaacgttcc gaaaagcttc aagctggaga agtcacagag cccagcacaa 721 caagtggcac ccggtacggt gccactacag atttcacccg aacaactaca gcagctacaa 781 cagctacaac aattccatca attgcaacat ggcccaccct tcgcagccgt acaagtcaaa 841 caggagtttc ccacacaaca tcataccttg tcggcgggag gcggcggcgc agccgatctt 901 aaacatacgg gcatgctgga tgctgccaca cagggccagt tacagcaaat gcagttagcc 961 gctgcggcgg ctgatgccaa tggcggtgtt ggccccaata gcccggcaaa tcaacaaaac 1021 gcaaataatg gtctgcagcc gcaacattca accaccataa gcactatgtc acccatgcaa 1081 ttggccaccg ccacaggaca agtgactgca gcgaatgatt ggactcaggg acgcctgcaa 1141 atcatgcaac catctacgag tttcatctat ccccatttaa tgctgccggg caatctgatt 1201 cattcgagct taggtcaaca gcccatacag gtcattacgg cgggaaaaac ttttcagggt 1261 ggggctcctc aaattgttgc cactacacag aatgctaagc aaatgtccat tgcgggcaat 1321 gctacctttc ctagtggtac cacctatgcc ataccctcca gtcaatcaca acagacgcta 1381 ctattctcac cagttaatgt tatttcacaa tcaccgcagc aacagaatat gctgcaggta 1441 atgacacagg ctgctgcgaa tgcccaacag cagcagcagc aacaacaaca gcagcagcaa 1501 caacaacaac agcaacagca gcaacaacag aaaaccgtag atggtcaaaa gggtttgcaa 1561 cagaaggtgg tgcaaaaggt tacgaccacc acaaacacag tgcagtcagc tgcagctccc 1621 aatgttggcc aacagcagca acaacaagcc caacaacagt gcgtccaagt aaattcccag 1681 actgctgctg gtatggcggg tggagctact caaatcataa gtcccttaca acagactacg 1741 ggagcgcctc agccattgca gataaatgcc acaccatggg gggtaccatt ctggtcaaat 1801 ggtttgcagc aattggcaca gaatcaaatt ataattcggg gcacacaacc cgatggaacg 1861 cagggtgtgt ttatacaaca gcccacaggg ccgacgttgc aagcccaaca acagaatcaa 1921 atcaccctac aatgcactca aacacccacc aaacaacgaa cgcaactcga tcagttgcaa 1981 gccgctacaa agcaacaaca agccacgggg caaacgcatg cccaacaagt ggccagtgct 2041 gccaacactc aaatgcaagt caaccaacaa caacagcaac aagcggctaa cgctgctgca 2101 gtgcaacaac aacagcagca gcaggctgta gtagcagctc acttgcaaca acaagctgct 2161 gttgtggctg ccgccaatca gaggggcacc acacaaatta tgccccaaac cggaggtgcc 2221 caaatacgac cggcttcttc ggtttctacg cagacggctc aaaatcaaag tttgcttaag 2281 caaaaaatgc gcaccaagca acaggcagta cggccggctc tgacgcaaat gaaaaccgaa 2341 cagaatacag tgcaacaagt gcagcagcag gttgtaaaaa cccaagcgac caccgtggcc 2401 ggtctgcaac aaatgacagc ggctgtggcc gcccagcagc aacaacaagg acaacccaca 2461 gtacatcagg tggtcacgtc cggtggcaag cagatggtgg tgatgagtgc tggcacccca 2521 atcaccatac agaatggcca aaccttgcaa caggctgttg acaagcagca gcaacaacaa 2581 cagcagcaac agcaattgca gttacaacaa atacagaagc aacagcagca gcaacaacaa 2641 gttttgttgc aacagcaatt gcttcaacag caaatcgctc aaatccaatt gcaacaacag 2701 caggcagtgc aacagcaaca acaacagcag ctgcaacaag ctgcggccgt tcaacagcag 2761 caagttggtc aggctcaaca acaacaggcg caaattcagc ttcaggttgg gtcacaagcc 2821 ttcataacca cccagcaaca gcagcaattg caaaatcaaa ttatgcaaca gcaccagcac 2881 ttgcaacaac aacaccaaca ccaacagcaa caacagcagc agcagcgcga ctcccagcag 2941 caacaacaac agcagcaggc gcaagcgggc caaaatatca tacatcaaat agtggtggct 3001 caatcgccgc agcagcagca gcaacaacaa caacagcagc agcaggcgca acagcttcag 3061 cagcaaatca cagcagttcc cttctcggtg tcgtcttcga cacccgcctc tatagccacg 3121 tcggctggtg ccgccatgca acatgtgacg tatcaaacta aaacatccaa ttcactacca 3181 accacatcgg tcgtaacgat ttccaatcaa actggacctt tggtcaccag tactgtgggt 3241 ttgagtcaga cccaattgca tcaacaacag ttaatagcgg ctacgattgc tgcctcacag 3301 caacaacaac agcaacagtt gcaacagcag caacaacaac aattagtggc tgtggctcaa 3361 caacaacagc agcagcagca agcacaacaa caacaagctc aacaatgtca gcaacaacag 3421 acggttatgc caccaccatc atctcctgct cagaatccca tactagccat ggcctccatg 3481 atgaatgccg ctgctggcgg caacctaaat accacctcat ccttgagtgg tgtagccaac 3541 aataccgcag tccccatgac ctcacccttg gctaatagca atgccagcgt tacaagtgtc 3601 tcatccctgc ccactacacc ctcaaagagc ggtgcggatc agatcaaaaa