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LOCUS XM_013260291 7303 bp mRNA linear INV 02-SEP-2023 protein (LOC106093251), transcript variant X1, mRNA. ACCESSION XM_013260291 VERSION XM_013260291.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260291.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7303 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7303 /gene="LOC106093251" /note="polyhomeotic-proximal chromatin protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106093251" CDS 710..6232 /gene="LOC106093251" /codon_start=1 /product="polyhomeotic-proximal chromatin protein isoform X1" /protein_id="XP_013115745.2" /db_xref="GeneID:106093251" /translation="MDRHALKVYSRRTTATRESENTTATSNSTYLPTQPLKDNSNIRI IKVNGEQAHLVEQKQQQHHHQSTSSPSTNNSSSSNNNNNNGVTANHLTTAKVGTSTPS TPKAANGGGGNERPLKCLETLAQKAGITFDEKYDFATPTASSPTPPQQQQQYHSSQNT TQQQQSNQLKLQQQQQQHHHHQIQLANLRASSSTTTTSTTNTTPQAHTTSISIVGVGG NVPKSFKLEKSQSPAQQVAPGTVPLQISPEQLQQLQQLQQFHQLQHGPPFAAVQVKQE FPTQHHTLSAGGGGAADLKHTGMLDAATQGQLQQMQLAAAAADANGGVGPNSPANQQN ANNGLQPQHSTTISTMSPMQLATATGQVTAANDWTQGRLQIMQPSTSFIYPHLMLPGN LIHSSLGQQPIQVITAGKTFQGGAPQIVATTQNAKQMSIAGNATFPSGTTYAIPSSQS QQTLLFSPVNVISQSPQQQNMLQVMTQAAANAQQQQQQQQQQQQQQQQQQQQQQKTVD GQKGLQQKVVQKVTTTTNTVQSAAAPNVGQQQQQQAQQQCVQVNSQTAAGMAGGATQI ISPLQQTTGAPQPLQINATPWGVPFWSNGLQQLAQNQIIIRGTQPDGTQGVFIQQPTG PTLQAQQQNQITLQCTQTPTKQRTQLDQLQAATKQQQATGQTHAQQVASAANTQMQVN QQQQQQAANAAAVQQQQQQQAVVAAHLQQQAAVVAAANQRGTTQIMPQTGGAQIRPAS SVSTQTAQNQSLLKQKMRTKQQAVRPALTQMKTEQNTVQQVQQQVVKTQATTVAGLQQ MTAAVAAQQQQQGQPTVHQVVTSGGKQMVVMSAGTPITIQNGQTLQQAVDKQQQQQQQ QQQLQLQQIQKQQQQQQQVLLQQQLLQQQIAQIQLQQQQAVQQQQQQQLQQAAAVQQQ QVGQAQQQQAQIQLQVGSQAFITTQQQQQLQNQIMQQHQHLQQQHQHQQQQQQQQRDS QQQQQQQQAQAGQNIIHQIVVAQSPQQQQQQQQQQQQAQQLQQQITAVPFSVSSSTPA SIATSAGAAMQHVTYQTKTSNSLPTTSVVTISNQTGPLVTSTVGLSQTQLHQQQLIAA TIAASQQQQQQQLQQQQQQQLVAVAQQQQQQQQAQQQQAQQCQQQQTVMPPPSSPAQN PILAMASMMNAAAGGNLNTTSSLSGVANNTAVPMTSPLANSNASVTSVSSLPTTPSKS GADQIKNGSSAPSTPSTTTGGAGGQTNVHILSAPSTPALSSDAGTKDTPSKSNDLNRS ADNATPTGTLHTMSMGGGGVNSQETDNLSNLPAPQAQVSPTIPSTNNLSMSGVQESSQ MNLDATAPQPIDVIEEHNQQQNENSELKQSNDVQSTTQALSYTNNDSPSKSMKAPSST TSSEAGEKSTATLTANFVSTAPEEALATSVASSVAAVNTSTTASSMTTTPSSTTTSST TTSCTSSTTTSSTFTTTSTTNNSSSLISTPTTKSAVGPPPKTTPGATIVKVEKDLPKA MIKPNVLTHVIDGFIIQEANEPFPVSRKRYTDKDDSDELPQKKQALEDSTNNNGNNNT NALATSPLPPDMVACEQCGKAEHKTKLKKKRYCSPTCARQAKASMGGHEQQLQQQQQQ QNQHSDNNGGVTAASLSLTNATNNDGTSTNVNNLSNSMSMDISQTLVTAATAPMVPVN VGMVDTPLVAAMPMMAAPTLAPAPVQLPMPAAAAAIMNDVVGGGGQQTANAQIAAIPT AAATMNVAPNTAATTAATAMMDQQQPQMANWTVADVCEFIKNLPGCTDYVDDFEQQEI DGQALLLLKENHLVNAMGMKLGPALKIVAKVESMKEVSAAALNAANNAANNSMDMQ" polyA_site 7303 /gene="LOC106093251" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaacatacc tttttaataa atataattaa agttatcaat aagaagttat aaaaaaacgg 61 cccaaagacc tcgcagagaa aaaggctaat aagtggccat gaataagttt acataagtgc 121 actagcagca gcagtagtct