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LOCUS XM_013260293 7168 bp mRNA linear INV 02-SEP-2023 protein (LOC106093251), transcript variant X2, mRNA. ACCESSION XM_013260293 VERSION XM_013260293.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260293.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7168 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7168 /gene="LOC106093251" /note="polyhomeotic-proximal chromatin protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106093251" CDS 575..6097 /gene="LOC106093251" /codon_start=1 /product="polyhomeotic-proximal chromatin protein isoform X1" /protein_id="XP_013115747.2" /db_xref="GeneID:106093251" /translation="MDRHALKVYSRRTTATRESENTTATSNSTYLPTQPLKDNSNIRI IKVNGEQAHLVEQKQQQHHHQSTSSPSTNNSSSSNNNNNNGVTANHLTTAKVGTSTPS TPKAANGGGGNERPLKCLETLAQKAGITFDEKYDFATPTASSPTPPQQQQQYHSSQNT TQQQQSNQLKLQQQQQQHHHHQIQLANLRASSSTTTTSTTNTTPQAHTTSISIVGVGG NVPKSFKLEKSQSPAQQVAPGTVPLQISPEQLQQLQQLQQFHQLQHGPPFAAVQVKQE FPTQHHTLSAGGGGAADLKHTGMLDAATQGQLQQMQLAAAAADANGGVGPNSPANQQN ANNGLQPQHSTTISTMSPMQLATATGQVTAANDWTQGRLQIMQPSTSFIYPHLMLPGN LIHSSLGQQPIQVITAGKTFQGGAPQIVATTQNAKQMSIAGNATFPSGTTYAIPSSQS QQTLLFSPVNVISQSPQQQNMLQVMTQAAANAQQQQQQQQQQQQQQQQQQQQQQKTVD GQKGLQQKVVQKVTTTTNTVQSAAAPNVGQQQQQQAQQQCVQVNSQTAAGMAGGATQI ISPLQQTTGAPQPLQINATPWGVPFWSNGLQQLAQNQIIIRGTQPDGTQGVFIQQPTG PTLQAQQQNQITLQCTQTPTKQRTQLDQLQAATKQQQATGQTHAQQVASAANTQMQVN QQQQQQAANAAAVQQQQQQQAVVAAHLQQQAAVVAAANQRGTTQIMPQTGGAQIRPAS SVSTQTAQNQSLLKQKMRTKQQAVRPALTQMKTEQNTVQQVQQQVVKTQATTVAGLQQ MTAAVAAQQQQQGQPTVHQVVTSGGKQMVVMSAGTPITIQNGQTLQQAVDKQQQQQQQ QQQLQLQQIQKQQQQQQQVLLQQQLLQQQIAQIQLQQQQAVQQQQQQQLQQAAAVQQQ QVGQAQQQQAQIQLQVGSQAFITTQQQQQLQNQIMQQHQHLQQQHQHQQQQQQQQRDS QQQQQQQQAQAGQNIIHQIVVAQSPQQQQQQQQQQQQAQQLQQQITAVPFSVSSSTPA SIATSAGAAMQHVTYQTKTSNSLPTTSVVTISNQTGPLVTSTVGLSQTQLHQQQLIAA TIAASQQQQQQQLQQQQQQQLVAVAQQQQQQQQAQQQQAQQCQQQQTVMPPPSSPAQN PILAMASMMNAAAGGNLNTTSSLSGVANNTAVPMTSPLANSNASVTSVSSLPTTPSKS GADQIKNGSSAPSTPSTTTGGAGGQTNVHILSAPSTPALSSDAGTKDTPSKSNDLNRS ADNATPTGTLHTMSMGGGGVNSQETDNLSNLPAPQAQVSPTIPSTNNLSMSGVQESSQ MNLDATAPQPIDVIEEHNQQQNENSELKQSNDVQSTTQALSYTNNDSPSKSMKAPSST TSSEAGEKSTATLTANFVSTAPEEALATSVASSVAAVNTSTTASSMTTTPSSTTTSST TTSCTSSTTTSSTFTTTSTTNNSSSLISTPTTKSAVGPPPKTTPGATIVKVEKDLPKA MIKPNVLTHVIDGFIIQEANEPFPVSRKRYTDKDDSDELPQKKQALEDSTNNNGNNNT NALATSPLPPDMVACEQCGKAEHKTKLKKKRYCSPTCARQAKASMGGHEQQLQQQQQQ QNQHSDNNGGVTAASLSLTNATNNDGTSTNVNNLSNSMSMDISQTLVTAATAPMVPVN VGMVDTPLVAAMPMMAAPTLAPAPVQLPMPAAAAAIMNDVVGGGGQQTANAQIAAIPT AAATMNVAPNTAATTAATAMMDQQQPQMANWTVADVCEFIKNLPGCTDYVDDFEQQEI DGQALLLLKENHLVNAMGMKLGPALKIVAKVESMKEVSAAALNAANNAANNSMDMQ" polyA_site 7168 /gene="LOC106093251" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atggcaaagt atacacaaaa atattgctaa gcgagtaagc aactcattaa gagagagcag 61 aaaaaccagt ttgtacgaag cgactggtac gatgacagtc cgtacgttta