tggctccagt 3661 gcgcccagca caccaagtac cacgacgggt ggtgccggtg gtcagacaaa tgtccatatt 3721 ttatcagctc cctcaactcc ggccctaagt tcagatgctg gcacaaagga tacaccatcg 3781 aaatcaaatg acttgaatcg atcagcggat aatgcaacac ctaccgggac actgcacacc 3841 atgtcaatgg gcggtggtgg tgttaacagt caagaaacag ataacttgtc caatttgccg 3901 gcaccacaag cccaagtttc gccaacgata ccttcgacga ataatttatc gatgagcgga 3961 gtgcaagaat catcgcaaat gaatttagat gctacagcac cacaacccat agatgtcata 4021 gaggaacaca atcaacagca aaatgaaaat tctgaattga aacaatccaa cgatgtacaa 4081 tcgacaacgc aagctttgag ttataccaat aatgattcgc cctcaaagtc catgaaagct 4141 ccctccagta ctacatcctc ggaggccggg gaaaaatcta ctgccaccct gacagctaat 4201 tttgtttcta cagcgccaga agaggccttg gccacttcgg tggcatcctc tgtggctgct 4261 gtaaacacaa gtacaaccgc gtccagcatg actactacgc cgtcatcaac gacaacctcc 4321 agcactacga catcttgtac ttcgtccacc acaacttcat cgacatttac taccaccagc 4381 actactaaca acagctcttc tcttatctca acgccgacaa ctaaatctgc ggtaggacct 4441 ccaccgaaga caacacccgg tgccacaatt gttaaagtag aaaaagattt gcccaaggct 4501 atgataaaac ccaacgtctt aactcatgtc atcgatggtt tcataatcca ggaagccaat 4561 gaaccattcc ccgtttcaag gaaacgttac acggacaaag atgatagtga tgaattgcca 4621 cagaaaaaac aagcgctgga agactcaacc aacaacaatg gcaacaacaa caccaatgcc 4681 ctggcgacca gccctctacc acccgatatg gtggcatgcg aacaatgtgg caaggctgaa 4741 cataagacaa aattgaaaaa gaaacgttat tgttcaccca cttgtgcccg ccaggctaag 4801 gcttccatgg gtggtcatga acaacaactg cagcagcagc agcagcaaca gaatcaacat 4861 agtgataata atggaggtgt gacagcagct tcattatccc taactaatgc taccaataat 4921 gatggaacat caacgaatgt taataatctt agtaatagca tgtctatgga tataagtcaa 4981 acattggtga cagcagcaac ggctcccatg gtaccggtta atgtgggtat ggttgataca 5041 ccgctagtgg ctgctatgcc catgatggcc gctccaacgc tggccccagc acccgtacaa 5101 ttacctatgc ctgctgctgc tgcggccatt atgaatgatg tggtgggagg tggtggtcaa 5161 caaactgcca atgctcaaat agctgccata cccacagcgg cggccaccat gaatgtggca 5221 cccaatacag ctgccaccac tgccgctacc gccatgatgg atcaacaaca accacaaatg 5281 gccaattgga cggtggcaga tgtttgtgaa tttattaaga atttaccagg atgcacagac 5341 tatgtggatg atttcgaaca gcaagagatt gatggtcagg ctctgctgtt gctcaaagag 5401 aatcacttgg tcaatgccat gggcatgaaa ttggggccgg ctctcaagat tgtggctaaa 5461 gtggaatcaa tgaaagaggt gtcagcggct gctttaaatg ccgccaataa tgctgctaat 5521 aatagcatgg atatgcaata aagaaagaat gagaagaaga cgaattcttc caaatgtata 5581 taatgcgaac gaggaggtgg tagccctttc taacaaacta tcatactcac acaggcacac 5641 taaccagaca ttaaacaaag cattataagc cgagatacat ttacatttat ttagcattat 5701 aattaattga agatggctgt attatataaa cttactaaga gaattttgaa tatagatatt 5761 aactaaagaa atacgcggag ggtgggagta ggggagagaa tgagattcac tttcattggc 5821 aggttaatct tgtgtttgtc aaacatttgc tgaagggata tttcaaatct actgccctcc 5881 cccccacata cactgacaat ttccactaag ttgtaaataa ttattgataa aaaaaaacca 5941 actattcgta ataatacttt taaataatct tatatacata tttttaaatg tctccttctt 6001 cccctctaaa atttgggggt taaaaatcaa ctcttacaag tgtaaatgat tttgtttcca 6061 taccctgggg ttggtggcaa gttgtcatcg ccgacacctc acatcattta agtattccct 6121 tctccatttt ttttttgata ttttttgttt gttttttttt ttatacatac ctctttttta 6181 atagtttaaa ctctatttat ttttcaccct tcctctacta gaggaacaac cttctcccat 6241 acctactatc tttaagatac acatagcatt gtaattagaa aacctttaca aaattgagtt 6301 aaaaaatgtt acgtgttttt tgcgtttttt attttacgat attgctgctc cctctttttt 6361 aaggagtttt caattttatt gcaataaact cagattttgt atggcaagta gagatttttt 6421 attactccct tttttgtaat acaactaccc aaaatacata gacataccgt acaatagaaa 6481 taaacaacaa tgactctttt tttagttttt agtcgagatt ttatgtttct tagttgcata 6541 agtaactttt tttattacat taataattga tgaataaata aattcactgg gaagtgttta 6601 aaacattgta aa