tcaattgtcg ccccagcata tcattattac cacccgagct 181 tgctcaccaa cattagcggc atccctatta taaatttaat aaattcgcag tgctcctcta 241 tatctataag atagtccgaa agcaggtgct gcaatttaat tttatatttc ttgcgataaa 301 gcttaatgtt tgtaccataa aataatgcca tataaaaaat tattggattg aaatcaatct 361 ctggtctgca ccactacaca caccaacgac ccatcacact ataaaaaaaa aacacttttt 421 tgttgtcggt aacaaagcat tcgactgccg cagcagatat acccaacata cttacatatt 481 tgcttcttct ttgaaaataa cccttttgca ttaatgaaac agacagcaga catgaaatgt 541 gaataatatt acgaagaaat aaaaaaatta ataaaacaaa gaacaaacat acaacaaaac 601 atcatcccat aaaccaaaaa gaagaaggca aagaaacaaa caaaaagaaa ctatgatgtt 661 gcatgctttg ataatttcat ttcgtttaaa ttcgatttta ttttaaacga tggatcgtca 721 tgctttaaaa gtttattcaa gaagaactac ggccacaaga gaaagtgaaa acacaactgc 781 gacatcaaac tctacttatt tgcccacaca acccttaaag gataattcca atataagaat 841 aattaaagtc aatggtgaac aagcgcactt agtagaacaa aaacaacaac aacatcatca 901 tcagtcaaca tcatccccca gcaccaataa cagcagtagc agcaacaaca acaacaacaa 961 cggtgttacc gcaaaccact tgacaactgc aaaagttggt acttcaaccc caagcacacc 1021 caaagcggca aacggcggcg gaggcaacga acgacccctc aagtgtttag agactttggc 1081 acaaaaggcc ggtataacat ttgacgaaaa atacgatttt gccacgccaa cagcatcatc 1141 acccacacca ccacaacaac agcagcagta tcattcatcg caaaatacaa cacaacaaca 1201 acaaagtaat caactgaagt tgcaacaaca acagcagcag catcatcatc atcaaataca 1261 attagccaat ttgcgcgcat catcctccac taccacaacc tccaccacaa ataccacccc 1321 tcaagcacac accacttcca tttccattgt tggtgtcggc ggtaacgttc cgaaaagctt 1381 caagctggag aagtcacaga gcccagcaca acaagtggca cccggtacgg tgccactaca 1441 gatttcaccc gaacaactac agcagctaca acagctacaa caattccatc aattgcaaca 1501 tggcccaccc ttcgcagccg tacaagtcaa acaggagttt cccacacaac atcatacctt 1561 gtcggcggga ggcggcggcg cagccgatct taaacatacg ggcatgctgg atgctgccac 1621 acagggccag ttacagcaaa tgcagttagc cgctgcggcg gctgatgcca atggcggtgt 1681 tggccccaat agcccggcaa atcaacaaaa cgcaaataat ggtctgcagc cgcaacattc 1741 aaccaccata agcactatgt cacccatgca attggccacc gccacaggac aagtgactgc 1801 agcgaatgat tggactcagg gacgcctgca aatcatgcaa ccatctacga gtttcatcta 1861 tccccattta atgctgccgg gcaatctgat tcattcgagc ttaggtcaac agcccataca 1921 ggtcattacg gcgggaaaaa cttttcaggg tggggctcct caaattgttg ccactacaca 1981 gaatgctaag caaatgtcca ttgcgggcaa tgctaccttt cctagtggta ccacctatgc 2041 cataccctcc agtcaatcac aacagacgct actattctca ccagttaatg ttatttcaca 2101 atcaccgcag caacagaata tgctgcaggt aatgacacag gctgctgcga atgcccaaca 2161 gcagcagcag caacaacaac agcagcagca acaacaacaa cagcaacagc agcaacaaca 2221 gaaaaccgta gatggtcaaa agggtttgca acagaaggtg gtgcaaaagg ttacgaccac 2281 cacaaacaca gtgcagtcag ctgcagctcc caatgttggc caacagcagc aacaacaagc 2341 ccaacaacag tgcgtccaag taaattccca gactgctgct ggtatggcgg gtggagctac 2401 tcaaatcata agtcccttac aacagactac gggagcgcct cagccattgc agataaatgc 2461 cacaccatgg ggggtaccat tctggtcaaa tggtttgcag caattggcac agaatcaaat 2521 tataattcgg ggcacacaac