ggtggtgtat 121 gattgtgtgt gctttattca gtatagctga ttttgcttgc tatagagttg ccgtttagta 181 cgtgtttgct tgccttcgag ttcggttgct tcaatttttc ctattctctt tcaatctcgg 241 tgtttggaat gcgttcatac tgtgtgtgtg tgtgttaagt gaacaagaaa caaaatgaaa 301 agaagaagaa aaattacaaa aagagagtga aaccacccga gaaaaaatgt attagcttgg 361 aaaaaacctt ttgcattaat gaaacagaca gcagacatga aatgtgaata atattacgaa 421 gaaataaaaa aattaataaa acaaagaaca aacatacaac aaaacatcat cccataaacc 481 aaaaagaaga aggcaaagaa acaaacaaaa agaaactatg atgttgcatg ctttgataat 541 ttcatttcgt ttaaattcga ttttatttta aacgatggat cgtcatgctt taaaagttta 601 ttcaagaaga actacggcca caagagaaag tgaaaacaca actgcgacat caaactctac 661 ttatttgccc acacaaccct taaaggataa ttccaatata agaataatta aagtcaatgg 721 tgaacaagcg cacttagtag aacaaaaaca acaacaacat catcatcagt caacatcatc 781 ccccagcacc aataacagca gtagcagcaa caacaacaac aacaacggtg ttaccgcaaa 841 ccacttgaca actgcaaaag ttggtacttc aaccccaagc acacccaaag cggcaaacgg 901 cggcggaggc aacgaacgac ccctcaagtg tttagagact ttggcacaaa aggccggtat 961 aacatttgac gaaaaatacg attttgccac gccaacagca tcatcaccca caccaccaca 1021 acaacagcag cagtatcatt catcgcaaaa tacaacacaa caacaacaaa gtaatcaact 1081 gaagttgcaa caacaacagc agcagcatca tcatcatcaa atacaattag ccaatttgcg 1141 cgcatcatcc tccactacca caacctccac cacaaatacc acccctcaag cacacaccac 1201 ttccatttcc attgttggtg tcggcggtaa cgttccgaaa agcttcaagc tggagaagtc 1261 acagagccca gcacaacaag tggcacccgg tacggtgcca ctacagattt cacccgaaca 1321 actacagcag ctacaacagc tacaacaatt ccatcaattg caacatggcc cacccttcgc 1381 agccgtacaa gtcaaacagg agtttcccac acaacatcat accttgtcgg cgggaggcgg 1441 cggcgcagcc gatcttaaac atacgggcat gctggatgct gccacacagg gccagttaca 1501 gcaaatgcag ttagccgctg cggcggctga tgccaatggc ggtgttggcc ccaatagccc 1561 ggcaaatcaa caaaacgcaa ataatggtct gcagccgcaa cattcaacca ccataagcac 1621 tatgtcaccc atgcaattgg ccaccgccac aggacaagtg actgcagcga atgattggac 1681 tcagggacgc ctgcaaatca tgcaaccatc tacgagtttc atctatcccc atttaatgct 1741 gccgggcaat ctgattcatt cgagcttagg tcaacagccc atacaggtca ttacggcggg 1801 aaaaactttt cagggtgggg ctcctcaaat tgttgccact acacagaatg ctaagcaaat 1861 gtccattgcg ggcaatgcta cctttcctag tggtaccacc tatgccatac cctccagtca 1921 atcacaacag acgctactat tctcaccagt taatgttatt tcacaatcac cgcagcaaca 1981 gaatatgctg caggtaatga cacaggctgc tgcgaatgcc caacagcagc agcagcaaca 2041 acaacagcag cagcaacaac aacaacagca acagcagcaa caacagaaaa ccgtagatgg 2101 tcaaaagggt ttgcaacaga aggtggtgca aaaggttacg accaccacaa acacagtgca 2161 gtcagctgca gctcccaatg ttggccaaca gcagcaacaa caagcccaac aacagtgcgt 2221 ccaagtaaat tcccagactg ctgctggtat ggcgggtgga gctactcaaa tcataagtcc 2281 cttacaacag actacgggag cgcctcagcc attgcagata aatgccacac catggggggt 2341 accattctgg tcaaatggtt tgcagcaatt ggcacagaat caaattataa ttcggggcac 2401 acaacccgat ggaacgcagg gtgtgtttat acaacagccc acagggccga cgttgcaagc 2461 ccaacaacag