ccgatggaac gcagggtgtg tttatacaac agcccacagg 2581 gccgacgttg caagcccaac aacagaatca aatcacccta caatgcactc aaacacccac 2641 caaacaacga acgcaactcg atcagttgca agccgctaca aagcaacaac aagccacggg 2701 gcaaacgcat gcccaacaag tggccagtgc tgccaacact caaatgcaag tcaaccaaca 2761 acaacagcaa caagcggcta acgctgctgc agtgcaacaa caacagcagc agcaggctgt 2821 agtagcagct cacttgcaac aacaagctgc tgttgtggct gccgccaatc agaggggcac 2881 cacacaaatt atgccccaaa ccggaggtgc ccaaatacga ccggcttctt cggtttctac 2941 gcagacggct caaaatcaaa gtttgcttaa gcaaaaaatg cgcaccaagc aacaggcagt 3001 acggccggct ctgacgcaaa tgaaaaccga acagaataca gtgcaacaag tgcagcagca 3061 ggttgtaaaa acccaagcga ccaccgtggc cggtctgcaa caaatgacag cggctgtggc 3121 cgcccagcag caacaacaag gacaacccac agtacatcag gtggtcacgt ccggtggcaa 3181 gcagatggtg gtgatgagtg ctggcacccc aatcaccata cagaatggcc aaaccttgca 3241 acaggctgtt gacaagcagc agcaacaaca acagcagcaa cagcaattgc agttacaaca 3301 aatacagaag caacagcagc agcaacaaca agttttgttg caacagcaat tgcttcaaca 3361 gcaaatcgct caaatccaat tgcaacaaca gcaggcagtg caacagcaac aacaacagca 3421 gctgcaacaa gctgcggccg ttcaacagca gcaagttggt caggctcaac aacaacaggc 3481 gcaaattcag cttcaggttg ggtcacaagc cttcataacc acccagcaac agcagcaatt 3541 gcaaaatcaa attatgcaac agcaccagca cttgcaacaa caacaccaac accaacagca 3601 acaacagcag cagcagcgcg actcccagca gcaacaacaa cagcagcagg cgcaagcggg 3661 ccaaaatatc atacatcaaa tagtggtggc tcaatcgccg cagcagcagc agcaacaaca 3721 acaacagcag cagcaggcgc aacagcttca gcagcaaatc acagcagttc ccttctcggt 3781 gtcgtcttcg acacccgcct ctatagccac gtcggctggt gccgccatgc aacatgtgac 3841 gtatcaaact aaaacatcca attcactacc aaccacatcg gtcgtaacga tttccaatca 3901 aactggacct ttggtcacca gtactgtggg tttgagtcag acccaattgc atcaacaaca 3961 gttaatagcg gctacgattg ctgcctcaca gcaacaacaa cagcaacagt tgcaacagca 4021 gcaacaacaa caattagtgg ctgtggctca acaacaacag cagcagcagc aagcacaaca 4081 acaacaagct caacaatgtc agcaacaaca gacggttatg ccaccaccat catctcctgc 4141 tcagaatccc atactagcca tggcctccat gatgaatgcc gctgctggcg gcaacctaaa 4201 taccacctca tccttgagtg gtgtagccaa caataccgca gtccccatga cctcaccctt 4261 ggctaatagc aatgccagcg ttacaagtgt ctcatccctg cccactacac cctcaaagag 4321 cggtgcggat cagatcaaaa atggctccag tgcgcccagc acaccaagta ccacgacggg 4381 tggtgccggt ggtcagacaa atgtccatat tttatcagct ccctcaactc cggccctaag 4441 ttcagatgct ggcacaaagg atacaccatc gaaatcaaat gacttgaatc gatcagcgga 4501 taatgcaaca cctaccggga cactgcacac catgtcaatg ggcggtggtg gtgttaacag 4561 tcaagaaaca gataacttgt ccaatttgcc ggcaccacaa gcccaagttt cgccaacgat 4621 accttcgacg aataatttat cgatgagcgg agtgcaagaa tcatcgcaaa tgaatttaga 4681 tgctacagca ccacaaccca tagatgtcat agaggaacac aatcaacagc aaaatgaaaa 4741 ttctgaattg aaacaatcca acgatgtaca atcgacaacg caagctttga gttataccaa 4801 taatgattcg ccctcaaagt ccatgaaagc tccctccagt actacatcct cggaggccgg 4861 ggaaaaatct actgccaccc tgacagctaa ttttgtttct acagcgccag aagaggcctt 4921 