aatcaaatca ccctacaatg cactcaaaca cccaccaaac aacgaacgca 2521 actcgatcag ttgcaagccg ctacaaagca acaacaagcc acggggcaaa cgcatgccca 2581 acaagtggcc agtgctgcca acactcaaat gcaagtcaac caacaacaac agcaacaagc 2641 ggctaacgct gctgcagtgc aacaacaaca gcagcagcag gctgtagtag cagctcactt 2701 gcaacaacaa gctgctgttg tggctgccgc caatcagagg ggcaccacac aaattatgcc 2761 ccaaaccgga ggtgcccaaa tacgaccggc ttcttcggtt tctacgcaga cggctcaaaa 2821 tcaaagtttg cttaagcaaa aaatgcgcac caagcaacag gcagtacggc cggctctgac 2881 gcaaatgaaa accgaacaga atacagtgca acaagtgcag cagcaggttg taaaaaccca 2941 agcgaccacc gtggccggtc tgcaacaaat gacagcggct gtggccgccc agcagcaaca 3001 acaaggacaa cccacagtac atcaggtggt cacgtccggt ggcaagcaga tggtggtgat 3061 gagtgctggc accccaatca ccatacagaa tggccaaacc ttgcaacagg ctgttgacaa 3121 gcagcagcaa caacaacagc agcaacagca attgcagtta caacaaatac agaagcaaca 3181 gcagcagcaa caacaagttt tgttgcaaca gcaattgctt caacagcaaa tcgctcaaat 3241 ccaattgcaa caacagcagg cagtgcaaca gcaacaacaa cagcagctgc aacaagctgc 3301 ggccgttcaa cagcagcaag ttggtcaggc tcaacaacaa caggcgcaaa ttcagcttca 3361 ggttgggtca caagccttca taaccaccca gcaacagcag caattgcaaa atcaaattat 3421 gcaacagcac cagcacttgc aacaacaaca ccaacaccaa cagcaacaac agcagcagca 3481 gcgcgactcc cagcagcaac aacaacagca gcaggcgcaa gcgggccaaa atatcataca 3541 tcaaatagtg gtggctcaat cgccgcagca gcagcagcaa caacaacaac agcagcagca 3601 ggcgcaacag cttcagcagc aaatcacagc agttcccttc tcggtgtcgt cttcgacacc 3661 cgcctctata gccacgtcgg ctggtgccgc catgcaacat gtgacgtatc aaactaaaac 3721 atccaattca ctaccaacca catcggtcgt aacgatttcc aatcaaactg gacctttggt 3781 caccagtact gtgggtttga gtcagaccca attgcatcaa caacagttaa tagcggctac 3841 gattgctgcc tcacagcaac aacaacagca acagttgcaa cagcagcaac aacaacaatt 3901 agtggctgtg gctcaacaac aacagcagca gcagcaagca caacaacaac aagctcaaca 3961 atgtcagcaa caacagacgg ttatgccacc accatcatct cctgctcaga atcccatact 4021 agccatggcc tccatgatga atgccgctgc tggcggcaac ctaaatacca cctcatcctt 4081 gagtggtgta gccaacaata ccgcagtccc catgacctca cccttggcta atagcaatgc 4141 cagcgttaca agtgtctcat ccctgcccac tacaccctca aagagcggtg cggatcagat 4201 caaaaatggc tccagtgcgc ccagcacacc aagtaccacg acgggtggtg ccggtggtca 4261 gacaaatgtc catattttat cagctccctc aactccggcc ctaagttcag atgctggcac 4321 aaaggataca ccatcgaaat caaatgactt gaatcgatca gcggataatg caacacctac 4381 cgggacactg cacaccatgt caatgggcgg tggtggtgtt aacagtcaag aaacagataa 4441 cttgtccaat ttgccggcac cacaagccca agtttcgcca acgatacctt cgacgaataa 4501 tttatcgatg agcggagtgc aagaatcatc gcaaatgaat ttagatgcta cagcaccaca 4561 acccatagat gtcatagagg aacacaatca acagcaaaat gaaaattctg aattgaaaca 4621 atccaacgat gtacaatcga caacgcaagc tttgagttat accaataatg attcgccctc 4681 aaagtccatg aaagctccct ccagtactac atcctcggag gccggggaaa aatctactgc 4741 caccctgaca gctaattttg tttctacagc gccagaagag gccttggcca cttcggtggc 4801 atcctctgtg gctgctgtaa