ggccacttcg gtggcatcct ctgtggctgc tgtaaacaca agtacaaccg cgtccagcat 4981 gactactacg ccgtcatcaa cgacaacctc cagcactacg acatcttgta cttcgtccac 5041 cacaacttca tcgacattta ctaccaccag cactactaac aacagctctt ctcttatctc 5101 aacgccgaca actaaatctg cggtaggacc tccaccgaag acaacacccg gtgccacaat 5161 tgttaaagta gaaaaagatt tgcccaaggc tatgataaaa cccaacgtct taactcatgt 5221 catcgatggt ttcataatcc aggaagccaa tgaaccattc cccgtttcaa ggaaacgtta 5281 cacggacaaa gatgatagtg atgaattgcc acagaaaaaa caagcgctgg aagactcaac 5341 caacaacaat ggcaacaaca acaccaatgc cctggcgacc agccctctac cacccgatat 5401 ggtggcatgc gaacaatgtg gcaaggctga acataagaca aaattgaaaa agaaacgtta 5461 ttgttcaccc acttgtgccc gccaggctaa ggcttccatg ggtggtcatg aacaacaact 5521 gcagcagcag cagcagcaac agaatcaaca tagtgataat aatggaggtg tgacagcagc 5581 ttcattatcc ctaactaatg ctaccaataa tgatggaaca tcaacgaatg ttaataatct 5641 tagtaatagc atgtctatgg atataagtca aacattggtg acagcagcaa cggctcccat 5701 ggtaccggtt aatgtgggta tggttgatac accgctagtg gctgctatgc ccatgatggc 5761 cgctccaacg ctggccccag cacccgtaca attacctatg cctgctgctg ctgcggccat 5821 tatgaatgat gtggtgggag gtggtggtca acaaactgcc aatgctcaaa tagctgccat 5881 acccacagcg gcggccacca tgaatgtggc acccaataca gctgccacca ctgccgctac 5941 cgccatgatg gatcaacaac aaccacaaat ggccaattgg acggtggcag atgtttgtga 6001 atttattaag aatttaccag gatgcacaga ctatgtggat gatttcgaac agcaagagat 6061 tgatggtcag gctctgctgt tgctcaaaga gaatcacttg gtcaatgcca tgggcatgaa 6121 attggggccg gctctcaaga ttgtggctaa agtggaatca atgaaagagg tgtcagcggc 6181 tgctttaaat gccgccaata atgctgctaa taatagcatg gatatgcaat aaagaaagaa 6241 tgagaagaag acgaattctt ccaaatgtat ataatgcgaa cgaggaggtg gtagcccttt 6301 ctaacaaact atcatactca cacaggcaca ctaaccagac attaaacaaa gcattataag 6361 ccgagataca tttacattta tttagcatta taattaattg aagatggctg tattatataa 6421 acttactaag agaattttga atatagatat taactaaaga aatacgcgga gggtgggagt 6481 aggggagaga atgagattca ctttcattgg caggttaatc ttgtgtttgt caaacatttg 6541 ctgaagggat atttcaaatc tactgccctc ccccccacat acactgacaa tttccactaa 6601 gttgtaaata attattgata aaaaaaaacc aactattcgt aataatactt ttaaataatc 6661 ttatatacat atttttaaat gtctccttct tcccctctaa aatttggggg ttaaaaatca 6721 actcttacaa gtgtaaatga ttttgtttcc ataccctggg gttggtggca agttgtcatc 6781 gccgacacct cacatcattt aagtattccc ttctccattt tttttttgat attttttgtt 6841 tgtttttttt tttatacata cctctttttt aatagtttaa actctattta tttttcaccc 6901 ttcctctact agaggaacaa ccttctccca tacctactat ctttaagata cacatagcat 6961 tgtaattaga aaacctttac aaaattgagt taaaaaatgt tacgtgtttt ttgcgttttt 7021 tattttacga tattgctgct ccctcttttt taaggagttt tcaattttat tgcaataaac 7081 tcagattttg tatggcaagt agagattttt tattactccc ttttttgtaa tacaactacc 7141 caaaatacat agacataccg tacaatagaa ataaacaaca atgactcttt ttttagtttt 7201 tagtcgagat tttatgtttc ttagttgcat aagtaacttt ttttattaca ttaataattg 7261 atgaataaat aaattcactg ggaagtgttt aaaacattgt aaa