acacaagtac aaccgcgtcc agcatgacta ctacgccgtc 4861 atcaacgaca acctccagca ctacgacatc ttgtacttcg tccaccacaa cttcatcgac 4921 atttactacc accagcacta ctaacaacag ctcttctctt atctcaacgc cgacaactaa 4981 atctgcggta ggacctccac cgaagacaac acccggtgcc acaattgtta aagtagaaaa 5041 agatttgccc aaggctatga taaaacccaa cgtcttaact catgtcatcg atggtttcat 5101 aatccaggaa gccaatgaac cattccccgt ttcaaggaaa cgttacacgg acaaagatga 5161 tagtgatgaa ttgccacaga aaaaacaagc gctggaagac tcaaccaaca acaatggcaa 5221 caacaacacc aatgccctgg cgaccagccc tctaccaccc gatatggtgg catgcgaaca 5281 atgtggcaag gctgaacata agacaaaatt gaaaaagaaa cgttattgtt cacccacttg 5341 tgcccgccag gctaaggctt ccatgggtgg tcatgaacaa caactgcagc agcagcagca 5401 gcaacagaat caacatagtg ataataatgg aggtgtgaca gcagcttcat tatccctaac 5461 taatgctacc aataatgatg gaacatcaac gaatgttaat aatcttagta atagcatgtc 5521 tatggatata agtcaaacat tggtgacagc agcaacggct cccatggtac cggttaatgt 5581 gggtatggtt gatacaccgc tagtggctgc tatgcccatg atggccgctc caacgctggc 5641 cccagcaccc gtacaattac ctatgcctgc tgctgctgcg gccattatga atgatgtggt 5701 gggaggtggt ggtcaacaaa ctgccaatgc tcaaatagct gccataccca cagcggcggc 5761 caccatgaat gtggcaccca atacagctgc caccactgcc gctaccgcca tgatggatca 5821 acaacaacca caaatggcca attggacggt ggcagatgtt tgtgaattta ttaagaattt 5881 accaggatgc acagactatg tggatgattt cgaacagcaa gagattgatg gtcaggctct 5941 gctgttgctc aaagagaatc acttggtcaa tgccatgggc atgaaattgg ggccggctct 6001 caagattgtg gctaaagtgg aatcaatgaa agaggtgtca gcggctgctt taaatgccgc 6061 caataatgct gctaataata gcatggatat gcaataaaga aagaatgaga agaagacgaa 6121 ttcttccaaa tgtatataat gcgaacgagg aggtggtagc cctttctaac aaactatcat 6181 actcacacag gcacactaac cagacattaa acaaagcatt ataagccgag atacatttac 6241 atttatttag cattataatt aattgaagat ggctgtatta tataaactta ctaagagaat 6301 tttgaatata gatattaact aaagaaatac gcggagggtg ggagtagggg agagaatgag 6361 attcactttc attggcaggt taatcttgtg tttgtcaaac atttgctgaa gggatatttc 6421 aaatctactg ccctcccccc cacatacact gacaatttcc actaagttgt aaataattat 6481 tgataaaaaa aaaccaacta ttcgtaataa tacttttaaa taatcttata tacatatttt 6541 taaatgtctc cttcttcccc tctaaaattt gggggttaaa aatcaactct tacaagtgta 6601 aatgattttg tttccatacc ctggggttgg tggcaagttg tcatcgccga cacctcacat 6661 catttaagta ttcccttctc catttttttt ttgatatttt ttgtttgttt ttttttttat 6721 acatacctct tttttaatag tttaaactct atttattttt cacccttcct ctactagagg 6781 aacaaccttc tcccatacct actatcttta agatacacat agcattgtaa ttagaaaacc 6841 tttacaaaat tgagttaaaa aatgttacgt gttttttgcg ttttttattt tacgatattg 6901 ctgctccctc ttttttaagg agttttcaat tttattgcaa taaactcaga ttttgtatgg 6961 caagtagaga ttttttatta ctcccttttt tgtaatacaa ctacccaaaa tacatagaca 7021 taccgtacaa tagaaataaa caacaatgac tcttttttta gtttttagtc gagattttat 7081 gtttcttagt tgcataagta acttttttta ttacattaat aattgatgaa taaataaatt 7141 cactgggaag tgtttaaaac attgtaaa